| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300831
Identifier: 146300831
GI number: 146300831
Start: 3655309
End: 3655872
Strand: Direct
Name: 146300831
Synonym: Fjoh_3086
Alternate gene names: NA
Gene position: 3655309-3655872 (Clockwise)
Preceding gene: 146300830
Following gene: 146300832
Centisome position: 59.95
GC content: 36.17
Gene sequence:
>564_bases ATGGAAACAGCAATTATCATTTCATCCTTCTTTCTTGTCCTATTTGCAGTCTTAGCCTTATATGATGGCGTTTATCTGCA TATTTTCAAATACCAGCTCCATAATCGGGAAGAAAGCAAAACCGAGCATATTACCCATACTTTGAGAGCTGTTTTCTTTC CGGCAATCCTTTATTTTCTGTTCTTGAAACAGGATAATCATACTAGTTTTGTAATAGGTTTAACCATAGTTCTTTTGGAT ATAATGGTGCTAGGGTACGACGCTTTTATAGAGAAAGACAGCAGGCAGTTTATGGGAGGGCTTCCGCGCTGGGAATATAT TGTCCATTTATTCGTAAATGGGTTTCATTTTGCGTCAATTGCAGTTTACCTCTCCATCAGACTTACTTTTCAAAATGGGG AAATAATGATTTCTAATATCAATCAATCTCCAGGCTTCTTCAATTTGTTAATTGTAAATCTTTTACCCGGAACTATCGCA ATGGCAATTCTTCATGTTTTCTTATGCATGCCAAAAACAGCCCATATCTGGAATAATTTCAGAGCTAAAATCAATTGTTG CTAA
Upstream 100 bases:
>100_bases AGGATCAGAAAAGAAATTACCCAGTAAATTCGAGGACATTTGTCCTTTTTGCTGATTATACTTTCCAATAGTTTTGCTTT TATAACCAATTTAAAATAAA
Downstream 100 bases:
>100_bases TCCTGCTTTCTTAATAAACAGAACATAAAATCTATGAGTTTGGAAATAAATACTATTCACAATCAGTTTTATATCATTTT GGGCAGGTATATTAAGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFLFLKQDNHTSFVIGLTIVLLD IMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASIAVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIA MAILHVFLCMPKTAHIWNNFRAKINCC
Sequences:
>Translated_187_residues METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFLFLKQDNHTSFVIGLTIVLLD IMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASIAVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIA MAILHVFLCMPKTAHIWNNFRAKINCC >Mature_187_residues METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFLFLKQDNHTSFVIGLTIVLLD IMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASIAVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIA MAILHVFLCMPKTAHIWNNFRAKINCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21569; Mature: 21569
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFL CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLKQDNHTSFVIGLTIVLLDIMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCHHHHHE AVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIAMAILHVFLCMPKTAHIWNNF EEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCC RAKINCC CEEEECC >Mature Secondary Structure METAIIISSFFLVLFAVLALYDGVYLHIFKYQLHNREESKTEHITHTLRAVFFPAILYFL CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLKQDNHTSFVIGLTIVLLDIMVLGYDAFIEKDSRQFMGGLPRWEYIVHLFVNGFHFASI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCHHHHHE AVYLSIRLTFQNGEIMISNINQSPGFFNLLIVNLLPGTIAMAILHVFLCMPKTAHIWNNF EEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCC RAKINCC CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA