| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300873
Identifier: 146300873
GI number: 146300873
Start: 3716287
End: 3718458
Strand: Reverse
Name: 146300873
Synonym: Fjoh_3128
Alternate gene names: NA
Gene position: 3718458-3716287 (Counterclockwise)
Preceding gene: 146300874
Following gene: 146300872
Centisome position: 60.99
GC content: 36.05
Gene sequence:
>2172_bases ATGAAAAGAGAGAATTTTAAAATTAAAAAGAGCAATTCCTTAAAATTGCCCGTAATGTTTTTTTTGCTGTTATTTTTTTA TGGCAGTAAAGTGTACTCCCAGAATAATGAAAAAACAAAAAGTGCTGCAGCAGTTATAGAAAGACTTGTCGGCCGTCGTG TCAATGAATTTGAACTGCATATTGTTGAAAACAACAATGAAAACAAAGATTGGTTTGAAATTGAAACAACAGATAATCTT GTAAAAATTAAAGCTTCAAATAATACAACAATCTGCTATGCCGCATACAACTTTCTGCGAGATATTGGAGCTGTTTTAGT GAGCTGGGAAGGAAACAGAATCAATCTTCCAAAGTCATGGCCTAAATATTCTAAAAAAGGAGACACTCCGTTTCCGTATA GAGAATATCTAAATGCCTGTACTTTTGGATATACCACGCCTTGGTGGGATTGGAAACGCTGGGAGCAAGAGATCGATTGG ATGGCTTTGCATGGAATTAATCTACCAACCGCAATGGAAGGACAGGAAGCAGTATGGCAGGAATTATGGAAAGAATACGG ATTAACCAGCACGCAGTTAGAAGCGCATTTTGCAGGACCGGCATTTTTGCCATGGCAGCGCATGGGGAATATAAACAGTC TCGAAGGACCATTGCCGCAAGAATGGTTCAGTAAAAAAGAAGAACTGCAAAAAAAGATATTAGAAAGAATGCGCACTTTA GACATGCATCCTGTTGTGCCGGCTTTTAGCGGTTATGTTCCAAAGGCTTTCGCCGAAAAACATCCCGAAGCCAAAATAAC CGAACTCAATTCTTGGTCTGGCGGCGGTTTCGAAAGTACTTTTCTACTTGATTCAAAAGATCCTTTGTTTAAAAAAATTG GAAAACGTTTTATAGAAATCTATACCAAAATGTATGGAAAGTCTAATTTTTATTTAGCCGATTCTTTTAACGAAATTGAA CCGCCGGTTACTGAACATAATAAATATGAAGAACTTGCCAATTACGGGAGTGCCATTTATGAAACTATTGAAGAAGCTGC TCCGGGAGCAGTTTGGGTGATGCAGGGATGGCTTTTTGGAGATAACAAAAATTTCTGGACAAAAGAAGCTACAAGCGCAT TTTTAAGCAAAGTTCCTAATGACCGATTAATGGTTCAGGATTATGCCAATGATAGATATAAGGTATGGGAAAATCAGGAA GCATTTTACGGCAAACAATGGACTTACGGATATGTACATAATTATGGAGGATCGAATCCGGTATATGGAGATTTAAATTT CTACAAAAATGAATTGGTAAGTCTGCTCAAAAATCCGCATAGAGGAAATGTCGTTGGCTACGGCGCGATGCCGGAAGGAT TAAACAACAATGCTATTGTTTATGAATTTATTTATGATCTTCCGTGGAGTAAGGGAGAGCAGTCTGTTAAAGACTGGCTT ACAAATTATTTAAACGCAAGGTATGAACAAAAGACATCTGATTCTGTTTTTAAGGCTTGGGAATTATTATTAGAATCAGT TTACAGTACAAAATACTGGGAAACCAGATGGTGGAATGACAGGGCTGGAGCTTATTTACTGTTTAAAAGACCAACGGCGA CAATTACAGAATTTAAAGGAAACCCAGGCGATAAGGATAAATTAAAAGAAGCGTTGGATATTTTAAAAGCAGAAGCTAAA AAATACGATAAAAAGAACTTTATACAATATGATTTAATTGATGCTTCAAGGCATTATTATTCACTCTCTATAGATGAAGA CTTAGTCGAATGTGTAAAAGCCTATCAGCAAAAAGACATTACAAAAGGCGATCAGTTATTTAAAAAGATAGAAAAACAAG TTTTAGAAATAGATAAATCAATGTCTGGACAGCCGCTAAACAGCTTGAATTATTGGGTTAAGTCGGCATCAGAATATGGA AGTACGCCTGAAGTTTCTAAATTATATGTAAAAAATGCTAAAACATTAATTACACTTTGGGGCGGAGAAGGTCATTTGAA TGATTATGCTTCAAGATCATGGCAGGGAATGTACAAAGGCTTTTACTGGCCAAGATGGAAAATGTTTTTGACAGCTTTCA AAAAGACTGCAGTCAATAATACACCATTTGATGAAACAAAAGAAAGAGAAGAAATTAAAAATTGGGAAATAAAATGGACA AAAAACAATTAA
Upstream 100 bases:
>100_bases TTATTGGTAATAGATTTTTGTTTTTATTGGGAGATTACCTGTTTAATCTCCCTTTGTTTTATGGTAAGATGATTTGAGAT AATAATGATATTCAATTTAT
Downstream 100 bases:
>100_bases ATGAAATCTCTCAATTGTAAATAATACGTAAATAAGCAGAAATAACAATCAACTGAAAACTAGAATGAAAAAACAACAAA CCATAATCTTAAAATATATG
Product: alpha-N-acetylglucosaminidase
Products: NA
Alternate protein names: Alpha-N-Acetylglucosaminidase Family Protein; N-Acetylglucosaminidase; Glycoside Hydrolase Family; Truncated N-Acetylglucosaminidase; LOW QUALITY PROTEIN Alpha-N-Acetylglucosaminidase
Number of amino acids: Translated: 723; Mature: 723
Protein sequence:
>723_residues MKRENFKIKKSNSLKLPVMFFLLLFFYGSKVYSQNNEKTKSAAAVIERLVGRRVNEFELHIVENNNENKDWFEIETTDNL VKIKASNNTTICYAAYNFLRDIGAVLVSWEGNRINLPKSWPKYSKKGDTPFPYREYLNACTFGYTTPWWDWKRWEQEIDW MALHGINLPTAMEGQEAVWQELWKEYGLTSTQLEAHFAGPAFLPWQRMGNINSLEGPLPQEWFSKKEELQKKILERMRTL DMHPVVPAFSGYVPKAFAEKHPEAKITELNSWSGGGFESTFLLDSKDPLFKKIGKRFIEIYTKMYGKSNFYLADSFNEIE PPVTEHNKYEELANYGSAIYETIEEAAPGAVWVMQGWLFGDNKNFWTKEATSAFLSKVPNDRLMVQDYANDRYKVWENQE AFYGKQWTYGYVHNYGGSNPVYGDLNFYKNELVSLLKNPHRGNVVGYGAMPEGLNNNAIVYEFIYDLPWSKGEQSVKDWL TNYLNARYEQKTSDSVFKAWELLLESVYSTKYWETRWWNDRAGAYLLFKRPTATITEFKGNPGDKDKLKEALDILKAEAK KYDKKNFIQYDLIDASRHYYSLSIDEDLVECVKAYQQKDITKGDQLFKKIEKQVLEIDKSMSGQPLNSLNYWVKSASEYG STPEVSKLYVKNAKTLITLWGGEGHLNDYASRSWQGMYKGFYWPRWKMFLTAFKKTAVNNTPFDETKEREEIKNWEIKWT KNN
Sequences:
>Translated_723_residues MKRENFKIKKSNSLKLPVMFFLLLFFYGSKVYSQNNEKTKSAAAVIERLVGRRVNEFELHIVENNNENKDWFEIETTDNL VKIKASNNTTICYAAYNFLRDIGAVLVSWEGNRINLPKSWPKYSKKGDTPFPYREYLNACTFGYTTPWWDWKRWEQEIDW MALHGINLPTAMEGQEAVWQELWKEYGLTSTQLEAHFAGPAFLPWQRMGNINSLEGPLPQEWFSKKEELQKKILERMRTL DMHPVVPAFSGYVPKAFAEKHPEAKITELNSWSGGGFESTFLLDSKDPLFKKIGKRFIEIYTKMYGKSNFYLADSFNEIE PPVTEHNKYEELANYGSAIYETIEEAAPGAVWVMQGWLFGDNKNFWTKEATSAFLSKVPNDRLMVQDYANDRYKVWENQE AFYGKQWTYGYVHNYGGSNPVYGDLNFYKNELVSLLKNPHRGNVVGYGAMPEGLNNNAIVYEFIYDLPWSKGEQSVKDWL TNYLNARYEQKTSDSVFKAWELLLESVYSTKYWETRWWNDRAGAYLLFKRPTATITEFKGNPGDKDKLKEALDILKAEAK KYDKKNFIQYDLIDASRHYYSLSIDEDLVECVKAYQQKDITKGDQLFKKIEKQVLEIDKSMSGQPLNSLNYWVKSASEYG STPEVSKLYVKNAKTLITLWGGEGHLNDYASRSWQGMYKGFYWPRWKMFLTAFKKTAVNNTPFDETKEREEIKNWEIKWT KNN >Mature_723_residues MKRENFKIKKSNSLKLPVMFFLLLFFYGSKVYSQNNEKTKSAAAVIERLVGRRVNEFELHIVENNNENKDWFEIETTDNL VKIKASNNTTICYAAYNFLRDIGAVLVSWEGNRINLPKSWPKYSKKGDTPFPYREYLNACTFGYTTPWWDWKRWEQEIDW MALHGINLPTAMEGQEAVWQELWKEYGLTSTQLEAHFAGPAFLPWQRMGNINSLEGPLPQEWFSKKEELQKKILERMRTL DMHPVVPAFSGYVPKAFAEKHPEAKITELNSWSGGGFESTFLLDSKDPLFKKIGKRFIEIYTKMYGKSNFYLADSFNEIE PPVTEHNKYEELANYGSAIYETIEEAAPGAVWVMQGWLFGDNKNFWTKEATSAFLSKVPNDRLMVQDYANDRYKVWENQE AFYGKQWTYGYVHNYGGSNPVYGDLNFYKNELVSLLKNPHRGNVVGYGAMPEGLNNNAIVYEFIYDLPWSKGEQSVKDWL TNYLNARYEQKTSDSVFKAWELLLESVYSTKYWETRWWNDRAGAYLLFKRPTATITEFKGNPGDKDKLKEALDILKAEAK KYDKKNFIQYDLIDASRHYYSLSIDEDLVECVKAYQQKDITKGDQLFKKIEKQVLEIDKSMSGQPLNSLNYWVKSASEYG STPEVSKLYVKNAKTLITLWGGEGHLNDYASRSWQGMYKGFYWPRWKMFLTAFKKTAVNNTPFDETKEREEIKNWEIKWT KNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66346698, Length=636, Percent_Identity=33.1761006289308, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI32564213, Length=584, Percent_Identity=27.9109589041096, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI21356587, Length=689, Percent_Identity=28.8824383164006, Blast_Score=342, Evalue=4e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84600; Mature: 84600
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRENFKIKKSNSLKLPVMFFLLLFFYGSKVYSQNNEKTKSAAAVIERLVGRRVNEFELH CCCCCCEEECCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEE IVENNNENKDWFEIETTDNLVKIKASNNTTICYAAYNFLRDIGAVLVSWEGNRINLPKSW EEECCCCCCCEEEEECCCCEEEEEECCCCEEEHHHHHHHHHHHHEEEEECCCEECCCCCC PKYSKKGDTPFPYREYLNACTFGYTTPWWDWKRWEQEIDWMALHGINLPTAMEGQEAVWQ CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHH ELWKEYGLTSTQLEAHFAGPAFLPWQRMGNINSLEGPLPQEWFSKKEELQKKILERMRTL HHHHHHCCCCCEEHEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DMHPVVPAFSGYVPKAFAEKHPEAKITELNSWSGGGFESTFLLDSKDPLFKKIGKRFIEI CCCCCCHHHCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH YTKMYGKSNFYLADSFNEIEPPVTEHNKYEELANYGSAIYETIEEAAPGAVWVMQGWLFG HHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE DNKNFWTKEATSAFLSKVPNDRLMVQDYANDRYKVWENQEAFYGKQWTYGYVHNYGGSNP CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHCCCCCEEEEEECCCCCCC VYGDLNFYKNELVSLLKNPHRGNVVGYGAMPEGLNNNAIVYEFIYDLPWSKGEQSVKDWL CEECHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH TNYLNARYEQKTSDSVFKAWELLLESVYSTKYWETRWWNDRAGAYLLFKRPTATITEFKG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCC NPGDKDKLKEALDILKAEAKKYDKKNFIQYDLIDASRHYYSLSIDEDLVECVKAYQQKDI CCCCHHHHHHHHHHHHHHHHHCCHHCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHCCC TKGDQLFKKIEKQVLEIDKSMSGQPLNSLNYWVKSASEYGSTPEVSKLYVKNAKTLITLW CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEE GGEGHLNDYASRSWQGMYKGFYWPRWKMFLTAFKKTAVNNTPFDETKEREEIKNWEIKWT CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEE KNN CCC >Mature Secondary Structure MKRENFKIKKSNSLKLPVMFFLLLFFYGSKVYSQNNEKTKSAAAVIERLVGRRVNEFELH CCCCCCEEECCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEE IVENNNENKDWFEIETTDNLVKIKASNNTTICYAAYNFLRDIGAVLVSWEGNRINLPKSW EEECCCCCCCEEEEECCCCEEEEEECCCCEEEHHHHHHHHHHHHEEEEECCCEECCCCCC PKYSKKGDTPFPYREYLNACTFGYTTPWWDWKRWEQEIDWMALHGINLPTAMEGQEAVWQ CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHH ELWKEYGLTSTQLEAHFAGPAFLPWQRMGNINSLEGPLPQEWFSKKEELQKKILERMRTL HHHHHHCCCCCEEHEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DMHPVVPAFSGYVPKAFAEKHPEAKITELNSWSGGGFESTFLLDSKDPLFKKIGKRFIEI CCCCCCHHHCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH YTKMYGKSNFYLADSFNEIEPPVTEHNKYEELANYGSAIYETIEEAAPGAVWVMQGWLFG HHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE DNKNFWTKEATSAFLSKVPNDRLMVQDYANDRYKVWENQEAFYGKQWTYGYVHNYGGSNP CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHCCCCCEEEEEECCCCCCC VYGDLNFYKNELVSLLKNPHRGNVVGYGAMPEGLNNNAIVYEFIYDLPWSKGEQSVKDWL CEECHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHH TNYLNARYEQKTSDSVFKAWELLLESVYSTKYWETRWWNDRAGAYLLFKRPTATITEFKG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCC NPGDKDKLKEALDILKAEAKKYDKKNFIQYDLIDASRHYYSLSIDEDLVECVKAYQQKDI CCCCHHHHHHHHHHHHHHHHHCCHHCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHCCC TKGDQLFKKIEKQVLEIDKSMSGQPLNSLNYWVKSASEYGSTPEVSKLYVKNAKTLITLW CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEE GGEGHLNDYASRSWQGMYKGFYWPRWKMFLTAFKKTAVNNTPFDETKEREEIKNWEIKWT CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEE KNN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA