| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300812
Identifier: 146300812
GI number: 146300812
Start: 3632812
End: 3633504
Strand: Direct
Name: 146300812
Synonym: Fjoh_3066
Alternate gene names: NA
Gene position: 3632812-3633504 (Clockwise)
Preceding gene: 146300811
Following gene: 146300813
Centisome position: 59.58
GC content: 37.66
Gene sequence:
>693_bases ATGAAAAAACTAATTTTCTCAACCCTTGTAATGGCAATTGTACTTACAGCTTGTAATTCAAAAAACAAAGAAACTGCAGC TCCTGAAGCGGCTTCCGGGACAGCTCAGAATGACTCGCAATTGTATGCCTGTTCCATGCATCCTGAAATTACAGGAAAAA AAGGAGACAAATGTTCCAAATGCGGAATGGAATTAACCGAGCCAGTAAAGGAAACGGCCGGAAAAAGTGCAGAAGTAGAA ACAGCCCAGACTGCTCAAGGAACATTTTCTATAAACGAAATCGTGAGTAATTATCTGTCCCTAAAAAATGCATTAACCAA AGATGATACAAAAGGAGCTGCAGATGCAGGCAAGGCATTATATGCAGTTTTTAACAGTGTAAATCCCAATTCGATAGATG CGAAATTAAAAGCAGAATATCTTGATATTGCTGATGATGCCAAAGAACACGCAGAACATATTGGAGCTAACGGCGGAAAT ATTGAACACCAGAGAGAGCATTTTGCCGTGTTAAGTAAAGACATGAATGATTTGATAAAATCTTTCAAATCAGAACAAAA ATTGTATCAGGACTTTTGTCCTATGTATGATGGCGGAAAAGGAGCTATTTGGATAAGCGAAACCAAGGAGATCAAAAACC CATATCAAGGAAAAAAAATGTTAACCTGTGGTTCTATGAAAAAAGAACTATAG
Upstream 100 bases:
>100_bases AGAGATTGGATTTGCAATCAAAAAAAGAATAATTCTTATAACACTCAAACAAAGGAATGTTAGACAAAAAAACATTCATT AGAGATAAAAACTAAAAAAA
Downstream 100 bases:
>100_bases TACAGCTAAGTACTAATAAATTTATCGGGCTGTTTACATAATGACCACTCAATTTTCTCGTGACTAATGATGTTCATAAT TTATTGAAATGTATCTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKKLIFSTLVMAIVLTACNSKNKETAAPEAASGTAQNDSQLYACSMHPEITGKKGDKCSKCGMELTEPVKETAGKSAEVE TAQTAQGTFSINEIVSNYLSLKNALTKDDTKGAADAGKALYAVFNSVNPNSIDAKLKAEYLDIADDAKEHAEHIGANGGN IEHQREHFAVLSKDMNDLIKSFKSEQKLYQDFCPMYDGGKGAIWISETKEIKNPYQGKKMLTCGSMKKEL
Sequences:
>Translated_230_residues MKKLIFSTLVMAIVLTACNSKNKETAAPEAASGTAQNDSQLYACSMHPEITGKKGDKCSKCGMELTEPVKETAGKSAEVE TAQTAQGTFSINEIVSNYLSLKNALTKDDTKGAADAGKALYAVFNSVNPNSIDAKLKAEYLDIADDAKEHAEHIGANGGN IEHQREHFAVLSKDMNDLIKSFKSEQKLYQDFCPMYDGGKGAIWISETKEIKNPYQGKKMLTCGSMKKEL >Mature_230_residues MKKLIFSTLVMAIVLTACNSKNKETAAPEAASGTAQNDSQLYACSMHPEITGKKGDKCSKCGMELTEPVKETAGKSAEVE TAQTAQGTFSINEIVSNYLSLKNALTKDDTKGAADAGKALYAVFNSVNPNSIDAKLKAEYLDIADDAKEHAEHIGANGGN IEHQREHFAVLSKDMNDLIKSFKSEQKLYQDFCPMYDGGKGAIWISETKEIKNPYQGKKMLTCGSMKKEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24972; Mature: 24972
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIFSTLVMAIVLTACNSKNKETAAPEAASGTAQNDSQLYACSMHPEITGKKGDKCSK CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHH CGMELTEPVKETAGKSAEVETAQTAQGTFSINEIVSNYLSLKNALTKDDTKGAADAGKAL CCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YAVFNSVNPNSIDAKLKAEYLDIADDAKEHAEHIGANGGNIEHQREHFAVLSKDMNDLIK HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SFKSEQKLYQDFCPMYDGGKGAIWISETKEIKNPYQGKKMLTCGSMKKEL HHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCCCEEEECCCHHHCC >Mature Secondary Structure MKKLIFSTLVMAIVLTACNSKNKETAAPEAASGTAQNDSQLYACSMHPEITGKKGDKCSK CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHH CGMELTEPVKETAGKSAEVETAQTAQGTFSINEIVSNYLSLKNALTKDDTKGAADAGKAL CCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YAVFNSVNPNSIDAKLKAEYLDIADDAKEHAEHIGANGGNIEHQREHFAVLSKDMNDLIK HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SFKSEQKLYQDFCPMYDGGKGAIWISETKEIKNPYQGKKMLTCGSMKKEL HHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCCCEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA