Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300831

Identifier: 146300831

GI number: 146300831

Start: 3655309

End: 3655872

Strand: Direct

Name: 146300831

Synonym: Fjoh_3086

Alternate gene names: NA

Gene position: 3655309-3655872 (Clockwise)

Preceding gene: 146300830

Following gene: 146300832

Centisome position: 59.95

GC content: 36.17

Gene sequence:

>564_bases
ATGGAAACAGCAATTATCATTTCATCCTTCTTTCTTGTCCTATTTGCAGTCTTAGCCTTATATGATGGCGTTTATCTGCA
TATTTTCAAATACCAGCTCCATAATCGGGAAGAAAGCAAAACCGAGCATATTACCCATACTTTGAGAGCTGTTTTCTTTC
CGGCAATCCTTTATTTTCTGTTCTTGAAACAGGATAATCATACTAGTTTTGTAATAGGTTTAACCATAGTTCTTTTGGAT
ATAATGGTGCTAGGGTACGACGCTTTTATAGAGAAAGACAGCAGGCAGTTTATGGGAGGGCTTCCGCGCTGGGAATATAT
TGTCCATTTATTCGTAAATGGGTTTCATTTTGCGTCAATTGCAGTTTACCTCTCCATCAGACTTACTTTTCAAAATGGGG
AAATAATGATTTCTAATATCAATCAATCTCCAGGCTTCTTCAATTTGTTAATTGTAAATCTTTTACCCGGAACTATCGCA
ATGGCAATTCTTCATGTTTTCTTATGCATGCCAAAAACAGCCCATATCTGGAATAATTTCAGAGCTAAAATCAATTGTTG
CTAA

Upstream 100 bases:

>100_bases
AGGATCAGAAAAGAAATTACCCAGTAAATTCGAGGACATTTGTCCTTTTTGCTGATTATACTTTCCAATAGTTTTGCTTT
TATAACCAATTTAAAATAAA

Downstream 100 bases:

>100_bases
TCCTGCTTTCTTAATAAACAGAACATAAAATCTATGAGTTTGGAAATAAATACTATTCACAATCAGTTTTATATCATTTT
GGGCAGGTATATTAAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFLFLKQDNHTSFVIGLTIVLLD
IMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASIAVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIA
MAILHVFLCMPKTAHIWNNFRAKINCC

Sequences:

>Translated_187_residues
METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFLFLKQDNHTSFVIGLTIVLLD
IMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASIAVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIA
MAILHVFLCMPKTAHIWNNFRAKINCC
>Mature_187_residues
METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFLFLKQDNHTSFVIGLTIVLLD
IMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASIAVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIA
MAILHVFLCMPKTAHIWNNFRAKINCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21569; Mature: 21569

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FLKQDNHTSFVIGLTIVLLDIMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCHHHHHE
AVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIAMAILHVFLCMPKTAHIWNNF
EEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCC
RAKINCC
CEEEECC
>Mature Secondary Structure
METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FLKQDNHTSFVIGLTIVLLDIMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASI
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCHHHHHE
AVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIAMAILHVFLCMPKTAHIWNNF
EEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCC
RAKINCC
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA