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The map label for this gene is ygaV [C]

Identifier: 146300833

GI number: 146300833

Start: 3656906

End: 3657280

Strand: Direct

Name: ygaV [C]

Synonym: Fjoh_3088

Alternate gene names: 146300833

Gene position: 3656906-3657280 (Clockwise)

Preceding gene: 146300832

Following gene: 146300834

Centisome position: 59.98

GC content: 31.73

Gene sequence:

>375_bases
ATGGAAGATATAATTTGTATACGACAGCAAGCAGATATTAAACAAATAATCCGCTGTAAAGACAGAGTATCAGAACTCAA
TACCTCATTTGACTATTTATCAAGTGGGCTTGAATTGGCTGGCAATAATGTGAGATTAAGAATTCTCTTTTTACTTTATG
AAGAAAAACAGCTCTGTGTCTGTGACATAAGTGATATTCTTGAAATGAGTATTTCTGCAATTTCACAGCACTTACGGAAA
CTAAAAGACAGAAAACTTATTGAAACTAAACGGGAAGCGCAGACCATTTTCTATTCATTGACAAAGGAATATGAAAAAAT
GCTGAAACCTTTCTTCGAAATTTTAGCACAAAATGAAATTTTAGAAAAAATATGA

Upstream 100 bases:

>100_bases
AAGTTGTCTTTTTTTATGGGCAGGAATCATTCAAAATTTTAATTCAATTATTTTGTATTTTAGCATTTGCTTAAATAAGC
AAAAAGTATAAATTTGCATT

Downstream 100 bases:

>100_bases
AAACAGAGAATAAAATGATCGGAGCCGGATTTTTCACAGCATTAGCTGCTTCATTGTGCTGCATTACTCCCATATTAGCA
TTAGTTGCCGGAACAAGCGG

Product: regulatory protein ArsR

Products: NA

Alternate protein names: Regulatory Protein Arsr; Transcriptional Regulator; ArsR Family Transcriptional Regulator; Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Cadmium Efflux System Accessory Protein; Transcriptional Repressor Smtb

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MEDIICIRQQADIKQIIRCKDRVSELNTSFDYLSSGLELAGNNVRLRILFLLYEEKQLCVCDISDILEMSISAISQHLRK
LKDRKLIETKREAQTIFYSLTKEYEKMLKPFFEILAQNEILEKI

Sequences:

>Translated_124_residues
MEDIICIRQQADIKQIIRCKDRVSELNTSFDYLSSGLELAGNNVRLRILFLLYEEKQLCVCDISDILEMSISAISQHLRK
LKDRKLIETKREAQTIFYSLTKEYEKMLKPFFEILAQNEILEKI
>Mature_124_residues
MEDIICIRQQADIKQIIRCKDRVSELNTSFDYLSSGLELAGNNVRLRILFLLYEEKQLCVCDISDILEMSISAISQHLRK
LKDRKLIETKREAQTIFYSLTKEYEKMLKPFFEILAQNEILEKI

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14633; Mature: 14633

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDIICIRQQADIKQIIRCKDRVSELNTSFDYLSSGLELAGNNVRLRILFLLYEEKQLCV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHH
CDISDILEMSISAISQHLRKLKDRKLIETKREAQTIFYSLTKEYEKMLKPFFEILAQNEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKI
HHCC
>Mature Secondary Structure
MEDIICIRQQADIKQIIRCKDRVSELNTSFDYLSSGLELAGNNVRLRILFLLYEEKQLCV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHH
CDISDILEMSISAISQHLRKLKDRKLIETKREAQTIFYSLTKEYEKMLKPFFEILAQNEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKI
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA