Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300867
Identifier: 146300867
GI number: 146300867
Start: 3704707
End: 3705558
Strand: Reverse
Name: 146300867
Synonym: Fjoh_3122
Alternate gene names: NA
Gene position: 3705558-3704707 (Counterclockwise)
Preceding gene: 146300868
Following gene: 146300866
Centisome position: 60.78
GC content: 36.15
Gene sequence:
>852_bases ATGAAACTATCTATCGTAACCTCTTTACTTTTTTGCTGTGTTTGTTTTGGACAGAATAATACAGACAACAGTTTGTATAT GAAGTCAGACAAAATTACATATCTAACAGATATCGGCTCAGAATCAGGAGATTTATATAAAACAATCGGGCATCACGGTC CGGCAGTTGAAAACGAGTGGATGGCATTGCGAATTTATTTCAGCGATAAAGTAGCAATTGACGTTTATTCTAAAGCCAAA CCAGGTTTAGAATTAAGAAAAGCAAATTGGTACCCAACACCGGAACAGCAAAAAGAAGGCTGGGGAGCTGATTATTATAA AGTAGCTTCAACAGTTGGTTTAGGAGGAGTAAAACTTTGGGATGGAGAAAAAGTTGTGCCTTTAAATCCGGTAACCAATC GTTTGGCAAGAGTAGGGAAAACAGATACGACTTCCTGGATGGAAATGATTTCAAGAGGCGTGCCTTACAAAGGAAAAAAA GTAGACATTTTAGTTCGCGTAACAGTATTTTCAGGTAAAAGAGAAGCAAAAGTTGAAGCTGTTTCTTTAACTGGAGAGAA AGTACAATTTGCCACAGGAGTAAATTACTTTAAAGATTGTGCAACGAAAAAAGGTGCAGATTATATTGCAGTTTGGGGAA AACATCCGGAAGATGTGGCAGCCGAAATTGTTGAAGTTGGAGGAGCAATTAAATACAATCCGAAAGATTTTGAAAAAACT ACAGACGACGGAACGCAGTATTTATTGATTTCTAAACCAGCAAAGAACTTAGAAACAACCATTTTATCTTCATGTGCAAG AGAAACAGAATTAAACACTTTAGATAAATTGGAAGCATACATTAAAAAATAA
Upstream 100 bases:
>100_bases AATTGATAATTTCCAAACAATAGATAGAATTCTTAGTAGATTGTTGAAAGTTGTTTTTAAATTTACAGGAATTACACTTA AACTTATAATATTTTAAATT
Downstream 100 bases:
>100_bases TAGAATTATCCTTTAAGCAAGAACGCGGATTAAACGGATTTACTTCGTAAAGACGCGGATAAAAACGGATAATCTATTTA TATTTTTAAAAGATTAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKLSIVTSLLFCCVCFGQNNTDNSLYMKSDKITYLTDIGSESGDLYKTIGHHGPAVENEWMALRIYFSDKVAIDVYSKAK PGLELRKANWYPTPEQQKEGWGADYYKVASTVGLGGVKLWDGEKVVPLNPVTNRLARVGKTDTTSWMEMISRGVPYKGKK VDILVRVTVFSGKREAKVEAVSLTGEKVQFATGVNYFKDCATKKGADYIAVWGKHPEDVAAEIVEVGGAIKYNPKDFEKT TDDGTQYLLISKPAKNLETTILSSCARETELNTLDKLEAYIKK
Sequences:
>Translated_283_residues MKLSIVTSLLFCCVCFGQNNTDNSLYMKSDKITYLTDIGSESGDLYKTIGHHGPAVENEWMALRIYFSDKVAIDVYSKAK PGLELRKANWYPTPEQQKEGWGADYYKVASTVGLGGVKLWDGEKVVPLNPVTNRLARVGKTDTTSWMEMISRGVPYKGKK VDILVRVTVFSGKREAKVEAVSLTGEKVQFATGVNYFKDCATKKGADYIAVWGKHPEDVAAEIVEVGGAIKYNPKDFEKT TDDGTQYLLISKPAKNLETTILSSCARETELNTLDKLEAYIKK >Mature_283_residues MKLSIVTSLLFCCVCFGQNNTDNSLYMKSDKITYLTDIGSESGDLYKTIGHHGPAVENEWMALRIYFSDKVAIDVYSKAK PGLELRKANWYPTPEQQKEGWGADYYKVASTVGLGGVKLWDGEKVVPLNPVTNRLARVGKTDTTSWMEMISRGVPYKGKK VDILVRVTVFSGKREAKVEAVSLTGEKVQFATGVNYFKDCATKKGADYIAVWGKHPEDVAAEIVEVGGAIKYNPKDFEKT TDDGTQYLLISKPAKNLETTILSSCARETELNTLDKLEAYIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31436; Mature: 31436
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSIVTSLLFCCVCFGQNNTDNSLYMKSDKITYLTDIGSESGDLYKTIGHHGPAVENEW CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCE MALRIYFSDKVAIDVYSKAKPGLELRKANWYPTPEQQKEGWGADYYKVASTVGLGGVKLW EEEEEEECCEEEEEEECCCCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHCCCCCEEEE DGEKVVPLNPVTNRLARVGKTDTTSWMEMISRGVPYKGKKVDILVRVTVFSGKREAKVEA CCCEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEE VSLTGEKVQFATGVNYFKDCATKKGADYIAVWGKHPEDVAAEIVEVGGAIKYNPKDFEKT EEECCCEEEEHHCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCC TDDGTQYLLISKPAKNLETTILSSCARETELNTLDKLEAYIKK CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLSIVTSLLFCCVCFGQNNTDNSLYMKSDKITYLTDIGSESGDLYKTIGHHGPAVENEW CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCE MALRIYFSDKVAIDVYSKAKPGLELRKANWYPTPEQQKEGWGADYYKVASTVGLGGVKLW EEEEEEECCEEEEEEECCCCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHCCCCCEEEE DGEKVVPLNPVTNRLARVGKTDTTSWMEMISRGVPYKGKKVDILVRVTVFSGKREAKVEA CCCEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEE VSLTGEKVQFATGVNYFKDCATKKGADYIAVWGKHPEDVAAEIVEVGGAIKYNPKDFEKT EEECCCEEEEHHCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCC TDDGTQYLLISKPAKNLETTILSSCARETELNTLDKLEAYIKK CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA