Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is yfcX [C]
Identifier: 146300845
GI number: 146300845
Start: 3669140
End: 3669943
Strand: Direct
Name: yfcX [C]
Synonym: Fjoh_3100
Alternate gene names: 146300845
Gene position: 3669140-3669943 (Clockwise)
Preceding gene: 146300843
Following gene: 146300846
Centisome position: 60.18
GC content: 40.3
Gene sequence:
>804_bases ATGATTTTTACCACACACAAAATTACAAATGGATACTGGAAAATCAGTTTCAACAATCCTCCTATTAACATGTTTGATAC CGAATTTTCTAAACAGTTAATGACTATAATGGACGAACTGGAGTCAAATGAAAACCTAAAAGTTGTAGTCTTTGAGAGTG AAAATCCAGACTTTTTTGTTGCTCATGTAGAATTGCTAAATGTTGGAGACTTTCCAAAAGGAACCGGAAAAACAGGCCTT TCTATAGCTTGGCCAGATATTGCGCGCAGACTGGAACTTGCCCCTTTTGTAACCATAGCTTCCATCCGTGGCCGTGCCAG AGGACTTGGAAGTGAATTTGCACAAGCATTTGATTTACGCTTTGCCAGCAGAGAGAAAGCATTCTTGGCTCAGGTAGAAA TAGGAATAGGTTCATTTCCTGGTGGCGGAGGACTTGAGCGTCTGCATCTCCTTACAGGACGCAGCCGAGCTCTTGAAATT ATTTTAAGCGGTAACGATTATGATGCAGATACGGCCGCTTTCTATGGCTGGATAAACCGTTCAATTCCAGACGCTGAACT GGATGAATATGTTGAAAAATTTGCAAAGCGCATAGATTCATTTGACAAAAAACCAATTGCTGCCATAAAGCAGATTATGA ACCAAAGAGCCAAACTTCCTTCAAACGAAGAAATTTTAGACACACAGGTTAAATTCTTTGCTTCACTTGAGGAGCCGGAA GCGCGCAATCGTATTAAGAATCTATTTGAAAGAGGACTCCAGCAAAATGGCGATCTGGAACTAAATCTTGCTAATAACAT CTAA
Upstream 100 bases:
>100_bases TTATTATTTCAACTACTTGCATTTTGCAAGTAAATTTAATTATATTTGTACTTTCAATTTGCAAGTAAAATTACAAAAAA TTAACCAAAACGACTACATT
Downstream 100 bases:
>100_bases AAATATGAAAGCATACATCTTCCCTAAATATGGCAAAACAGAAAAATTATTACTCAGCGATGTAAAAATACCTGAAATTG GAGATTATGAGGTATTAGTA
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MIFTTHKITNGYWKISFNNPPINMFDTEFSKQLMTIMDELESNENLKVVVFESENPDFFVAHVELLNVGDFPKGTGKTGL SIAWPDIARRLELAPFVTIASIRGRARGLGSEFAQAFDLRFASREKAFLAQVEIGIGSFPGGGGLERLHLLTGRSRALEI ILSGNDYDADTAAFYGWINRSIPDAELDEYVEKFAKRIDSFDKKPIAAIKQIMNQRAKLPSNEEILDTQVKFFASLEEPE ARNRIKNLFERGLQQNGDLELNLANNI
Sequences:
>Translated_267_residues MIFTTHKITNGYWKISFNNPPINMFDTEFSKQLMTIMDELESNENLKVVVFESENPDFFVAHVELLNVGDFPKGTGKTGL SIAWPDIARRLELAPFVTIASIRGRARGLGSEFAQAFDLRFASREKAFLAQVEIGIGSFPGGGGLERLHLLTGRSRALEI ILSGNDYDADTAAFYGWINRSIPDAELDEYVEKFAKRIDSFDKKPIAAIKQIMNQRAKLPSNEEILDTQVKFFASLEEPE ARNRIKNLFERGLQQNGDLELNLANNI >Mature_267_residues MIFTTHKITNGYWKISFNNPPINMFDTEFSKQLMTIMDELESNENLKVVVFESENPDFFVAHVELLNVGDFPKGTGKTGL SIAWPDIARRLELAPFVTIASIRGRARGLGSEFAQAFDLRFASREKAFLAQVEIGIGSFPGGGGLERLHLLTGRSRALEI ILSGNDYDADTAAFYGWINRSIPDAELDEYVEKFAKRIDSFDKKPIAAIKQIMNQRAKLPSNEEILDTQVKFFASLEEPE ARNRIKNLFERGLQQNGDLELNLANNI
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=192, Percent_Identity=26.0416666666667, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI194097323, Length=117, Percent_Identity=37.6068376068376, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1788682, Length=177, Percent_Identity=31.638418079096, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788597, Length=241, Percent_Identity=22.8215767634855, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1790281, Length=186, Percent_Identity=30.6451612903226, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787659, Length=202, Percent_Identity=27.7227722772277, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25144276, Length=206, Percent_Identity=29.126213592233, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17508951, Length=206, Percent_Identity=29.126213592233, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508953, Length=206, Percent_Identity=29.126213592233, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17558304, Length=186, Percent_Identity=26.8817204301075, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17554946, Length=196, Percent_Identity=26.530612244898, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI20129971, Length=201, Percent_Identity=26.3681592039801, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24653477, Length=201, Percent_Identity=26.3681592039801, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 30066; Mature: 30066
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFTTHKITNGYWKISFNNPPINMFDTEFSKQLMTIMDELESNENLKVVVFESENPDFFV CEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE AHVELLNVGDFPKGTGKTGLSIAWPDIARRLELAPFVTIASIRGRARGLGSEFAQAFDLR EEEEEEECCCCCCCCCCCCCEEECHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHH FASREKAFLAQVEIGIGSFPGGGGLERLHLLTGRSRALEIILSGNDYDADTAAFYGWINR HHCCCHHEEEEEEECCCCCCCCCCHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHCC SIPDAELDEYVEKFAKRIDSFDKKPIAAIKQIMNQRAKLPSNEEILDTQVKFFASLEEPE CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH ARNRIKNLFERGLQQNGDLELNLANNI HHHHHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure MIFTTHKITNGYWKISFNNPPINMFDTEFSKQLMTIMDELESNENLKVVVFESENPDFFV CEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE AHVELLNVGDFPKGTGKTGLSIAWPDIARRLELAPFVTIASIRGRARGLGSEFAQAFDLR EEEEEEECCCCCCCCCCCCCEEECHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHH FASREKAFLAQVEIGIGSFPGGGGLERLHLLTGRSRALEIILSGNDYDADTAAFYGWINR HHCCCHHEEEEEEECCCCCCCCCCHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHCC SIPDAELDEYVEKFAKRIDSFDKKPIAAIKQIMNQRAKLPSNEEILDTQVKFFASLEEPE CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH ARNRIKNLFERGLQQNGDLELNLANNI HHHHHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA