Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300904

Identifier: 146300904

GI number: 146300904

Start: 3754071

End: 3756773

Strand: Direct

Name: 146300904

Synonym: Fjoh_3159

Alternate gene names: NA

Gene position: 3754071-3756773 (Clockwise)

Preceding gene: 146300903

Following gene: 146300905

Centisome position: 61.57

GC content: 35.63

Gene sequence:

>2703_bases
ATGCCGCTACTAGACCAACATATCACCATTCCTAAAAAATCAGCATCAGAGGACGATTTGGATTTCTTTTATCTAAGAAA
AAAAGGAATCGAATATATCGAGTCTTTTGGCAGTAAATTCTGGACTGATTTTAACGAGCACGATCCAGGGATTACGATGC
TGGAAATGCTTTGCTACGCCATTTCAGATCTTGGCATGAGACTCAATCTTCCGATAGAAAATATATTAGCATCTGATGAC
AGCGATAAAGGCATTCCAAAACAGTTTTTTAAAGCCTCAGAAGTATTGTCATCAAGTCCTGTTACACAAAATGATTACCG
AAAACTATTTATAGACATAAAAGGCGTTCGAAACTGCTGGCTTGCCAAACATGAAAAAACAGTGTATGTAGACTGCAAAA
AAAATCAGCTTTCTTATGACATTAAGGATTATCAAAATCTGCCGGAAAACTTAAGAAAATCTTTTGACATCAACGGCTTA
TACGATCTTTATGTAGATTTTGAAAGCTCAAAACCTTCAGAAATAGAAGCCGTTAAAGAAAAAATAAGAAAGCAGTATCA
TGCAAACAGAAACCTTTGTGAAGATCTTGTCGATATTAAAAAAGTGGTAGACTACCCTATTAAAATATGTGCCGATATCG
AAGTTGATACAGAAGCCGATGAAGAACTGGTTCATGCCAATGTGATTAATGCTCTGGAAAGCTACTTATCGACAACCGTC
AATTTTTATTCTCTAAAACAAATGATTGACAAAGGATATTCAACTTTGGAAATTTTCGACGGTCCAAGTTTAGAAAACGG
TTTTATTGATACAAAAGAACTCCTTACGGCCGATTTGAGAAACGAAGTGCGTCTTTCAGATATTATGAGAATAATAATGT
CTGTACCTGATGTAATTTTAATTAAAGATATTTCTTTGGGAAATTGCGGCGGTGATGATTTGGAAAACAAATGGCTTATC
TGTCTTGCCCCTTACCAAAAACCCGTTATTTGTGCTAAAAGTGTATTCAATTACAACAAAGGATTACTGCCTTTGAATAT
CAATCAGGCTCAGGTAAAAATTTATTTAGATGCTATAAAAGCCGAAAAAGACAAAGCTACAACCAACGCCAGTCAGGATA
AAGAATTAGATGTGCCAAATGGCGAATATCTTAACACCGATTTTTATACCACTATACAAAATGATTTTCCTGAAACTTAT
GGAATTGGCGAAGTTGGGCTTCCTTCCAGAGCATCTGTTGAACGCAAATCGAAAGCAAAACAATTAAAAGGATATCTTTT
ATTTTTTGATCAGATATTAGGAAGTTATTTTAAACAACTGGGGCAGATAAGCGAATTACTTTCAGTAAGCGGCAATTTAA
CCCGAACCCTTTTTACTCAGGTTGTCAAAGACATTGAAGGAGCAGATGAAATTGTAAACGGATATGAAAATTACACCGAT
GACAGCATTACAGAACTGCTTTTTGACCAGCAGGACAATAATATAGAACGAAGAAATAAAATTTTAGACCATCTTTTGTC
CCGTTTTGCCGAGAATTTCTCGGAGTACGTATTTGTCAATAAAACCATTTACGGCAATACTACAGATCAGGTAGTACTGC
GTGACAAAGAAAACTTTCTAAAAGATTATAAAGTAGTAAGTAAAGAGCGCGGCAATGCCTTTGATTATTACAAACAGCCC
ACTGCTAATTTATGGAATACCAATAATGTTTCGGGAGCAGAAAAAAGGATTTCGAGATTGATTGGTATTCGAAATTACAG
CCGCAGGAATCTTTCTAATTCGTTTGTCGAAATGTACAATTTTATTGATTCAGATAATCAATCAGTTTATAGATGGCGCA
TTCTGGATACTCATAATGAAATTGTGCTTTCTTCAACAGCGGAATACTTTGATACTTCTGCTGCAAATAAAGAGCTTTAT
TTTGCTGTATTACAGATTATTCAGACTCGCGAATACAAAATAAAAGAAGCTTTTAAAAACGGCACAGTACAAGATTTATC
TATTATCGATAATATTTTGATTCAGCAGTCAGATGCCGGAAAATATTCTTATGATATTATAAATCCGGCAATTAATGACA
AGAAAAATCCTGACCGCATTATTGCCCGCAGATATGAATACTATACTAATCTGGCGGATTTAGAAAAATCAATTCTGGAC
TTAATTCAGTTCATGAAAGAAGATTTTACCGAAGAAGGAATGTTTTTGGTAGAACACATGATGCTTCGCCCGGATGTAAA
CCAGACAACCGTAAATCCAGATACCTTCATGCCAGTCTGCGCCGATGAGTGCGGTGATTGCGAACCAATAGATCCCTACT
CCTATCGCGTGAGCGTAGTACTTCCGGGATATACATTGCGATTTGCCAACACCGATTTTAGAAATTATATAGAAAAAATA
ATTAAAGAAGAATTACCAGCTCACGTTCTGGCAAAAATATGCTGGATTGGCTACAGGGAAAAAGATGTAAAAGACCCCGC
AGAAAACCAGCTTATTCAATTTGAAAAAACCTATAAAGACTATTTATCCGCCAAAACAAATTTGAATCAGGAACAGCCGG
AACCGCAATTAATCAGCTTTATAAAATCACTAACCAGTCTGGATAATGTTTACCCAACAGGACGACTATTTGACTGCAGT
GATGAAAACGAGCGATTGTCAGATAAAATTATACTAGGAAAAACGAATTTAGGATCACTATAA

Upstream 100 bases:

>100_bases
CACCATCAAGTCCAAAAAACATTTTAGTTTCTGTTAAAAACCATATTATCAGTACCAAAATAGACACTTGCAAAAAAATA
ACTCAAGAAGAACCTGAAAA

Downstream 100 bases:

>100_bases
AAACTATTGCCATGTCAGCAAAACTTTCAACAATAACAACACAATACCGAAGATTCACAAAGAATCAGGTACTTACAGAA
GGAAACCTTAATGAGGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 900; Mature: 899

Protein sequence:

>900_residues
MPLLDQHITIPKKSASEDDLDFFYLRKKGIEYIESFGSKFWTDFNEHDPGITMLEMLCYAISDLGMRLNLPIENILASDD
SDKGIPKQFFKASEVLSSSPVTQNDYRKLFIDIKGVRNCWLAKHEKTVYVDCKKNQLSYDIKDYQNLPENLRKSFDINGL
YDLYVDFESSKPSEIEAVKEKIRKQYHANRNLCEDLVDIKKVVDYPIKICADIEVDTEADEELVHANVINALESYLSTTV
NFYSLKQMIDKGYSTLEIFDGPSLENGFIDTKELLTADLRNEVRLSDIMRIIMSVPDVILIKDISLGNCGGDDLENKWLI
CLAPYQKPVICAKSVFNYNKGLLPLNINQAQVKIYLDAIKAEKDKATTNASQDKELDVPNGEYLNTDFYTTIQNDFPETY
GIGEVGLPSRASVERKSKAKQLKGYLLFFDQILGSYFKQLGQISELLSVSGNLTRTLFTQVVKDIEGADEIVNGYENYTD
DSITELLFDQQDNNIERRNKILDHLLSRFAENFSEYVFVNKTIYGNTTDQVVLRDKENFLKDYKVVSKERGNAFDYYKQP
TANLWNTNNVSGAEKRISRLIGIRNYSRRNLSNSFVEMYNFIDSDNQSVYRWRILDTHNEIVLSSTAEYFDTSAANKELY
FAVLQIIQTREYKIKEAFKNGTVQDLSIIDNILIQQSDAGKYSYDIINPAINDKKNPDRIIARRYEYYTNLADLEKSILD
LIQFMKEDFTEEGMFLVEHMMLRPDVNQTTVNPDTFMPVCADECGDCEPIDPYSYRVSVVLPGYTLRFANTDFRNYIEKI
IKEELPAHVLAKICWIGYREKDVKDPAENQLIQFEKTYKDYLSAKTNLNQEQPEPQLISFIKSLTSLDNVYPTGRLFDCS
DENERLSDKIILGKTNLGSL

Sequences:

>Translated_900_residues
MPLLDQHITIPKKSASEDDLDFFYLRKKGIEYIESFGSKFWTDFNEHDPGITMLEMLCYAISDLGMRLNLPIENILASDD
SDKGIPKQFFKASEVLSSSPVTQNDYRKLFIDIKGVRNCWLAKHEKTVYVDCKKNQLSYDIKDYQNLPENLRKSFDINGL
YDLYVDFESSKPSEIEAVKEKIRKQYHANRNLCEDLVDIKKVVDYPIKICADIEVDTEADEELVHANVINALESYLSTTV
NFYSLKQMIDKGYSTLEIFDGPSLENGFIDTKELLTADLRNEVRLSDIMRIIMSVPDVILIKDISLGNCGGDDLENKWLI
CLAPYQKPVICAKSVFNYNKGLLPLNINQAQVKIYLDAIKAEKDKATTNASQDKELDVPNGEYLNTDFYTTIQNDFPETY
GIGEVGLPSRASVERKSKAKQLKGYLLFFDQILGSYFKQLGQISELLSVSGNLTRTLFTQVVKDIEGADEIVNGYENYTD
DSITELLFDQQDNNIERRNKILDHLLSRFAENFSEYVFVNKTIYGNTTDQVVLRDKENFLKDYKVVSKERGNAFDYYKQP
TANLWNTNNVSGAEKRISRLIGIRNYSRRNLSNSFVEMYNFIDSDNQSVYRWRILDTHNEIVLSSTAEYFDTSAANKELY
FAVLQIIQTREYKIKEAFKNGTVQDLSIIDNILIQQSDAGKYSYDIINPAINDKKNPDRIIARRYEYYTNLADLEKSILD
LIQFMKEDFTEEGMFLVEHMMLRPDVNQTTVNPDTFMPVCADECGDCEPIDPYSYRVSVVLPGYTLRFANTDFRNYIEKI
IKEELPAHVLAKICWIGYREKDVKDPAENQLIQFEKTYKDYLSAKTNLNQEQPEPQLISFIKSLTSLDNVYPTGRLFDCS
DENERLSDKIILGKTNLGSL
>Mature_899_residues
PLLDQHITIPKKSASEDDLDFFYLRKKGIEYIESFGSKFWTDFNEHDPGITMLEMLCYAISDLGMRLNLPIENILASDDS
DKGIPKQFFKASEVLSSSPVTQNDYRKLFIDIKGVRNCWLAKHEKTVYVDCKKNQLSYDIKDYQNLPENLRKSFDINGLY
DLYVDFESSKPSEIEAVKEKIRKQYHANRNLCEDLVDIKKVVDYPIKICADIEVDTEADEELVHANVINALESYLSTTVN
FYSLKQMIDKGYSTLEIFDGPSLENGFIDTKELLTADLRNEVRLSDIMRIIMSVPDVILIKDISLGNCGGDDLENKWLIC
LAPYQKPVICAKSVFNYNKGLLPLNINQAQVKIYLDAIKAEKDKATTNASQDKELDVPNGEYLNTDFYTTIQNDFPETYG
IGEVGLPSRASVERKSKAKQLKGYLLFFDQILGSYFKQLGQISELLSVSGNLTRTLFTQVVKDIEGADEIVNGYENYTDD
SITELLFDQQDNNIERRNKILDHLLSRFAENFSEYVFVNKTIYGNTTDQVVLRDKENFLKDYKVVSKERGNAFDYYKQPT
ANLWNTNNVSGAEKRISRLIGIRNYSRRNLSNSFVEMYNFIDSDNQSVYRWRILDTHNEIVLSSTAEYFDTSAANKELYF
AVLQIIQTREYKIKEAFKNGTVQDLSIIDNILIQQSDAGKYSYDIINPAINDKKNPDRIIARRYEYYTNLADLEKSILDL
IQFMKEDFTEEGMFLVEHMMLRPDVNQTTVNPDTFMPVCADECGDCEPIDPYSYRVSVVLPGYTLRFANTDFRNYIEKII
KEELPAHVLAKICWIGYREKDVKDPAENQLIQFEKTYKDYLSAKTNLNQEQPEPQLISFIKSLTSLDNVYPTGRLFDCSD
ENERLSDKIILGKTNLGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103656; Mature: 103525

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLDQHITIPKKSASEDDLDFFYLRKKGIEYIESFGSKFWTDFNEHDPGITMLEMLCYA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ISDLGMRLNLPIENILASDDSDKGIPKQFFKASEVLSSSPVTQNDYRKLFIDIKGVRNCW
HHHCCCEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHH
LAKHEKTVYVDCKKNQLSYDIKDYQNLPENLRKSFDINGLYDLYVDFESSKPSEIEAVKE
HCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHH
KIRKQYHANRNLCEDLVDIKKVVDYPIKICADIEVDTEADEELVHANVINALESYLSTTV
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
NFYSLKQMIDKGYSTLEIFDGPSLENGFIDTKELLTADLRNEVRLSDIMRIIMSVPDVIL
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IKDISLGNCGGDDLENKWLICLAPYQKPVICAKSVFNYNKGLLPLNINQAQVKIYLDAIK
EEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCEEEEEEEEHHH
AEKDKATTNASQDKELDVPNGEYLNTDFYTTIQNDFPETYGIGEVGLPSRASVERKSKAK
CCHHHCCCCCCCCCCCCCCCCCEECCCCEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
QLKGYLLFFDQILGSYFKQLGQISELLSVSGNLTRTLFTQVVKDIEGADEIVNGYENYTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCC
DSITELLFDQQDNNIERRNKILDHLLSRFAENFSEYVFVNKTIYGNTTDQVVLRDKENFL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHCEEEEEEEEECCCCCEEEEECHHHHH
KDYKVVSKERGNAFDYYKQPTANLWNTNNVSGAEKRISRLIGIRNYSRRNLSNSFVEMYN
HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FIDSDNQSVYRWRILDTHNEIVLSSTAEYFDTSAANKELYFAVLQIIQTREYKIKEAFKN
HHCCCCCCEEEEEEECCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GTVQDLSIIDNILIQQSDAGKYSYDIINPAINDKKNPDRIIARRYEYYTNLADLEKSILD
CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIQFMKEDFTEEGMFLVEHMMLRPDVNQTTVNPDTFMPVCADECGDCEPIDPYSYRVSVV
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEE
LPGYTLRFANTDFRNYIEKIIKEELPAHVLAKICWIGYREKDVKDPAENQLIQFEKTYKD
ECCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
YLSAKTNLNQEQPEPQLISFIKSLTSLDNVYPTGRLFDCSDENERLSDKIILGKTNLGSL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
PLLDQHITIPKKSASEDDLDFFYLRKKGIEYIESFGSKFWTDFNEHDPGITMLEMLCYA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ISDLGMRLNLPIENILASDDSDKGIPKQFFKASEVLSSSPVTQNDYRKLFIDIKGVRNCW
HHHCCCEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHH
LAKHEKTVYVDCKKNQLSYDIKDYQNLPENLRKSFDINGLYDLYVDFESSKPSEIEAVKE
HCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHH
KIRKQYHANRNLCEDLVDIKKVVDYPIKICADIEVDTEADEELVHANVINALESYLSTTV
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
NFYSLKQMIDKGYSTLEIFDGPSLENGFIDTKELLTADLRNEVRLSDIMRIIMSVPDVIL
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IKDISLGNCGGDDLENKWLICLAPYQKPVICAKSVFNYNKGLLPLNINQAQVKIYLDAIK
EEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCEEEEEEEEHHH
AEKDKATTNASQDKELDVPNGEYLNTDFYTTIQNDFPETYGIGEVGLPSRASVERKSKAK
CCHHHCCCCCCCCCCCCCCCCCEECCCCEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
QLKGYLLFFDQILGSYFKQLGQISELLSVSGNLTRTLFTQVVKDIEGADEIVNGYENYTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCC
DSITELLFDQQDNNIERRNKILDHLLSRFAENFSEYVFVNKTIYGNTTDQVVLRDKENFL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHCEEEEEEEEECCCCCEEEEECHHHHH
KDYKVVSKERGNAFDYYKQPTANLWNTNNVSGAEKRISRLIGIRNYSRRNLSNSFVEMYN
HHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FIDSDNQSVYRWRILDTHNEIVLSSTAEYFDTSAANKELYFAVLQIIQTREYKIKEAFKN
HHCCCCCCEEEEEEECCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GTVQDLSIIDNILIQQSDAGKYSYDIINPAINDKKNPDRIIARRYEYYTNLADLEKSILD
CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIQFMKEDFTEEGMFLVEHMMLRPDVNQTTVNPDTFMPVCADECGDCEPIDPYSYRVSVV
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEE
LPGYTLRFANTDFRNYIEKIIKEELPAHVLAKICWIGYREKDVKDPAENQLIQFEKTYKD
ECCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
YLSAKTNLNQEQPEPQLISFIKSLTSLDNVYPTGRLFDCSDENERLSDKIILGKTNLGSL
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA