Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300804
Identifier: 146300804
GI number: 146300804
Start: 3623365
End: 3625737
Strand: Reverse
Name: 146300804
Synonym: Fjoh_3058
Alternate gene names: NA
Gene position: 3625737-3623365 (Counterclockwise)
Preceding gene: 146300805
Following gene: 146300803
Centisome position: 59.47
GC content: 35.61
Gene sequence:
>2373_bases ATGGCAACCGAAAGAAATTTACCAATTAAGTTTTTCCAGAAAAGAGAAAAAGATGAATCCGGAACTGAAGGTGCCGGAGG AGGTCCTATGCCTAAATGGGTAAATAAGGACAACATCGCTGGAAAATCTATAATTTTTAGAGAGAAATTGATTGAGGTTG ACCAGCTTTTGAAACGAAAAGTAAGTTCGGATAATTATACTCCAACTGTTTTAAGACTTAAAGTCAACGAAGACGCACTT GCCAAGAGATTTCGTAAAGAAATAGCTTTGATCTTCAATGTGGATAAAAAACTTAATTTAATAGGTTTCAATTCAGAAAG TGAATTACTGGTTAAAGTGGACAATGCACGTGATGTTAAGAAGATGATCGATAATTTTGCAAAAGCAGATCAGAATTTTA TTTCAGATTCAATTATAATGGGTATCGATGCTATTGAGAATATTGAAGTTTATCATCCATTAATTAATGTTAATCCAAAT ACCGAATCTAAGATAAAAGTTAAGCTGTTTAATTATGGAGACAGTGAATTAAATAGAATTCTTATCCAGAACTTTGAATC TTTCTGCCAAAACAATGATATTGATGCAGAACAAACTGTTTATTCTGCAGACCTCAACATATATAGTATCGCTTCTATTA CTGAAGATGCTCTTGATTTGCTGCAGGATTTCGATGGAATACAAATGATAACAGAAATGCCTACTTATGACATTACTTTT GATGAAATGATCGGTGAAGACGAAATTCCCATAAAATATCCAAAAGCTGGAAAAGAATATCCGATAGTAGGGATACTGGA TTCGGGTGTGGCAAACATTCCGCATTTCGAGCCATGGTTGGAGAATGACCGCAGCACTTATTTTATTGATGATGTTATTA ATAAGGGGCATGGAACTTTTGTTGCAGGCGTACTGTTGTATGGAGATGATTTCCAGGGTAATAAATATACCGGTCTTGAA GGGTGCAAAATTTATGAGGCTATCGTTATTGCAGATAAAAACAAACAGGCTATTTCTGAAGATGAGCTCATTGAAAACAT CAGGGATGCGGTAAGCAGAAATAATCATATAAAAATTTGGAATCTCTCACTTGGTACTGCTACAGAAGCAGATTTATATG AGTTTTCAGATTTTGGAAAAGCATTGGATGAAATTCAGGATCACAACGATGTGCTGATTTGCAAATCGGCAGGAAATTGT GAAAATTTTAAATTCAAAGCACCAAAATCAAGAATCGCTAATTCAGCTGATACGGTTAGAGGGCTGGTAGTGGGATCGAT TTCACATGATCAGAATGCAACGGATCAGGTAGGAAAGCATAATCCTTCGCCTTTTTCCAGAAAAGGTCCCGGGCCTTCCT ATACGATAAAGCCTGATCTTACTCATATTGGAGGAAATGCAGGTTTGAATTCTAGAAATACTGCAATTTACAATACTGTT AAGTCATTTTCGACCTCTGGAGGGGTAGCTCATAATGTCGGTACAAGTTTTTCGACACCGCGTATTACAGCTATTGCTGC GGGTTTAAATTTTAAGCTAAACGAAATGTTTAGCCCAACGCTGCTTAAGGGCTTAATCATACATTCTGCGAAATATCCAG ATGAGATGAAGATGGAGCTTGCGGAAAAATTAAATCATGCCGGATTTGGTCTGCCTACCAATATTGATGATATCTTGTAT AATGAACCAAATGAGATTACATTAATTCTGCAGGATAACTTAGAAAAGGGAAGCTTTATTGATATTTTGGATTTTCCATT TCCTCAGAGTATGATTGATGAGGATGGATATTATTATGGAGAAGTTACAGTTACGCTGGTAACTTCTCCAATTCTCGAAG TTTCACAAGGAGTAGAATACTGCCAAAGTAATATAGATGTTATGTTTGGCAGTTATGATACTAAAGTAGCCAGGGACATT ACCCAGAAAACGATTAAAAACCCAATTGGAGCAGATAATCGACAAAATCTTTTGGCGCCTAATCTTTATTCACGAAAAAC GCATAAATCTGTAACGGATAAATTTTCAACAGAGCGTATGCTTATTTCTTACGGAAATAAATTTCAGCCGGTCAAAAAGT GGTGCGTTAATTTTGATGATTTCACTCCTGCCAATAAAGAGCATTATTTAAAAGGCCCTAAAAACTGGTATTTAAAACTC GAAGGTTTGTTCAGACATTATACCGAGGCGAAGGCAGAAGCTCAGAATTTTACACCTAGTCAGGAATTTTGCTGCATAAT AACAATAAAAGACACAAAGAAGCGCGGTAATATTTATAATGAAGTTACTCAGCTATTGAATAGTTTTAGCTTTATCCATG GCAATGTTAAAATTAGACAAGAAGTTGAAGTGAGAGTTGATAATAAAAATTAA
Upstream 100 bases:
>100_bases GAATTTTTAAATGATAATGGTATTTCACAAACAGCAATTGCAGATAAAATGAATGTTTCATTAAGACAGGTAAGAAATTA TCTAAATAAATAATTAAGAT
Downstream 100 bases:
>100_bases TAAAATGAGATAATTGATAAACATAAAAAAACCCAATCAGAACTTGGCGGTGCGGATTGGGTTAGGGAATAAGTTTGTTC GACTTCTATATAGAGGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 790; Mature: 789
Protein sequence:
>790_residues MATERNLPIKFFQKREKDESGTEGAGGGPMPKWVNKDNIAGKSIIFREKLIEVDQLLKRKVSSDNYTPTVLRLKVNEDAL AKRFRKEIALIFNVDKKLNLIGFNSESELLVKVDNARDVKKMIDNFAKADQNFISDSIIMGIDAIENIEVYHPLINVNPN TESKIKVKLFNYGDSELNRILIQNFESFCQNNDIDAEQTVYSADLNIYSIASITEDALDLLQDFDGIQMITEMPTYDITF DEMIGEDEIPIKYPKAGKEYPIVGILDSGVANIPHFEPWLENDRSTYFIDDVINKGHGTFVAGVLLYGDDFQGNKYTGLE GCKIYEAIVIADKNKQAISEDELIENIRDAVSRNNHIKIWNLSLGTATEADLYEFSDFGKALDEIQDHNDVLICKSAGNC ENFKFKAPKSRIANSADTVRGLVVGSISHDQNATDQVGKHNPSPFSRKGPGPSYTIKPDLTHIGGNAGLNSRNTAIYNTV KSFSTSGGVAHNVGTSFSTPRITAIAAGLNFKLNEMFSPTLLKGLIIHSAKYPDEMKMELAEKLNHAGFGLPTNIDDILY NEPNEITLILQDNLEKGSFIDILDFPFPQSMIDEDGYYYGEVTVTLVTSPILEVSQGVEYCQSNIDVMFGSYDTKVARDI TQKTIKNPIGADNRQNLLAPNLYSRKTHKSVTDKFSTERMLISYGNKFQPVKKWCVNFDDFTPANKEHYLKGPKNWYLKL EGLFRHYTEAKAEAQNFTPSQEFCCIITIKDTKKRGNIYNEVTQLLNSFSFIHGNVKIRQEVEVRVDNKN
Sequences:
>Translated_790_residues MATERNLPIKFFQKREKDESGTEGAGGGPMPKWVNKDNIAGKSIIFREKLIEVDQLLKRKVSSDNYTPTVLRLKVNEDAL AKRFRKEIALIFNVDKKLNLIGFNSESELLVKVDNARDVKKMIDNFAKADQNFISDSIIMGIDAIENIEVYHPLINVNPN TESKIKVKLFNYGDSELNRILIQNFESFCQNNDIDAEQTVYSADLNIYSIASITEDALDLLQDFDGIQMITEMPTYDITF DEMIGEDEIPIKYPKAGKEYPIVGILDSGVANIPHFEPWLENDRSTYFIDDVINKGHGTFVAGVLLYGDDFQGNKYTGLE GCKIYEAIVIADKNKQAISEDELIENIRDAVSRNNHIKIWNLSLGTATEADLYEFSDFGKALDEIQDHNDVLICKSAGNC ENFKFKAPKSRIANSADTVRGLVVGSISHDQNATDQVGKHNPSPFSRKGPGPSYTIKPDLTHIGGNAGLNSRNTAIYNTV KSFSTSGGVAHNVGTSFSTPRITAIAAGLNFKLNEMFSPTLLKGLIIHSAKYPDEMKMELAEKLNHAGFGLPTNIDDILY NEPNEITLILQDNLEKGSFIDILDFPFPQSMIDEDGYYYGEVTVTLVTSPILEVSQGVEYCQSNIDVMFGSYDTKVARDI TQKTIKNPIGADNRQNLLAPNLYSRKTHKSVTDKFSTERMLISYGNKFQPVKKWCVNFDDFTPANKEHYLKGPKNWYLKL EGLFRHYTEAKAEAQNFTPSQEFCCIITIKDTKKRGNIYNEVTQLLNSFSFIHGNVKIRQEVEVRVDNKN >Mature_789_residues ATERNLPIKFFQKREKDESGTEGAGGGPMPKWVNKDNIAGKSIIFREKLIEVDQLLKRKVSSDNYTPTVLRLKVNEDALA KRFRKEIALIFNVDKKLNLIGFNSESELLVKVDNARDVKKMIDNFAKADQNFISDSIIMGIDAIENIEVYHPLINVNPNT ESKIKVKLFNYGDSELNRILIQNFESFCQNNDIDAEQTVYSADLNIYSIASITEDALDLLQDFDGIQMITEMPTYDITFD EMIGEDEIPIKYPKAGKEYPIVGILDSGVANIPHFEPWLENDRSTYFIDDVINKGHGTFVAGVLLYGDDFQGNKYTGLEG CKIYEAIVIADKNKQAISEDELIENIRDAVSRNNHIKIWNLSLGTATEADLYEFSDFGKALDEIQDHNDVLICKSAGNCE NFKFKAPKSRIANSADTVRGLVVGSISHDQNATDQVGKHNPSPFSRKGPGPSYTIKPDLTHIGGNAGLNSRNTAIYNTVK SFSTSGGVAHNVGTSFSTPRITAIAAGLNFKLNEMFSPTLLKGLIIHSAKYPDEMKMELAEKLNHAGFGLPTNIDDILYN EPNEITLILQDNLEKGSFIDILDFPFPQSMIDEDGYYYGEVTVTLVTSPILEVSQGVEYCQSNIDVMFGSYDTKVARDIT QKTIKNPIGADNRQNLLAPNLYSRKTHKSVTDKFSTERMLISYGNKFQPVKKWCVNFDDFTPANKEHYLKGPKNWYLKLE GLFRHYTEAKAEAQNFTPSQEFCCIITIKDTKKRGNIYNEVTQLLNSFSFIHGNVKIRQEVEVRVDNKN
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88857; Mature: 88726
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATERNLPIKFFQKREKDESGTEGAGGGPMPKWVNKDNIAGKSIIFREKLIEVDQLLKRK CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VSSDNYTPTVLRLKVNEDALAKRFRKEIALIFNVDKKLNLIGFNSESELLVKVDNARDVK HCCCCCCCEEEEEEECHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEEECCCHHHH KMIDNFAKADQNFISDSIIMGIDAIENIEVYHPLINVNPNTESKIKVKLFNYGDSELNRI HHHHHHHHHHHHHHCCHHEEECHHHCCEEEECCEEECCCCCCCEEEEEEEECCHHHHHHH LIQNFESFCQNNDIDAEQTVYSADLNIYSIASITEDALDLLQDFDGIQMITEMPTYDITF HHHHHHHHHCCCCCCHHHEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCH DEMIGEDEIPIKYPKAGKEYPIVGILDSGVANIPHFEPWLENDRSTYFIDDVINKGHGTF HHHCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCEEEEHHHHCCCCCCE VAGVLLYGDDFQGNKYTGLEGCKIYEAIVIADKNKQAISEDELIENIRDAVSRNNHIKIW EEEEEEECCCCCCCEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEE NLSLGTATEADLYEFSDFGKALDEIQDHNDVLICKSAGNCENFKFKAPKSRIANSADTVR EEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHCCCHHHHE GLVVGSISHDQNATDQVGKHNPSPFSRKGPGPSYTIKPDLTHIGGNAGLNSRNTAIYNTV EEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHCCCCCCCCCCCCCHHHHHH KSFSTSGGVAHNVGTSFSTPRITAIAAGLNFKLNEMFSPTLLKGLIIHSAKYPDEMKMEL HHHCCCCCEEECCCCCCCCCCEEEEEECCCEEHHHHCCHHHHHHHHHHCCCCCHHHHHHH AEKLNHAGFGLPTNIDDILYNEPNEITLILQDNLEKGSFIDILDFPFPQSMIDEDGYYYG HHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHCCCCEEEE EVTVTLVTSPILEVSQGVEYCQSNIDVMFGSYDTKVARDITQKTIKNPIGADNRQNLLAP EEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC NLYSRKTHKSVTDKFSTERMLISYGNKFQPVKKWCVNFDDFTPANKEHYLKGPKNWYLKL CHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEE EGLFRHYTEAKAEAQNFTPSQEFCCIITIKDTKKRGNIYNEVTQLLNSFSFIHGNVKIRQ HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHEEECCEEEEE EVEVRVDNKN EEEEEECCCC >Mature Secondary Structure ATERNLPIKFFQKREKDESGTEGAGGGPMPKWVNKDNIAGKSIIFREKLIEVDQLLKRK CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VSSDNYTPTVLRLKVNEDALAKRFRKEIALIFNVDKKLNLIGFNSESELLVKVDNARDVK HCCCCCCCEEEEEEECHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEEECCCHHHH KMIDNFAKADQNFISDSIIMGIDAIENIEVYHPLINVNPNTESKIKVKLFNYGDSELNRI HHHHHHHHHHHHHHCCHHEEECHHHCCEEEECCEEECCCCCCCEEEEEEEECCHHHHHHH LIQNFESFCQNNDIDAEQTVYSADLNIYSIASITEDALDLLQDFDGIQMITEMPTYDITF HHHHHHHHHCCCCCCHHHEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCH DEMIGEDEIPIKYPKAGKEYPIVGILDSGVANIPHFEPWLENDRSTYFIDDVINKGHGTF HHHCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCEEEEHHHHCCCCCCE VAGVLLYGDDFQGNKYTGLEGCKIYEAIVIADKNKQAISEDELIENIRDAVSRNNHIKIW EEEEEEECCCCCCCEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEE NLSLGTATEADLYEFSDFGKALDEIQDHNDVLICKSAGNCENFKFKAPKSRIANSADTVR EEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHCCCHHHHE GLVVGSISHDQNATDQVGKHNPSPFSRKGPGPSYTIKPDLTHIGGNAGLNSRNTAIYNTV EEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHCCCCCCCCCCCCCHHHHHH KSFSTSGGVAHNVGTSFSTPRITAIAAGLNFKLNEMFSPTLLKGLIIHSAKYPDEMKMEL HHHCCCCCEEECCCCCCCCCCEEEEEECCCEEHHHHCCHHHHHHHHHHCCCCCHHHHHHH AEKLNHAGFGLPTNIDDILYNEPNEITLILQDNLEKGSFIDILDFPFPQSMIDEDGYYYG HHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHCCCCEEEE EVTVTLVTSPILEVSQGVEYCQSNIDVMFGSYDTKVARDITQKTIKNPIGADNRQNLLAP EEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC NLYSRKTHKSVTDKFSTERMLISYGNKFQPVKKWCVNFDDFTPANKEHYLKGPKNWYLKL CHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEE EGLFRHYTEAKAEAQNFTPSQEFCCIITIKDTKKRGNIYNEVTQLLNSFSFIHGNVKIRQ HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHEEECCEEEEE EVEVRVDNKN EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA