| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300950
Identifier: 146300950
GI number: 146300950
Start: 3822535
End: 3823755
Strand: Direct
Name: 146300950
Synonym: Fjoh_3205
Alternate gene names: NA
Gene position: 3822535-3823755 (Clockwise)
Preceding gene: 146300949
Following gene: 146300954
Centisome position: 62.7
GC content: 37.67
Gene sequence:
>1221_bases ATGAAACGTTCCGGTACAGCAGATCTTCCATTACATTATGGACAAGTGCCGTTATGGCTTTCTGAACGAATGTCTAAGCT TGGCCTGGCAATTGTAGAAACGATTGCTTTAGAATTTTCTACTTCTGAAGTGATAAGCAAACTAAGCAATCCGTTTTGGT TTCAAAGTTTTGGAGCTGTTATGGGAATGGACTGGCATTCATCCGGAATTACTACTTCTGTACTTGGTGCCTTAAAAAAA TCTGTCAATCCGCATTCAAAAGAACTTGGAATTTACATTTGCGGAGGAAAAGGCAAACATTCGCTTTTAACTCCTCAAGA ACTTTTATTTGTAGGCGAAAAAACAGGGCTTGACGGAAATAACCTTGCAAACTGCAGTAAACTTGCTGCTAAAGTAGATA ATACAGCCATTCAGGATGGTTTTCAATTGTATCAGCATAATTTTATTGTTGATAATATGGGACAATGGGCTGTCATTCAG CAGGGAATGAACCCCGATTCTAAAACTGCCAGAAGATATCATTGGCATTCACAGGATTTAAAATCTTTTATTGAAGAGCC TCATACCTTTATTTATGGAGAAAATCAGGGAACAATTTTAAACCTTACCGCTCAGGCTGCCTCAAAATCCAGAGAAGGAA TTTTAGAATTATCTAAAGAATCTCCTGCAAAAATCATGAAGGAAATGCAGTATCTTTCTATGCCTGCACATCATGACGTG AGAATGGAAGATGTAAACATGAAAAGACTTGGTGCAATGCTTTGGGCAACACACGAAAATAAACCTGAGGATTTTGAAGA ATTACTGCTTTTAAAAGGAATGGGACCAAGAGCTTTACAATCACTCGCATTAGTGAGCGAAGTTATTTACGGCACTCCTA CCCGATTTGAAGATCCTGCGCGCTTTTCATTTGCACACGGAGGTAAAGACGGACATCCGTTTCCGGTTCCTGTAACTATA TATGATGAAACTATAAATACATTACAACGGGCAATTAACCGGGCTAAAATTGGCAATGGCGACAAGATTGAAGCAATTAA AAAATTATCTGAAATATCCAGAAAAGCGGAACAGAGTTTTACGCCCAATTCTAATTTTGATGCTTTGATTCAAAAAGAAC GAAACGAATCGTATAAATATGGAGGAAAAACAGTTTTTGGCGATGCCAAACCTCCTAAAAAAAGACCTCCAAATACAAAT AATCAGCTTGAATTATTTTAA
Upstream 100 bases:
>100_bases GTTAAAAAGAGAATGGGAAGAACGAAAGTAATCAAGGCTTTGAATGGCAAACGATTAATAAAAGTTTTTTTTCGTAATTT TGTAAAAATTCAATACTCCC
Downstream 100 bases:
>100_bases GATTTCAAAAAGCTTAATCATAAAAAAAACCTTCAAAATCAATTGACTTTGAAGGTTTTATTTTTGCTTTATAAAAAATA TTACATTTCGTTTAATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKRSGTADLPLHYGQVPLWLSERMSKLGLAIVETIALEFSTSEVISKLSNPFWFQSFGAVMGMDWHSSGITTSVLGALKK SVNPHSKELGIYICGGKGKHSLLTPQELLFVGEKTGLDGNNLANCSKLAAKVDNTAIQDGFQLYQHNFIVDNMGQWAVIQ QGMNPDSKTARRYHWHSQDLKSFIEEPHTFIYGENQGTILNLTAQAASKSREGILELSKESPAKIMKEMQYLSMPAHHDV RMEDVNMKRLGAMLWATHENKPEDFEELLLLKGMGPRALQSLALVSEVIYGTPTRFEDPARFSFAHGGKDGHPFPVPVTI YDETINTLQRAINRAKIGNGDKIEAIKKLSEISRKAEQSFTPNSNFDALIQKERNESYKYGGKTVFGDAKPPKKRPPNTN NQLELF
Sequences:
>Translated_406_residues MKRSGTADLPLHYGQVPLWLSERMSKLGLAIVETIALEFSTSEVISKLSNPFWFQSFGAVMGMDWHSSGITTSVLGALKK SVNPHSKELGIYICGGKGKHSLLTPQELLFVGEKTGLDGNNLANCSKLAAKVDNTAIQDGFQLYQHNFIVDNMGQWAVIQ QGMNPDSKTARRYHWHSQDLKSFIEEPHTFIYGENQGTILNLTAQAASKSREGILELSKESPAKIMKEMQYLSMPAHHDV RMEDVNMKRLGAMLWATHENKPEDFEELLLLKGMGPRALQSLALVSEVIYGTPTRFEDPARFSFAHGGKDGHPFPVPVTI YDETINTLQRAINRAKIGNGDKIEAIKKLSEISRKAEQSFTPNSNFDALIQKERNESYKYGGKTVFGDAKPPKKRPPNTN NQLELF >Mature_406_residues MKRSGTADLPLHYGQVPLWLSERMSKLGLAIVETIALEFSTSEVISKLSNPFWFQSFGAVMGMDWHSSGITTSVLGALKK SVNPHSKELGIYICGGKGKHSLLTPQELLFVGEKTGLDGNNLANCSKLAAKVDNTAIQDGFQLYQHNFIVDNMGQWAVIQ QGMNPDSKTARRYHWHSQDLKSFIEEPHTFIYGENQGTILNLTAQAASKSREGILELSKESPAKIMKEMQYLSMPAHHDV RMEDVNMKRLGAMLWATHENKPEDFEELLLLKGMGPRALQSLALVSEVIYGTPTRFEDPARFSFAHGGKDGHPFPVPVTI YDETINTLQRAINRAKIGNGDKIEAIKKLSEISRKAEQSFTPNSNFDALIQKERNESYKYGGKTVFGDAKPPKKRPPNTN NQLELF
Specific function: Unknown
COG id: COG1415
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45323; Mature: 45323
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSGTADLPLHYGQVPLWLSERMSKLGLAIVETIALEFSTSEVISKLSNPFWFQSFGAV CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH MGMDWHSSGITTSVLGALKKSVNPHSKELGIYICGGKGKHSLLTPQELLFVGEKTGLDGN HCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHEECCCCCCCCC NLANCSKLAAKVDNTAIQDGFQLYQHNFIVDNMGQWAVIQQGMNPDSKTARRYHWHSQDL CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHCCCCCCHHHHHHHCCCHHHH KSFIEEPHTFIYGENQGTILNLTAQAASKSREGILELSKESPAKIMKEMQYLSMPAHHDV HHHHCCCCEEEEECCCCEEEEEEHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC RMEDVNMKRLGAMLWATHENKPEDFEELLLLKGMGPRALQSLALVSEVIYGTPTRFEDPA EECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC RFSFAHGGKDGHPFPVPVTIYDETINTLQRAINRAKIGNGDKIEAIKKLSEISRKAEQSF CEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC TPNSNFDALIQKERNESYKYGGKTVFGDAKPPKKRPPNTNNQLELF CCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEC >Mature Secondary Structure MKRSGTADLPLHYGQVPLWLSERMSKLGLAIVETIALEFSTSEVISKLSNPFWFQSFGAV CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH MGMDWHSSGITTSVLGALKKSVNPHSKELGIYICGGKGKHSLLTPQELLFVGEKTGLDGN HCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHEECCCCCCCCC NLANCSKLAAKVDNTAIQDGFQLYQHNFIVDNMGQWAVIQQGMNPDSKTARRYHWHSQDL CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHCCCCCCHHHHHHHCCCHHHH KSFIEEPHTFIYGENQGTILNLTAQAASKSREGILELSKESPAKIMKEMQYLSMPAHHDV HHHHCCCCEEEEECCCCEEEEEEHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC RMEDVNMKRLGAMLWATHENKPEDFEELLLLKGMGPRALQSLALVSEVIYGTPTRFEDPA EECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC RFSFAHGGKDGHPFPVPVTIYDETINTLQRAINRAKIGNGDKIEAIKKLSEISRKAEQSF CEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC TPNSNFDALIQKERNESYKYGGKTVFGDAKPPKKRPPNTNNQLELF CCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA