| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300820
Identifier: 146300820
GI number: 146300820
Start: 3644945
End: 3646189
Strand: Direct
Name: 146300820
Synonym: Fjoh_3075
Alternate gene names: NA
Gene position: 3644945-3646189 (Clockwise)
Preceding gene: 146300819
Following gene: 146300821
Centisome position: 59.78
GC content: 33.98
Gene sequence:
>1245_bases ATGACCAATCTAGGACAAATTATTCTGCAGTATAAAAACGATAACGAAAGTGTCTATAATACCTGGTTTATAGATAACAA CCAACGGTTAAAAGCATTTCGGACTATTAGACGCGGTGTTCTGCAAGTCATTGAGGATATTAAAAACAAGAACTTTCCTA ATGATTTTAAAGAAAGCAGCTTAGAATTTGTTTTGAGCTGCATAGCCGAACAAAAACAAGTCTTTGCAGGGGTTTCCCAT CCGTTTTATTGGAAACCCAAATTACGTATTCCTGACATCTATGAGAATCAAAACAATAAATTGGCTTTTGGTCAGTTCCT TGAAAATTGCATCAATGCTAAGTATGAAGAACAGGTTGTAAAAGAAATTATAAAACTAGATGAATTAAAAATTAAAGGAT TAGGGCCTGCTGTTGCCAGTATTTTATATTTCATACACCCAACCTGGTTCCCACCTTTTAACACCGCTATTCTCAATGGT TTTAATTTTCTTTTTAAAGACAAAAAAAAATTAGGAAGCTGGACTGAGTATCTTAAAATCCGAGAAACTTTATTGAAAAC TAATAGTCTACATAAATCACAGCTCTCAAATGATTTGGGTGCCATTGCAGGATTGTGTTTTGAAATTGGAACTCAGAAAA TGCTGATCGGCAATGATGAATATTTAAGCGAGGCAGAACGTTCAAGATTCGAAAAAAACGTACACAAGCGCCAAAAAGAA ATACTCGAAGAAAAACTGGAGGAAAATCTTCATAGTGAGATGCAGTACCATTTATTAAAAATTGGAGTTTCATTGGGTTT TGATGTCACCCCAGCGAGTAACGACAAAAGCAAATCGTTTGGAGGACAAAATTTTTCATTTATATCAATAAATAAATTTC CCGAACTCCCTACAGACAAGGACACACAAAATACTATCAAGCTTATTGATGTACTCTGGTTCGAAAAAGGCACAAACAAG ATTATAGGTGCCTTTGAAGTAGAAAAAAGCACTAGTATTTATTCCGGCATACTTCGCTTGTCTGACCTATATTTTAGTAT CTCAAGCGGACATGAAGTTTTTTACATTATTATTCCGGATAACCGGGAAAAAGATGTGGTTCTTCAGCTTAATAGGCCCG TTATAAAAAACTCAAATATGAATATCAAATATATCCTGTTTTCTGAATTAAGAGCTAATTGTGATGCTATCTGCAAATTT GGAACCGACCATTCAATAATGGAAAAAATATCAAAATCAATTTAA
Upstream 100 bases:
>100_bases GCCTTGGCAATGAGTTTTAGTTCGGTATCTGTTATTGTGAATGCATTGCGATTGAGAAGTTTAAAACTCTAAAGAATAAA TAATTTTACTATACAAACAA
Downstream 100 bases:
>100_bases AATTAACAAAATATGAAAAAAATAATTCTGCTAAGCTTCATTATTATACAATCGTTATCAATTTCTGCACAAGAAAAAGT TCAAATTAAACTTACTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTNLGQIILQYKNDNESVYNTWFIDNNQRLKAFRTIRRGVLQVIEDIKNKNFPNDFKESSLEFVLSCIAEQKQVFAGVSH PFYWKPKLRIPDIYENQNNKLAFGQFLENCINAKYEEQVVKEIIKLDELKIKGLGPAVASILYFIHPTWFPPFNTAILNG FNFLFKDKKKLGSWTEYLKIRETLLKTNSLHKSQLSNDLGAIAGLCFEIGTQKMLIGNDEYLSEAERSRFEKNVHKRQKE ILEEKLEENLHSEMQYHLLKIGVSLGFDVTPASNDKSKSFGGQNFSFISINKFPELPTDKDTQNTIKLIDVLWFEKGTNK IIGAFEVEKSTSIYSGILRLSDLYFSISSGHEVFYIIIPDNREKDVVLQLNRPVIKNSNMNIKYILFSELRANCDAICKF GTDHSIMEKISKSI
Sequences:
>Translated_414_residues MTNLGQIILQYKNDNESVYNTWFIDNNQRLKAFRTIRRGVLQVIEDIKNKNFPNDFKESSLEFVLSCIAEQKQVFAGVSH PFYWKPKLRIPDIYENQNNKLAFGQFLENCINAKYEEQVVKEIIKLDELKIKGLGPAVASILYFIHPTWFPPFNTAILNG FNFLFKDKKKLGSWTEYLKIRETLLKTNSLHKSQLSNDLGAIAGLCFEIGTQKMLIGNDEYLSEAERSRFEKNVHKRQKE ILEEKLEENLHSEMQYHLLKIGVSLGFDVTPASNDKSKSFGGQNFSFISINKFPELPTDKDTQNTIKLIDVLWFEKGTNK IIGAFEVEKSTSIYSGILRLSDLYFSISSGHEVFYIIIPDNREKDVVLQLNRPVIKNSNMNIKYILFSELRANCDAICKF GTDHSIMEKISKSI >Mature_413_residues TNLGQIILQYKNDNESVYNTWFIDNNQRLKAFRTIRRGVLQVIEDIKNKNFPNDFKESSLEFVLSCIAEQKQVFAGVSHP FYWKPKLRIPDIYENQNNKLAFGQFLENCINAKYEEQVVKEIIKLDELKIKGLGPAVASILYFIHPTWFPPFNTAILNGF NFLFKDKKKLGSWTEYLKIRETLLKTNSLHKSQLSNDLGAIAGLCFEIGTQKMLIGNDEYLSEAERSRFEKNVHKRQKEI LEEKLEENLHSEMQYHLLKIGVSLGFDVTPASNDKSKSFGGQNFSFISINKFPELPTDKDTQNTIKLIDVLWFEKGTNKI IGAFEVEKSTSIYSGILRLSDLYFSISSGHEVFYIIIPDNREKDVVLQLNRPVIKNSNMNIKYILFSELRANCDAICKFG TDHSIMEKISKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47787; Mature: 47656
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLGQIILQYKNDNESVYNTWFIDNNQRLKAFRTIRRGVLQVIEDIKNKNFPNDFKESS CCCHHEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LEFVLSCIAEQKQVFAGVSHPFYWKPKLRIPDIYENQNNKLAFGQFLENCINAKYEEQVV HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHCCCCCEEHHHHHHHHHHCCHHHHHHH KEIIKLDELKIKGLGPAVASILYFIHPTWFPPFNTAILNGFNFLFKDKKKLGSWTEYLKI HHHHHHHCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH RETLLKTNSLHKSQLSNDLGAIAGLCFEIGTQKMLIGNDEYLSEAERSRFEKNVHKRQKE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH ILEEKLEENLHSEMQYHLLKIGVSLGFDVTPASNDKSKSFGGQNFSFISINKFPELPTDK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DTQNTIKLIDVLWFEKGTNKIIGAFEVEKSTSIYSGILRLSDLYFSISSGHEVFYIIIPD CCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHEEECCCCEEEEEEECC NREKDVVLQLNRPVIKNSNMNIKYILFSELRANCDAICKFGTDHSIMEKISKSI CCCCCEEEEECCCEEECCCCCEEEEEHHHHHCCHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure TNLGQIILQYKNDNESVYNTWFIDNNQRLKAFRTIRRGVLQVIEDIKNKNFPNDFKESS CCHHEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LEFVLSCIAEQKQVFAGVSHPFYWKPKLRIPDIYENQNNKLAFGQFLENCINAKYEEQVV HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHCCCCCEEHHHHHHHHHHCCHHHHHHH KEIIKLDELKIKGLGPAVASILYFIHPTWFPPFNTAILNGFNFLFKDKKKLGSWTEYLKI HHHHHHHCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH RETLLKTNSLHKSQLSNDLGAIAGLCFEIGTQKMLIGNDEYLSEAERSRFEKNVHKRQKE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH ILEEKLEENLHSEMQYHLLKIGVSLGFDVTPASNDKSKSFGGQNFSFISINKFPELPTDK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DTQNTIKLIDVLWFEKGTNKIIGAFEVEKSTSIYSGILRLSDLYFSISSGHEVFYIIIPD CCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHEEECCCCEEEEEEECC NREKDVVLQLNRPVIKNSNMNIKYILFSELRANCDAICKFGTDHSIMEKISKSI CCCCCEEEEECCCEEECCCCCEEEEEHHHHHCCHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA