| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300897
Identifier: 146300897
GI number: 146300897
Start: 3746732
End: 3747178
Strand: Direct
Name: 146300897
Synonym: Fjoh_3152
Alternate gene names: NA
Gene position: 3746732-3747178 (Clockwise)
Preceding gene: 146300896
Following gene: 146300898
Centisome position: 61.45
GC content: 36.02
Gene sequence:
>447_bases ATGGCTAACTATTATCCACCCGTAGGTTTTCATTTTCTGGTTGAATTTGATCAGCTGGGCACGAAAGAAAAAGACCATCA ATTTCAATCCGTATCAGGACTCTCCGTAGATCTTGAAACGGAAGAAATTGTCGAGGGTGGAGAAAACAGATTCAAACACA AACTTCCTGTAAAAACCAAATATCCCAATTTGGTTTTAAAAAGAGGGATACTAATTGATTCTGACGTAATTGAATGGTGC CGAAAAGCATTAGAAAATTTCGAGTTTAAGCCCGTCGATTTAACTGTAAAACTATTAAATCAGGACCATGAACCTTTAAT GCACTGGAAAGTGGTACATGCTTATCCTGTAAAATGGGCAGTTGAAGATTTTAGTGCTCTGGAAAGCAAAATTGTTGTTG AAAGCTTTGAGCTTGCTTATAATTATTTCACCCTTCATAAAAAATAA
Upstream 100 bases:
>100_bases CAAAAGTGCAGTCAACTGATTTAAAAGCCGATGGAAACGAAGTAGCCATCGAGTCAATAGAATTGGTCCACGAAGGTTTA TCTATTCAAAATGATTAGTC
Downstream 100 bases:
>100_bases TTTTATCATGCCAATTGAAATCAAAGAGCTTCACATTAAAATAAACGTGAACGAAAGCTCAAATTCGGGTGTAAAACCAG CTGCTTCATCTTCATTAAAC
Product: phage tail protein
Products: NA
Alternate protein names: Phage Tail Region Protein; Phospholipid/Glycerol Acyltransferase; Conserved Phage Tail Region Protein; Phage Tail Tube Protein Gp
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MANYYPPVGFHFLVEFDQLGTKEKDHQFQSVSGLSVDLETEEIVEGGENRFKHKLPVKTKYPNLVLKRGILIDSDVIEWC RKALENFEFKPVDLTVKLLNQDHEPLMHWKVVHAYPVKWAVEDFSALESKIVVESFELAYNYFTLHKK
Sequences:
>Translated_148_residues MANYYPPVGFHFLVEFDQLGTKEKDHQFQSVSGLSVDLETEEIVEGGENRFKHKLPVKTKYPNLVLKRGILIDSDVIEWC RKALENFEFKPVDLTVKLLNQDHEPLMHWKVVHAYPVKWAVEDFSALESKIVVESFELAYNYFTLHKK >Mature_147_residues ANYYPPVGFHFLVEFDQLGTKEKDHQFQSVSGLSVDLETEEIVEGGENRFKHKLPVKTKYPNLVLKRGILIDSDVIEWCR KALENFEFKPVDLTVKLLNQDHEPLMHWKVVHAYPVKWAVEDFSALESKIVVESFELAYNYFTLHKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17325; Mature: 17194
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYYPPVGFHFLVEFDQLGTKEKDHQFQSVSGLSVDLETEEIVEGGENRFKHKLPVKTK CCCCCCCCCEEEEEEHHHCCCCCCCCHHHHCCCCEEECCHHHHHCCCCHHCEECCCCCCC YPNLVLKRGILIDSDVIEWCRKALENFEFKPVDLTVKLLNQDHEPLMHWKVVHAYPVKWA CCCHHHHCCEEECHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCHHEEEEEEECCCCHH VEDFSALESKIVVESFELAYNYFTLHKK HHHHHHHHHHHHHHHHHHHEEEEEEECC >Mature Secondary Structure ANYYPPVGFHFLVEFDQLGTKEKDHQFQSVSGLSVDLETEEIVEGGENRFKHKLPVKTK CCCCCCCCEEEEEEHHHCCCCCCCCHHHHCCCCEEECCHHHHHCCCCHHCEECCCCCCC YPNLVLKRGILIDSDVIEWCRKALENFEFKPVDLTVKLLNQDHEPLMHWKVVHAYPVKWA CCCHHHHCCEEECHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCHHEEEEEEECCCCHH VEDFSALESKIVVESFELAYNYFTLHKK HHHHHHHHHHHHHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA