Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300951

Identifier: 146300951

GI number: 146300951

Start: 3823836

End: 3824288

Strand: Reverse

Name: 146300951

Synonym: Fjoh_3206

Alternate gene names: NA

Gene position: 3824288-3823836 (Counterclockwise)

Preceding gene: 146300952

Following gene: 146300948

Centisome position: 62.73

GC content: 35.1

Gene sequence:

>453_bases
ATGAAGAGCAAAATTATTTTTTTAAGTGTCCTTTTCTTCTTGACAACGGCAGCTGTTTCGGCACAGGCAAAAAATGCCCC
AAGAAGTATCATCAGTACAACAGCCTTAATCCGTAAATACCACGATCAAAAAGAATTGAGCGGTATGCAAAAAGGAGAAC
TATTGGAATTGTACATTGAGCGTATTAAAGTTTTAGTTAAAACGCTTCCTTATATCGCTTTGGTTACTAAACCTGGTGTT
ACGATGGCAGATTTAGGTATTCCAGACGATGGAGATCACAAAAAAATATTAGACAATCAAGCGGTTGGAACATCAACTTT
CTTAGATACTACAGTAGAGTTTCAAAGAAAAATGATGCCTTACTCTGATAAAGGAAACCTTATCGCGGCGATTTTATTCT
ACGAAAACACATTAAAATCTTTACACGAGTTTAATGAATTAAACGAAATGTAA

Upstream 100 bases:

>100_bases
CAATTGTTAAAGTTTTCTAAAAAAAAGAAAATAATAAAGTTGCAATTTAACTTAATTTGCATATTTTTGCCCTAACCAAG
AACCTATTAGATCTACGAAA

Downstream 100 bases:

>100_bases
TATTTTTTATAAAGCAAAAATAAAACCTTCAAAGTCAATTGATTTTGAAGGTTTTTTTTATGATTAAGCTTTTTGAAATC
TTAAAATAATTCAAGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKSKIIFLSVLFFLTTAAVSAQAKNAPRSIISTTALIRKYHDQKELSGMQKGELLELYIERIKVLVKTLPYIALVTKPGV
TMADLGIPDDGDHKKILDNQAVGTSTFLDTTVEFQRKMMPYSDKGNLIAAILFYENTLKSLHEFNELNEM

Sequences:

>Translated_150_residues
MKSKIIFLSVLFFLTTAAVSAQAKNAPRSIISTTALIRKYHDQKELSGMQKGELLELYIERIKVLVKTLPYIALVTKPGV
TMADLGIPDDGDHKKILDNQAVGTSTFLDTTVEFQRKMMPYSDKGNLIAAILFYENTLKSLHEFNELNEM
>Mature_150_residues
MKSKIIFLSVLFFLTTAAVSAQAKNAPRSIISTTALIRKYHDQKELSGMQKGELLELYIERIKVLVKTLPYIALVTKPGV
TMADLGIPDDGDHKKILDNQAVGTSTFLDTTVEFQRKMMPYSDKGNLIAAILFYENTLKSLHEFNELNEM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16855; Mature: 16855

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKIIFLSVLFFLTTAAVSAQAKNAPRSIISTTALIRKYHDQKELSGMQKGELLELYIE
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RIKVLVKTLPYIALVTKPGVTMADLGIPDDGDHKKILDNQAVGTSTFLDTTVEFQRKMMP
HHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCC
YSDKGNLIAAILFYENTLKSLHEFNELNEM
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSKIIFLSVLFFLTTAAVSAQAKNAPRSIISTTALIRKYHDQKELSGMQKGELLELYIE
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RIKVLVKTLPYIALVTKPGVTMADLGIPDDGDHKKILDNQAVGTSTFLDTTVEFQRKMMP
HHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCC
YSDKGNLIAAILFYENTLKSLHEFNELNEM
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA