Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300857

Identifier: 146300857

GI number: 146300857

Start: 3683032

End: 3685500

Strand: Reverse

Name: 146300857

Synonym: Fjoh_3112

Alternate gene names: NA

Gene position: 3685500-3683032 (Counterclockwise)

Preceding gene: 146300858

Following gene: 146300856

Centisome position: 60.45

GC content: 37.26

Gene sequence:

>2469_bases
ATGCTGCATAATTTTTTAAGAAAGGGTTTTGTTTTTATTTCTGTAATTGCCGGATTTTCTGGTTACGCGCAGGATTTAAA
ACTGCAATACAATCAGCCTGCGGTTGAATGGACAGAAGCTCTGCCAATTGGAAACGGAACGCTTGGCGCAATGGTTTTTG
GTCGCGTAGATTCAGAATTAATTCAATTAAACGAAGCGACTTTATGGAGCGGCGGACCTGTTCAGAAAAATGTAAATCCA
AATGCATTTCAAAATCTGGCTCTAATTAGAGAAGCCCTTAAAGCGGAAGATTTTGACAAAGCTTATAATCTGACCAAAAA
TATGCAGGGCGCTTATAGTGAAAGTTTTATGCCTTTGGGAGATCTTTTACTAACGCAGGATTTAGGCAGCAAAAAAACGG
ATTTTTACAATAGAAGTCTGGACATTCAAACTGGATTAGCAGTGACTAATTTTAAAGCCGACGGCGTAAATTATAAAAGA
GAAATCTTTGCATCGGCGCCTGCGAAATGTATTGTAATGAAACTTTCGGCAGACCAGCTGAAAAAACTTTCGGTTTCAAT
TGACGCTTCCAGTCTTTTAAAAAATCAAAAAGAAATACAAAATCAGTCATTGGTTTTAAAAGGAAAAGCGCCTTCACATG
CCGATCCGAATTATATTGATTACAATAAAGAGCCTGTTATTTATGACGATCCAGCTGGATGCCGCGGAATGCGTTTTGAA
TTAATCGTAAAACCAATTGTAAAAGACGGAACGGTAAGTTATGAAGGAAACAAAATAGTGATTAAAAATGCTTCAGAAAT
AGTACTTTTTATCTCGGCTGCAACCAGTTTCAACGGATTTGATAAATGTCCCGACAGTCAGGGAAAAGACGAACATGCTT
TTGCTGAAAACCCAATTAAAAAAGCATCAGTCAAAAAATATGATATTTTAGTTAAAGAACATCTTCAGGATTTTCAAAAA
TTCTTCAATAGAGTTTCTTTACAATTGAATGAAAAAGAAACCCATAAATCCAATCTTCCAACTGATATTCGTTTGGAACA
ATATGCCAAAGGAGAAAAAGATGCTGGATTAGAAGCTTTATTTTTTCAATACGGACGTTATTTATTGATTTCTTCATCGC
GTACACACAACGCACCAGCCAATTTACAGGGAATCTGGAACAATAAATTGCGTGCGCCGTGGAGCAGTAATTATACAACC
AATATCAATTTGCAGATGAATTATTGGCCTGTTGAATCGGCAAGTTTATCAGAATTGTTTTTTCCGCTTGACGATTTTGT
AAAAAATGTTTCTGTAACAGGAGCCGAAACTGCCAAAAGTTATTATCATGCCAACGGCTGGGTTTTGCATCATAACTCAG
ACATCTGGGCAACGACAAATCCTGTCGGCGATTTTGGAAAAGGAGATCCAATGTGGGCCAACTGGTATATGGGAGCTAAC
TGGTTAAGCAGACATTTATGGGAACATTATCAATATACAGGCGACACAGAATATCTTAAAAAAGTATATCCAATTATAAA
AGGCGCCGCAGAATTTAGTTTAGACTGGTTGCAACAAGACAAAAACGGCTATTTAGTTACGATGCCATCGACTTCTCCAG
AAAATAAATATTTCTATGACGGAAAAAAAGGAGGCGTAGTAACAACGGCTTCTACAATGGATATTGGCATTATAAAAGAT
TTGTTTGAAAATACGAGTCAAGCTTCTAAAATTCTAAATATCGACGCTGATTTTAGACAGAAAGTTGATAAAGCAGCCAA
TCAATTATTACCTTTTCAGATAGGCGCAAAAGGACAGCTTCAGGAATGGTATAAAGATTTTGAAGACGAAGACCCGCATC
ACAGACATACCTCGCATTTGTATGCCTTGCATCCTGCTAATTTAATTTCACCTTTAAACACACCAGAATTAGCCGCAGCA
GCTAAGAAAACTTTAGAATTAAGAGGAGACGACGGAACAGGCTGGAGTCTGGCATGGAAAGTAAATATGTGGGCGAGACT
TTTGGACGGAAATCATGCTTATAAGTTATTCAAGAATCAGCTGCGATTGACAAAAGATAATGATCCAAAATACAAACGAC
AAGGAGGCTGTTATCCCAATCTTTTTGATGCGCATCCGCCATTTCAGATCGATGGCAATTTTGCTGGAACGGCAGGAGTA
ATCGAGATGCTGATGCAGAGTCAGAACAATGAAATTCATTTGCTTCCTGCTTTACCAGACGATTGGAAAGAAGGCGAAAT
TAAAGGAATTACGGCAAAAGGAAATTTCACTGTAAATATAAAATGGAACGACGGAAAAATGAGCCAGACTAAAATCGTAT
CGAATAATGGAGGAACTTGTAAAATAAGATCTTCGGAACCTTTTGTAATTGAAAAACTGAATATCAAAAGCGAGAAATCA
TCTATTGGATATACGGCTGTATTTGAGACCAAAAAAGGCACATCTTACATCATAAATCCTCTTCAATAA

Upstream 100 bases:

>100_bases
TTATTCTGTTACTGTTTTGAAATTGAAAACGATTTAATTAATTATAAATTATAAATTATCAATTATCAATTATCAATTAT
AAATCATTAATTAAAGATAC

Downstream 100 bases:

>100_bases
TTTTTCATTTAATAAACTAAAAAATACCATCGTGTTTAAAAATAAGATCTTACTGCCCGTACTTTTTCTTTCGTGTTTTT
CTGCATTTGCTCAAATCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Trehalose And Maltose Hydrolase-Like Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Fibronectin Type III Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein; 1 2-A-L-Fucosidase

Number of amino acids: Translated: 822; Mature: 822

Protein sequence:

>822_residues
MLHNFLRKGFVFISVIAGFSGYAQDLKLQYNQPAVEWTEALPIGNGTLGAMVFGRVDSELIQLNEATLWSGGPVQKNVNP
NAFQNLALIREALKAEDFDKAYNLTKNMQGAYSESFMPLGDLLLTQDLGSKKTDFYNRSLDIQTGLAVTNFKADGVNYKR
EIFASAPAKCIVMKLSADQLKKLSVSIDASSLLKNQKEIQNQSLVLKGKAPSHADPNYIDYNKEPVIYDDPAGCRGMRFE
LIVKPIVKDGTVSYEGNKIVIKNASEIVLFISAATSFNGFDKCPDSQGKDEHAFAENPIKKASVKKYDILVKEHLQDFQK
FFNRVSLQLNEKETHKSNLPTDIRLEQYAKGEKDAGLEALFFQYGRYLLISSSRTHNAPANLQGIWNNKLRAPWSSNYTT
NINLQMNYWPVESASLSELFFPLDDFVKNVSVTGAETAKSYYHANGWVLHHNSDIWATTNPVGDFGKGDPMWANWYMGAN
WLSRHLWEHYQYTGDTEYLKKVYPIIKGAAEFSLDWLQQDKNGYLVTMPSTSPENKYFYDGKKGGVVTTASTMDIGIIKD
LFENTSQASKILNIDADFRQKVDKAANQLLPFQIGAKGQLQEWYKDFEDEDPHHRHTSHLYALHPANLISPLNTPELAAA
AKKTLELRGDDGTGWSLAWKVNMWARLLDGNHAYKLFKNQLRLTKDNDPKYKRQGGCYPNLFDAHPPFQIDGNFAGTAGV
IEMLMQSQNNEIHLLPALPDDWKEGEIKGITAKGNFTVNIKWNDGKMSQTKIVSNNGGTCKIRSSEPFVIEKLNIKSEKS
SIGYTAVFETKKGTSYIINPLQ

Sequences:

>Translated_822_residues
MLHNFLRKGFVFISVIAGFSGYAQDLKLQYNQPAVEWTEALPIGNGTLGAMVFGRVDSELIQLNEATLWSGGPVQKNVNP
NAFQNLALIREALKAEDFDKAYNLTKNMQGAYSESFMPLGDLLLTQDLGSKKTDFYNRSLDIQTGLAVTNFKADGVNYKR
EIFASAPAKCIVMKLSADQLKKLSVSIDASSLLKNQKEIQNQSLVLKGKAPSHADPNYIDYNKEPVIYDDPAGCRGMRFE
LIVKPIVKDGTVSYEGNKIVIKNASEIVLFISAATSFNGFDKCPDSQGKDEHAFAENPIKKASVKKYDILVKEHLQDFQK
FFNRVSLQLNEKETHKSNLPTDIRLEQYAKGEKDAGLEALFFQYGRYLLISSSRTHNAPANLQGIWNNKLRAPWSSNYTT
NINLQMNYWPVESASLSELFFPLDDFVKNVSVTGAETAKSYYHANGWVLHHNSDIWATTNPVGDFGKGDPMWANWYMGAN
WLSRHLWEHYQYTGDTEYLKKVYPIIKGAAEFSLDWLQQDKNGYLVTMPSTSPENKYFYDGKKGGVVTTASTMDIGIIKD
LFENTSQASKILNIDADFRQKVDKAANQLLPFQIGAKGQLQEWYKDFEDEDPHHRHTSHLYALHPANLISPLNTPELAAA
AKKTLELRGDDGTGWSLAWKVNMWARLLDGNHAYKLFKNQLRLTKDNDPKYKRQGGCYPNLFDAHPPFQIDGNFAGTAGV
IEMLMQSQNNEIHLLPALPDDWKEGEIKGITAKGNFTVNIKWNDGKMSQTKIVSNNGGTCKIRSSEPFVIEKLNIKSEKS
SIGYTAVFETKKGTSYIINPLQ
>Mature_822_residues
MLHNFLRKGFVFISVIAGFSGYAQDLKLQYNQPAVEWTEALPIGNGTLGAMVFGRVDSELIQLNEATLWSGGPVQKNVNP
NAFQNLALIREALKAEDFDKAYNLTKNMQGAYSESFMPLGDLLLTQDLGSKKTDFYNRSLDIQTGLAVTNFKADGVNYKR
EIFASAPAKCIVMKLSADQLKKLSVSIDASSLLKNQKEIQNQSLVLKGKAPSHADPNYIDYNKEPVIYDDPAGCRGMRFE
LIVKPIVKDGTVSYEGNKIVIKNASEIVLFISAATSFNGFDKCPDSQGKDEHAFAENPIKKASVKKYDILVKEHLQDFQK
FFNRVSLQLNEKETHKSNLPTDIRLEQYAKGEKDAGLEALFFQYGRYLLISSSRTHNAPANLQGIWNNKLRAPWSSNYTT
NINLQMNYWPVESASLSELFFPLDDFVKNVSVTGAETAKSYYHANGWVLHHNSDIWATTNPVGDFGKGDPMWANWYMGAN
WLSRHLWEHYQYTGDTEYLKKVYPIIKGAAEFSLDWLQQDKNGYLVTMPSTSPENKYFYDGKKGGVVTTASTMDIGIIKD
LFENTSQASKILNIDADFRQKVDKAANQLLPFQIGAKGQLQEWYKDFEDEDPHHRHTSHLYALHPANLISPLNTPELAAA
AKKTLELRGDDGTGWSLAWKVNMWARLLDGNHAYKLFKNQLRLTKDNDPKYKRQGGCYPNLFDAHPPFQIDGNFAGTAGV
IEMLMQSQNNEIHLLPALPDDWKEGEIKGITAKGNFTVNIKWNDGKMSQTKIVSNNGGTCKIRSSEPFVIEKLNIKSEKS
SIGYTAVFETKKGTSYIINPLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92396; Mature: 92396

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHNFLRKGFVFISVIAGFSGYAQDLKLQYNQPAVEWTEALPIGNGTLGAMVFGRVDSEL
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHEEECCCHHH
IQLNEATLWSGGPVQKNVNPNAFQNLALIREALKAEDFDKAYNLTKNMQGAYSESFMPLG
HEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCHH
DLLLTQDLGSKKTDFYNRSLDIQTGLAVTNFKADGVNYKREIFASAPAKCIVMKLSADQL
HHHHHHCCCCCCCHHCCCEEEEECCEEEEEEECCCCCHHHHHHHCCCCEEEEEEECHHHH
KKLSVSIDASSLLKNQKEIQNQSLVLKGKAPSHADPNYIDYNKEPVIYDDPAGCRGMRFE
HHEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCCCCEEECCCCCCCCCEEE
LIVKPIVKDGTVSYEGNKIVIKNASEIVLFISAATSFNGFDKCPDSQGKDEHAFAENPIK
EEEEEHHCCCEEEECCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCC
KASVKKYDILVKEHLQDFQKFFNRVSLQLNEKETHKSNLPTDIRLEQYAKGEKDAGLEAL
CCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCHHHHHCCCCCCCHHHH
FFQYGRYLLISSSRTHNAPANLQGIWNNKLRAPWSSNYTTNINLQMNYWPVESASLSELF
HHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHH
FPLDDFVKNVSVTGAETAKSYYHANGWVLHHNSDIWATTNPVGDFGKGDPMWANWYMGAN
CCHHHHHHCCCCCCHHHHHHEEECCCEEEEECCCEEEECCCCCCCCCCCCCEEEEECCHH
WLSRHLWEHYQYTGDTEYLKKVYPIIKGAAEFSLDWLQQDKNGYLVTMPSTSPENKYFYD
HHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEC
GKKGGVVTTASTMDIGIIKDLFENTSQASKILNIDADFRQKVDKAANQLLPFQIGAKGQL
CCCCCEEEEECCCCHHHHHHHHHCHHHHHHEEECCHHHHHHHHHHHHHCCCEEECCCCCH
QEWYKDFEDEDPHHRHTSHLYALHPANLISPLNTPELAAAAKKTLELRGDDGTGWSLAWK
HHHHHCCCCCCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEE
VNMWARLLDGNHAYKLFKNQLRLTKDNDPKYKRQGGCYPNLFDAHPPFQIDGNFAGTAGV
EEEEHHHHCCCHHHHHHHHHHEEECCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCHHHH
IEMLMQSQNNEIHLLPALPDDWKEGEIKGITAKGNFTVNIKWNDGKMSQTKIVSNNGGTC
HHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEEECCCCCCEEEEEECCCCEE
KIRSSEPFVIEKLNIKSEKSSIGYTAVFETKKGTSYIINPLQ
EEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCC
>Mature Secondary Structure
MLHNFLRKGFVFISVIAGFSGYAQDLKLQYNQPAVEWTEALPIGNGTLGAMVFGRVDSEL
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHEEECCCHHH
IQLNEATLWSGGPVQKNVNPNAFQNLALIREALKAEDFDKAYNLTKNMQGAYSESFMPLG
HEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCHH
DLLLTQDLGSKKTDFYNRSLDIQTGLAVTNFKADGVNYKREIFASAPAKCIVMKLSADQL
HHHHHHCCCCCCCHHCCCEEEEECCEEEEEEECCCCCHHHHHHHCCCCEEEEEEECHHHH
KKLSVSIDASSLLKNQKEIQNQSLVLKGKAPSHADPNYIDYNKEPVIYDDPAGCRGMRFE
HHEEEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCCCCEEECCCCCCCCCEEE
LIVKPIVKDGTVSYEGNKIVIKNASEIVLFISAATSFNGFDKCPDSQGKDEHAFAENPIK
EEEEEHHCCCEEEECCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCC
KASVKKYDILVKEHLQDFQKFFNRVSLQLNEKETHKSNLPTDIRLEQYAKGEKDAGLEAL
CCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCHHHHHCCCCCCCHHHH
FFQYGRYLLISSSRTHNAPANLQGIWNNKLRAPWSSNYTTNINLQMNYWPVESASLSELF
HHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHH
FPLDDFVKNVSVTGAETAKSYYHANGWVLHHNSDIWATTNPVGDFGKGDPMWANWYMGAN
CCHHHHHHCCCCCCHHHHHHEEECCCEEEEECCCEEEECCCCCCCCCCCCCEEEEECCHH
WLSRHLWEHYQYTGDTEYLKKVYPIIKGAAEFSLDWLQQDKNGYLVTMPSTSPENKYFYD
HHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEC
GKKGGVVTTASTMDIGIIKDLFENTSQASKILNIDADFRQKVDKAANQLLPFQIGAKGQL
CCCCCEEEEECCCCHHHHHHHHHCHHHHHHEEECCHHHHHHHHHHHHHCCCEEECCCCCH
QEWYKDFEDEDPHHRHTSHLYALHPANLISPLNTPELAAAAKKTLELRGDDGTGWSLAWK
HHHHHCCCCCCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEE
VNMWARLLDGNHAYKLFKNQLRLTKDNDPKYKRQGGCYPNLFDAHPPFQIDGNFAGTAGV
EEEEHHHHCCCHHHHHHHHHHEEECCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCHHHH
IEMLMQSQNNEIHLLPALPDDWKEGEIKGITAKGNFTVNIKWNDGKMSQTKIVSNNGGTC
HHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEEECCCCCCEEEEEECCCCEE
KIRSSEPFVIEKLNIKSEKSSIGYTAVFETKKGTSYIINPLQ
EEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA