| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300773
Identifier: 146300773
GI number: 146300773
Start: 3578109
End: 3579026
Strand: Reverse
Name: 146300773
Synonym: Fjoh_3024
Alternate gene names: NA
Gene position: 3579026-3578109 (Counterclockwise)
Preceding gene: 146300774
Following gene: 146300772
Centisome position: 58.7
GC content: 44.23
Gene sequence:
>918_bases ATGACAAAGGCAGGCAGTGCACCTTTTGCGGCGCCCGGAATTTTTGTAAAAGATGTTACATTAAATCCTTCGAGTATGAA TTCACTGCATTCCATTATTTCCCAAATCACTATTAAAGAAGACAAGTTATCCTGCCAGACCGCCCATCTCATTGATGAAG CCCATCAGATGACACTCTATCTGAGGGAGGTGCTCCAGACGGTCCGCCAGCATGTGCTGGAAAAGGGATTCGAGGATGAG GCTGAGGAGATCGATTTTTTCAGGAATATCAAGCCCCTGATTCTAGGGAAATTGATCTTCTACAATAAAGTTTTCCGCAT AGAGACCATCTGTCCGGTAAGGGAAGGGCAGGTCCATCAGAAATTTTTCATGAGCCATCTCCAACAGCTCAAAGCCCAGT TCAAAGAATGCATCTTCAGCACAAACTTTTACCGTTATTACAAATCAGGGAGAAATGACCGGGATGATGAATACTTTTTA CGGGGAAAGATCAATTACAGCGATGGGCTGAACAGCTATGTTTTCGAGATAGACCACAGGTTTTCGACCTATTATGACAA TAAGATTGCAAGAATAATCGCCAATGAGCTGATCTATAATTATCTTACAACGAAGATAAATCCAGAAGAATCTTCGCATT CTTTCCCCGCAGGGACGGAATCCTCCAAAGAAATTTTCTGGACGGATTCCAAAAACGCGCTTATCGAACTTATCTATGCA CTTTACGCATCAGGAGTGGTTTCGCACGGTAAGATCGGCATACGCAGGATAAGCCTTGTTTTTCAGCTGCTTTTCCGTAT TCCTCTGGGAGACGTTCATCATTCCTTCCACAGGATGAAGGACAGGGCCGGAACGAGGACTTCCTTTTTGGACCACCTCA AGACGTCCTTGGAGCAGTATATGGACAAAGAGCTTTAG
Upstream 100 bases:
>100_bases CAGCACCTATTCGATTATGCTAATAAATTCAACTAACCGTATTATCTTTTACCAGCAGGTTTGCTTTTGAGAACGGCGTA ATGACTGTTTCTGCTGCCAA
Downstream 100 bases:
>100_bases TGGACTGGAGATAAACGGTCCAAAAGCATTTCTTTTTTACCCATAATGGCCAATTGGCACGGATTGCCGGCCCAATTTTT TGAAAGCCCCATTTGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTKAGSAPFAAPGIFVKDVTLNPSSMNSLHSIISQITIKEDKLSCQTAHLIDEAHQMTLYLREVLQTVRQHVLEKGFEDE AEEIDFFRNIKPLILGKLIFYNKVFRIETICPVREGQVHQKFFMSHLQQLKAQFKECIFSTNFYRYYKSGRNDRDDEYFL RGKINYSDGLNSYVFEIDHRFSTYYDNKIARIIANELIYNYLTTKINPEESSHSFPAGTESSKEIFWTDSKNALIELIYA LYASGVVSHGKIGIRRISLVFQLLFRIPLGDVHHSFHRMKDRAGTRTSFLDHLKTSLEQYMDKEL
Sequences:
>Translated_305_residues MTKAGSAPFAAPGIFVKDVTLNPSSMNSLHSIISQITIKEDKLSCQTAHLIDEAHQMTLYLREVLQTVRQHVLEKGFEDE AEEIDFFRNIKPLILGKLIFYNKVFRIETICPVREGQVHQKFFMSHLQQLKAQFKECIFSTNFYRYYKSGRNDRDDEYFL RGKINYSDGLNSYVFEIDHRFSTYYDNKIARIIANELIYNYLTTKINPEESSHSFPAGTESSKEIFWTDSKNALIELIYA LYASGVVSHGKIGIRRISLVFQLLFRIPLGDVHHSFHRMKDRAGTRTSFLDHLKTSLEQYMDKEL >Mature_304_residues TKAGSAPFAAPGIFVKDVTLNPSSMNSLHSIISQITIKEDKLSCQTAHLIDEAHQMTLYLREVLQTVRQHVLEKGFEDEA EEIDFFRNIKPLILGKLIFYNKVFRIETICPVREGQVHQKFFMSHLQQLKAQFKECIFSTNFYRYYKSGRNDRDDEYFLR GKINYSDGLNSYVFEIDHRFSTYYDNKIARIIANELIYNYLTTKINPEESSHSFPAGTESSKEIFWTDSKNALIELIYAL YASGVVSHGKIGIRRISLVFQLLFRIPLGDVHHSFHRMKDRAGTRTSFLDHLKTSLEQYMDKEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35492; Mature: 35361
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAGSAPFAAPGIFVKDVTLNPSSMNSLHSIISQITIKEDKLSCQTAHLIDEAHQMTLY CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LREVLQTVRQHVLEKGFEDEAEEIDFFRNIKPLILGKLIFYNKVFRIETICPVREGQVHQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHH KFFMSHLQQLKAQFKECIFSTNFYRYYKSGRNDRDDEYFLRGKINYSDGLNSYVFEIDHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH FSTYYDNKIARIIANELIYNYLTTKINPEESSHSFPAGTESSKEIFWTDSKNALIELIYA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH LYASGVVSHGKIGIRRISLVFQLLFRIPLGDVHHSFHRMKDRAGTRTSFLDHLKTSLEQY HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MDKEL HHCCC >Mature Secondary Structure TKAGSAPFAAPGIFVKDVTLNPSSMNSLHSIISQITIKEDKLSCQTAHLIDEAHQMTLY CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LREVLQTVRQHVLEKGFEDEAEEIDFFRNIKPLILGKLIFYNKVFRIETICPVREGQVHQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHH KFFMSHLQQLKAQFKECIFSTNFYRYYKSGRNDRDDEYFLRGKINYSDGLNSYVFEIDHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH FSTYYDNKIARIIANELIYNYLTTKINPEESSHSFPAGTESSKEIFWTDSKNALIELIYA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH LYASGVVSHGKIGIRRISLVFQLLFRIPLGDVHHSFHRMKDRAGTRTSFLDHLKTSLEQY HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MDKEL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA