| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300827
Identifier: 146300827
GI number: 146300827
Start: 3652199
End: 3652813
Strand: Direct
Name: 146300827
Synonym: Fjoh_3082
Alternate gene names: NA
Gene position: 3652199-3652813 (Clockwise)
Preceding gene: 146300826
Following gene: 146300828
Centisome position: 59.9
GC content: 43.74
Gene sequence:
>615_bases ATGTTATATCCACAAATTGAGAATACCGTTAAATCATTTGATTTTAAGCAGATCTCCGAGGATCGCAAAACAGTCCTGCA GCCATTAATCGACTTCATTCAGACTAAAGTGGACAGTAAGCTGGAAACCAGACTAAACCTAATCTGCACGCACAATTCCA GAAGAAGCCATCTTTCGCAGGTTTGGGCTCAGACTGCTGCCGCCTATTACGGCATCAAAAACGTTTCATGCTATTCAGGA GGAACAGAGGCTACCGCCCTTTTCCCAATGGCAGCGGAGACTTTGAAGGATTCAGGATTCAACATCAAAACGCTTTCAGA GGGATCAAACCCGGTTTATTCCATAAAATATTCAGCTGACGAACTTCCTGTCATCGGTTTTTCCAAAACCTATGATGATG ACTTCAATCCTGAAAGCGGATTCGCCGCAATAATGACCTGCTCGCAGGCTGACGGCGGATGCCCCTTTATAGCAGGCGCT GAGAAAAGAATCCCGATTACCTTTGAAGATCCAAAAATTTCCGACGGAACGCCTCAGCAGAAAGAAACTTATCTGGAGCG AAGCCTGCAGATAGGAACTGAAATGTTTTACGTATTCTCACAAATAAAAAAATAA
Upstream 100 bases:
>100_bases ATCTCAGTTAAATACTGACAATGCTAATTCATGCACTCCGGGCGGAGGATGCTGCTAATCATTAAACAGATAATCAATAA ACCTTTACAGCCAAAAAACT
Downstream 100 bases:
>100_bases AATGTCAGCAAATAACTGTGCACCAGCCGTCGGACGCAAAAAATTAAGCTTCCTTGACCGCTTCTTGACCCTTTGGATTT TCCTTGCTATGGCAATAGGC
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Protein Tyrosine Phosphatase; Protein-Tyrosine-Phosphatase; Low Molecular Weight Phosphatase Family Protein; ArsC-Like Arsenate Reductase
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLYPQIENTVKSFDFKQISEDRKTVLQPLIDFIQTKVDSKLETRLNLICTHNSRRSHLSQVWAQTAAAYYGIKNVSCYSG GTEATALFPMAAETLKDSGFNIKTLSEGSNPVYSIKYSADELPVIGFSKTYDDDFNPESGFAAIMTCSQADGGCPFIAGA EKRIPITFEDPKISDGTPQQKETYLERSLQIGTEMFYVFSQIKK
Sequences:
>Translated_204_residues MLYPQIENTVKSFDFKQISEDRKTVLQPLIDFIQTKVDSKLETRLNLICTHNSRRSHLSQVWAQTAAAYYGIKNVSCYSG GTEATALFPMAAETLKDSGFNIKTLSEGSNPVYSIKYSADELPVIGFSKTYDDDFNPESGFAAIMTCSQADGGCPFIAGA EKRIPITFEDPKISDGTPQQKETYLERSLQIGTEMFYVFSQIKK >Mature_204_residues MLYPQIENTVKSFDFKQISEDRKTVLQPLIDFIQTKVDSKLETRLNLICTHNSRRSHLSQVWAQTAAAYYGIKNVSCYSG GTEATALFPMAAETLKDSGFNIKTLSEGSNPVYSIKYSADELPVIGFSKTYDDDFNPESGFAAIMTCSQADGGCPFIAGA EKRIPITFEDPKISDGTPQQKETYLERSLQIGTEMFYVFSQIKK
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22776; Mature: 22776
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPQIENTVKSFDFKQISEDRKTVLQPLIDFIQTKVDSKLETRLNLICTHNSRRSHLSQ CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEECCCHHHHHHH VWAQTAAAYYGIKNVSCYSGGTEATALFPMAAETLKDSGFNIKTLSEGSNPVYSIKYSAD HHHHHHHHHHCCCCCEECCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC ELPVIGFSKTYDDDFNPESGFAAIMTCSQADGGCPFIAGAEKRIPITFEDPKISDGTPQQ CCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCEEECCCCCCCCCCHH KETYLERSLQIGTEMFYVFSQIKK HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLYPQIENTVKSFDFKQISEDRKTVLQPLIDFIQTKVDSKLETRLNLICTHNSRRSHLSQ CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEECCCHHHHHHH VWAQTAAAYYGIKNVSCYSGGTEATALFPMAAETLKDSGFNIKTLSEGSNPVYSIKYSAD HHHHHHHHHHCCCCCEECCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCC ELPVIGFSKTYDDDFNPESGFAAIMTCSQADGGCPFIAGAEKRIPITFEDPKISDGTPQQ CCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCEEECCCCCCCCCCHH KETYLERSLQIGTEMFYVFSQIKK HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA