Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300802
Identifier: 146300802
GI number: 146300802
Start: 3621241
End: 3622419
Strand: Reverse
Name: 146300802
Synonym: Fjoh_3056
Alternate gene names: NA
Gene position: 3622419-3621241 (Counterclockwise)
Preceding gene: 146300803
Following gene: 146300801
Centisome position: 59.41
GC content: 37.4
Gene sequence:
>1179_bases ATGTCACAGCAACTGATAAGTCATAGTGTAGATCTGAAGCGTCTTAGAGACGAAGGATATGAAATTGAAGTAAATGGTGG ATTTTTATTAGTCCACCATATACCTTATTTGAATGATAAGAGGGAACATCTTTTAGGAATATTGGTAAGTACATTGACCT TAAAGAACAATGAGACTACTGGCGTGCCTGATAATCATGTGATTTACTTCATTGGTGAGAACCCATGTAATGAAGACGGC TCCCTAATAACGGCTATTCAGCACAGTAACGTTGATGCAACGCTCCGTGATGGAATAACGGTGAATCGTTCTTTTTCTAA TAAGCCTGCCGCAGGTTATCCTAATTACTATGAGAAGGTAAAACGTTATGCGGATATTATTTCGGCGCCAGCTAAATTTT TAAACCCCTCGCTTACCGAGAAGACATTTAAAGTTATAACTGATCATGATAATCAGGGTGTATTTCATTATTTGGATACT AATTCAAGCAGAGCAAATATAGATATGCTTAATAATACATTCTCTAACCAAAAGATAGCCATTATTGGTTTAGGCGGTAC CGGAGCGTATATTTTAGATTTGGTAGCCAAAACACCAGTAGCCGAAGTGCATATCTATGATGGTGACAGTTTTGATCAGC ATAATGCTTTCCGCTCGCCTGGTGCAAGCTCCATTGAAGATCTTCGTGCAAATTTGAAGAAGGCAGAGTTTTATGGTACA ACCTATTCTAAAATGCACAGGAGAATAATTTCTCACCCTTACTATGTAAGGAAAGATATTTATAGCGAACTTGATAATAT GTCTTATGTATTTATTTGTGTTGACAAAAACAGTGTCAGAAAATCTATATCTGATTATCTTGCAAGTAAAGGCATATCAT TCATTGATGTAGGACTAGGGGTAAATGTGGTGGGTAATAAACTTATGGGAGCAGTTCGCGTAACATCCGCAACAGCAGAA AAAAGTGATCATTTGCCCGATAGGATATTTAGCGAGGACAATGATAATAATGATTATGTCACCAATATACAAATCGCGGA TTTGAACTGTCTTAACGCTGCATTAGCGGTAATAAAATGGAAGAAGCTCAGTGGTTTTTACGTCGATCTGGAGGGGGAGC ATCACAGTTCCTATTCAATTGGTGTTTCTAAAATTTTCAATGAAGATGCTACAGTATAG
Upstream 100 bases:
>100_bases AAGGGATACACGGTTACTTACAGTAGAGGTCATGATCCTAAACCAGAGGGAACGATGGTTAAGAATTCGGTGGTTAGGGT TAAACATAAAATGATTTTCG
Downstream 100 bases:
>100_bases ATTCGTTGAATTTATACCGGAAATATTGGAAGACGGAGTCTTGTATGTTTCCATGGAATATTGTACAGCCATACACAAAT GCGTGTGTGGCTGCGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSQQLISHSVDLKRLRDEGYEIEVNGGFLLVHHIPYLNDKREHLLGILVSTLTLKNNETTGVPDNHVIYFIGENPCNEDG SLITAIQHSNVDATLRDGITVNRSFSNKPAAGYPNYYEKVKRYADIISAPAKFLNPSLTEKTFKVITDHDNQGVFHYLDT NSSRANIDMLNNTFSNQKIAIIGLGGTGAYILDLVAKTPVAEVHIYDGDSFDQHNAFRSPGASSIEDLRANLKKAEFYGT TYSKMHRRIISHPYYVRKDIYSELDNMSYVFICVDKNSVRKSISDYLASKGISFIDVGLGVNVVGNKLMGAVRVTSATAE KSDHLPDRIFSEDNDNNDYVTNIQIADLNCLNAALAVIKWKKLSGFYVDLEGEHHSSYSIGVSKIFNEDATV
Sequences:
>Translated_392_residues MSQQLISHSVDLKRLRDEGYEIEVNGGFLLVHHIPYLNDKREHLLGILVSTLTLKNNETTGVPDNHVIYFIGENPCNEDG SLITAIQHSNVDATLRDGITVNRSFSNKPAAGYPNYYEKVKRYADIISAPAKFLNPSLTEKTFKVITDHDNQGVFHYLDT NSSRANIDMLNNTFSNQKIAIIGLGGTGAYILDLVAKTPVAEVHIYDGDSFDQHNAFRSPGASSIEDLRANLKKAEFYGT TYSKMHRRIISHPYYVRKDIYSELDNMSYVFICVDKNSVRKSISDYLASKGISFIDVGLGVNVVGNKLMGAVRVTSATAE KSDHLPDRIFSEDNDNNDYVTNIQIADLNCLNAALAVIKWKKLSGFYVDLEGEHHSSYSIGVSKIFNEDATV >Mature_391_residues SQQLISHSVDLKRLRDEGYEIEVNGGFLLVHHIPYLNDKREHLLGILVSTLTLKNNETTGVPDNHVIYFIGENPCNEDGS LITAIQHSNVDATLRDGITVNRSFSNKPAAGYPNYYEKVKRYADIISAPAKFLNPSLTEKTFKVITDHDNQGVFHYLDTN SSRANIDMLNNTFSNQKIAIIGLGGTGAYILDLVAKTPVAEVHIYDGDSFDQHNAFRSPGASSIEDLRANLKKAEFYGTT YSKMHRRIISHPYYVRKDIYSELDNMSYVFICVDKNSVRKSISDYLASKGISFIDVGLGVNVVGNKLMGAVRVTSATAEK SDHLPDRIFSEDNDNNDYVTNIQIADLNCLNAALAVIKWKKLSGFYVDLEGEHHSSYSIGVSKIFNEDATV
Specific function: Unknown
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43700; Mature: 43568
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQLISHSVDLKRLRDEGYEIEVNGGFLLVHHIPYLNDKREHLLGILVSTLTLKNNETT CCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCC GVPDNHVIYFIGENPCNEDGSLITAIQHSNVDATLRDGITVNRSFSNKPAAGYPNYYEKV CCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEECCCEEEECCCCCCCCCCCCHHHHHH KRYADIISAPAKFLNPSLTEKTFKVITDHDNQGVFHYLDTNSSRANIDMLNNTFSNQKIA HHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCEEE IIGLGGTGAYILDLVAKTPVAEVHIYDGDSFDQHNAFRSPGASSIEDLRANLKKAEFYGT EEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC TYSKMHRRIISHPYYVRKDIYSELDNMSYVFICVDKNSVRKSISDYLASKGISFIDVGLG HHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCC VNVVGNKLMGAVRVTSATAEKSDHLPDRIFSEDNDNNDYVTNIQIADLNCLNAALAVIKW CCHHHHHHHCEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHEE KKLSGFYVDLEGEHHSSYSIGVSKIFNEDATV EECCCEEEEEECCCCCCEEECHHHHCCCCCCC >Mature Secondary Structure SQQLISHSVDLKRLRDEGYEIEVNGGFLLVHHIPYLNDKREHLLGILVSTLTLKNNETT CCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCC GVPDNHVIYFIGENPCNEDGSLITAIQHSNVDATLRDGITVNRSFSNKPAAGYPNYYEKV CCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEECCCEEEECCCCCCCCCCCCHHHHHH KRYADIISAPAKFLNPSLTEKTFKVITDHDNQGVFHYLDTNSSRANIDMLNNTFSNQKIA HHHHHHHHCCHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCEEE IIGLGGTGAYILDLVAKTPVAEVHIYDGDSFDQHNAFRSPGASSIEDLRANLKKAEFYGT EEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC TYSKMHRRIISHPYYVRKDIYSELDNMSYVFICVDKNSVRKSISDYLASKGISFIDVGLG HHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCC VNVVGNKLMGAVRVTSATAEKSDHLPDRIFSEDNDNNDYVTNIQIADLNCLNAALAVIKW CCHHHHHHHCEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHEE KKLSGFYVDLEGEHHSSYSIGVSKIFNEDATV EECCCEEEEEECCCCCCEEECHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA