Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300923

Identifier: 146300923

GI number: 146300923

Start: 3784235

End: 3785326

Strand: Direct

Name: 146300923

Synonym: Fjoh_3178

Alternate gene names: NA

Gene position: 3784235-3785326 (Clockwise)

Preceding gene: 146300922

Following gene: 146300924

Centisome position: 62.07

GC content: 33.52

Gene sequence:

>1092_bases
ATGGAACAGCAAAGCAAAAGAATTCCGGCACTGGATTTAATAAAAGGAATGAGTGTTATAGGAATGATAATTATACATAC
ACTGCTGACATTTGCAGATGTTAAATCACAATCGGAAACCGTTATTGGCAGTTTTATTGTTTTTCTGGGCAGAGGAACTT
CTATTTTTCTAATCTGTATGGGAATAACATTTATGACTTCTCGTCATCAAAGTCTTTCTAGTTCTCTAAAACGTGGCGGA
CTGCTTTTAGCGGCGGCTCTTTTTATGAATTTCTTAAAATTCATTTTTCCGGTAATTTTTGGTTTTGCACCAGATAATTT
TATACAACGATACGGATGGCACGGACCAATTGAACAGCAGTATTTGTATTTAATGTTATTGGGCGACATACTGCAATTAG
CAGGAATGTCTTTGCTGTTCATTGGTTTTATTCGAAAATATGTTACCAATAAATACGGAATCTTAGCCATAGGTCTATCA
ATCGCATTAGTTTCCAGAGAAGTCAGCGGCATCAATTTAAATTATCCCGTAATTAATTATGTATTAGATCTTCTTTTCAG
TAATGATTTTCCGGCATACGTTTATTTTCCTGTTTTTCCATGGATGTCTTTTATTATCATAGGAATGTTTTTTGGCAAAT
GGTATCAGGAACTTGATTATAACAGACCGCAATTGTTTAAGAGTATGCTGTATATCGGTATTTTGTTTACTTTATCAGGC
GCTCCTCTAGTTTTTATTTATGGAGATTACAATTACAATGGTTTTTACCATATGGGTCCGGGCGGTGTACTTTATTTCGC
AGGATGGACATTAATCTTTTTATGGATTATTTATAAAATATCAGTAAATATTAGAGAAAATAAGTTTGTTAGACTTTTAA
AATACTGCAGCAAGAACCTCACTTCTATGTATATGACACAATGGATATTAATTTCCTGGGGCAAAGGCATCTTTGGTTTT
AGAGAAAATGGAATAACAACGGTACTGGCACTTATAGTAATGTATATCGCCTTAACTTTTTCTGTTCAGATACTTTTGGA
TTTATTGAAAAAAAAGAGCCAGAAATCAAAGCCTGTAGAAGCTTTAAACTAA

Upstream 100 bases:

>100_bases
ACGAAAACGAAAATGTAGCTACAGCTGCAAAAACAGTTGTCGGGTAATTTAAATATGTAACTAACAATTAGGCTAAAACC
TAAAATAAAAAAACAAAACC

Downstream 100 bases:

>100_bases
AAATCAAGATATTTTTCTGTGATTAGGATATTATTAATAGATAATTTCATACTTTTGAATTTTTATTTATTCTAAATAAG
GATAGTTAATAATTCTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MEQQSKRIPALDLIKGMSVIGMIIIHTLLTFADVKSQSETVIGSFIVFLGRGTSIFLICMGITFMTSRHQSLSSSLKRGG
LLLAAALFMNFLKFIFPVIFGFAPDNFIQRYGWHGPIEQQYLYLMLLGDILQLAGMSLLFIGFIRKYVTNKYGILAIGLS
IALVSREVSGINLNYPVINYVLDLLFSNDFPAYVYFPVFPWMSFIIIGMFFGKWYQELDYNRPQLFKSMLYIGILFTLSG
APLVFIYGDYNYNGFYHMGPGGVLYFAGWTLIFLWIIYKISVNIRENKFVRLLKYCSKNLTSMYMTQWILISWGKGIFGF
RENGITTVLALIVMYIALTFSVQILLDLLKKKSQKSKPVEALN

Sequences:

>Translated_363_residues
MEQQSKRIPALDLIKGMSVIGMIIIHTLLTFADVKSQSETVIGSFIVFLGRGTSIFLICMGITFMTSRHQSLSSSLKRGG
LLLAAALFMNFLKFIFPVIFGFAPDNFIQRYGWHGPIEQQYLYLMLLGDILQLAGMSLLFIGFIRKYVTNKYGILAIGLS
IALVSREVSGINLNYPVINYVLDLLFSNDFPAYVYFPVFPWMSFIIIGMFFGKWYQELDYNRPQLFKSMLYIGILFTLSG
APLVFIYGDYNYNGFYHMGPGGVLYFAGWTLIFLWIIYKISVNIRENKFVRLLKYCSKNLTSMYMTQWILISWGKGIFGF
RENGITTVLALIVMYIALTFSVQILLDLLKKKSQKSKPVEALN
>Mature_363_residues
MEQQSKRIPALDLIKGMSVIGMIIIHTLLTFADVKSQSETVIGSFIVFLGRGTSIFLICMGITFMTSRHQSLSSSLKRGG
LLLAAALFMNFLKFIFPVIFGFAPDNFIQRYGWHGPIEQQYLYLMLLGDILQLAGMSLLFIGFIRKYVTNKYGILAIGLS
IALVSREVSGINLNYPVINYVLDLLFSNDFPAYVYFPVFPWMSFIIIGMFFGKWYQELDYNRPQLFKSMLYIGILFTLSG
APLVFIYGDYNYNGFYHMGPGGVLYFAGWTLIFLWIIYKISVNIRENKFVRLLKYCSKNLTSMYMTQWILISWGKGIFGF
RENGITTVLALIVMYIALTFSVQILLDLLKKKSQKSKPVEALN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41480; Mature: 41480

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA