Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300771

Identifier: 146300771

GI number: 146300771

Start: 3576035

End: 3577489

Strand: Reverse

Name: 146300771

Synonym: Fjoh_3022

Alternate gene names: NA

Gene position: 3577489-3576035 (Counterclockwise)

Preceding gene: 146300772

Following gene: 146300770

Centisome position: 58.68

GC content: 47.84

Gene sequence:

>1455_bases
ATGAGTAAACAATCCGCTGAAAAAGCGAAATGGCCGGAGGAACTCTCGGACATCCTGCTTGTGTTTGATAAAGAAAAAAA
GAAAATCCAGGCAGTGAAAAGTATTGATGAGAATGGAAAAATGCAGACGGTGGATCCGACAGATAAAAACCGGAACCAAT
TTATGAGAGTGGACAGGAATGGCGATTTCTTCTCCAATTTTTTTTCCAATTTTCTGAGCCAGCTGAAAAATCCCACCAGC
TTTTCATTTTTCAAGGTGCCTTTTGCCATTGGTGTTAATACGGCAAAGGAAATGCAGCTGCACGCAGACAATCCGACGCC
GCAGGGCGAACTGCTCATGCAGCAGCACGAAATTAAAGCGAGTGAACCTGAACAGGACAAAAAAGAGAATAATCCAATAA
ATAAAAATCATATGGAAGCAACACAGACAAATGCCGAGACGAGCGAATACCGCTACAAGCCGGAACAGATCGACTGGGAG
ACCATGAACCATCTTGGGCTCAGCAAGGAAAAACTTGAGAAACTGAACCTTCTTGAGCCCATGCTCAAAGGCTACAAAAC
AAACGAGCTCGTGCCCATAAGCCTAAATCTTGGGACTGCCGTTACAAGACTGGATGCCAGACTGTCCCTTAAAATGAACG
AGGAGGGAGAGGTTGTGGTCGCCATACACGGAATCCGAAAAGGGCCCAACCTGAACTATCCCTTCTTCGGCCATGAGTTC
AGCAGAGAGGACAAGGACAACCTGCTGAAAACGGGAAACATGGGACGCGTGGTGAATCTGACCAATCCGAAAACCGATGA
GGTGCTGCCGTCTGTGATCAGCGTGGACAGGCTGACCAATGAAGTAGTGGCTTTCAGGGCCGATTACATCAAAATACCCG
ATGAAATAAAAGGTGTAAAACTGAGCGAAGATCAAAAGCAGACCCTTTCGGAAGGAAAACCGCTGCCATTGGAAGGGATG
ATTTCCAAAAAAGGAGAACCGTTCGACGCGACTGTGCAGTTCAATGCCGACAAGCGTTTTGTGGAATTTCTCTTCGACAG
GAGCATTGGCAGCAAACAGGTGCAGGGCAATGAACAGAACCAGACTGGGGAAGCACCGAAAAACTTCAGGGGAAAAGAAC
TGGATGATCAGCAGCATGAGAAGCTGCAGAACGGCCAGACCGTATACATCAGCGGTCTTGTAGACAAGAAAGGCAGGGAG
TACAACGGATACATCACTTTCAGCAAGGATAGCGGCAGGACAGAGTTTTCGTTTGACAACCCGTCAAAACTGAAGGAACA
GGCGAAGCCTGCTGAAGAGAACAGGGTACAGACGGCGGTGAACTCGGAGGGAAAAACCAATGAGGCGACCAAAAACCTGC
AGGAACCCTTAAAATCCGGCCAGTTGGGTCCTGACACCCAGAAACAGAAAGAAGAGCAGCAGCCTGAAACCAAGTCGAAG
GGACGCAAAATGTAG

Upstream 100 bases:

>100_bases
GAGAAAGCCGATTGGAGACTAACGCGGACATCCGGTGCCAGCACTATTGCCGGCGCGGGCGCGGGCACTACTTTCGATTA
TTAACCAAAAAAACAAAGTC

Downstream 100 bases:

>100_bases
CATGTCATGAAAGTAGTTATTGCAGAGAAACCAAGTGCTGCAAGGGAGATAGCCGTACTGCTGGGAGCCAACGAAAAAAA
GGATGGGTACCTGGCAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSKQSAEKAKWPEELSDILLVFDKEKKKIQAVKSIDENGKMQTVDPTDKNRNQFMRVDRNGDFFSNFFSNFLSQLKNPTS
FSFFKVPFAIGVNTAKEMQLHADNPTPQGELLMQQHEIKASEPEQDKKENNPINKNHMEATQTNAETSEYRYKPEQIDWE
TMNHLGLSKEKLEKLNLLEPMLKGYKTNELVPISLNLGTAVTRLDARLSLKMNEEGEVVVAIHGIRKGPNLNYPFFGHEF
SREDKDNLLKTGNMGRVVNLTNPKTDEVLPSVISVDRLTNEVVAFRADYIKIPDEIKGVKLSEDQKQTLSEGKPLPLEGM
ISKKGEPFDATVQFNADKRFVEFLFDRSIGSKQVQGNEQNQTGEAPKNFRGKELDDQQHEKLQNGQTVYISGLVDKKGRE
YNGYITFSKDSGRTEFSFDNPSKLKEQAKPAEENRVQTAVNSEGKTNEATKNLQEPLKSGQLGPDTQKQKEEQQPETKSK
GRKM

Sequences:

>Translated_484_residues
MSKQSAEKAKWPEELSDILLVFDKEKKKIQAVKSIDENGKMQTVDPTDKNRNQFMRVDRNGDFFSNFFSNFLSQLKNPTS
FSFFKVPFAIGVNTAKEMQLHADNPTPQGELLMQQHEIKASEPEQDKKENNPINKNHMEATQTNAETSEYRYKPEQIDWE
TMNHLGLSKEKLEKLNLLEPMLKGYKTNELVPISLNLGTAVTRLDARLSLKMNEEGEVVVAIHGIRKGPNLNYPFFGHEF
SREDKDNLLKTGNMGRVVNLTNPKTDEVLPSVISVDRLTNEVVAFRADYIKIPDEIKGVKLSEDQKQTLSEGKPLPLEGM
ISKKGEPFDATVQFNADKRFVEFLFDRSIGSKQVQGNEQNQTGEAPKNFRGKELDDQQHEKLQNGQTVYISGLVDKKGRE
YNGYITFSKDSGRTEFSFDNPSKLKEQAKPAEENRVQTAVNSEGKTNEATKNLQEPLKSGQLGPDTQKQKEEQQPETKSK
GRKM
>Mature_483_residues
SKQSAEKAKWPEELSDILLVFDKEKKKIQAVKSIDENGKMQTVDPTDKNRNQFMRVDRNGDFFSNFFSNFLSQLKNPTSF
SFFKVPFAIGVNTAKEMQLHADNPTPQGELLMQQHEIKASEPEQDKKENNPINKNHMEATQTNAETSEYRYKPEQIDWET
MNHLGLSKEKLEKLNLLEPMLKGYKTNELVPISLNLGTAVTRLDARLSLKMNEEGEVVVAIHGIRKGPNLNYPFFGHEFS
REDKDNLLKTGNMGRVVNLTNPKTDEVLPSVISVDRLTNEVVAFRADYIKIPDEIKGVKLSEDQKQTLSEGKPLPLEGMI
SKKGEPFDATVQFNADKRFVEFLFDRSIGSKQVQGNEQNQTGEAPKNFRGKELDDQQHEKLQNGQTVYISGLVDKKGREY
NGYITFSKDSGRTEFSFDNPSKLKEQAKPAEENRVQTAVNSEGKTNEATKNLQEPLKSGQLGPDTQKQKEEQQPETKSKG
RKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54996; Mature: 54865

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00097 CARBAMOYLTRANSFERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQSAEKAKWPEELSDILLVFDKEKKKIQAVKSIDENGKMQTVDPTDKNRNQFMRVDRN
CCCCCCHHCCCHHHHHHHEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCC
GDFFSNFFSNFLSQLKNPTSFSFFKVPFAIGVNTAKEMQLHADNPTPQGELLMQQHEIKA
CCHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCHHHEEEECCCCCCCHHHHHHHHHCCC
SEPEQDKKENNPINKNHMEATQTNAETSEYRYKPEQIDWETMNHLGLSKEKLEKLNLLEP
CCCCHHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
MLKGYKTNELVPISLNLGTAVTRLDARLSLKMNEEGEVVVAIHGIRKGPNLNYPFFGHEF
HHCCCCCCCEEEEEECCCHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC
SREDKDNLLKTGNMGRVVNLTNPKTDEVLPSVISVDRLTNEVVAFRADYIKIPDEIKGVK
CCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHCCCC
LSEDQKQTLSEGKPLPLEGMISKKGEPFDATVQFNADKRFVEFLFDRSIGSKQVQGNEQN
CCCHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCC
QTGEAPKNFRGKELDDQQHEKLQNGQTVYISGLVDKKGREYNGYITFSKDSGRTEFSFDN
CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEECCCC
PSKLKEQAKPAEENRVQTAVNSEGKTNEATKNLQEPLKSGQLGPDTQKQKEEQQPETKSK
HHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHC
GRKM
CCCC
>Mature Secondary Structure 
SKQSAEKAKWPEELSDILLVFDKEKKKIQAVKSIDENGKMQTVDPTDKNRNQFMRVDRN
CCCCCHHCCCHHHHHHHEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCC
GDFFSNFFSNFLSQLKNPTSFSFFKVPFAIGVNTAKEMQLHADNPTPQGELLMQQHEIKA
CCHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCHHHEEEECCCCCCCHHHHHHHHHCCC
SEPEQDKKENNPINKNHMEATQTNAETSEYRYKPEQIDWETMNHLGLSKEKLEKLNLLEP
CCCCHHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
MLKGYKTNELVPISLNLGTAVTRLDARLSLKMNEEGEVVVAIHGIRKGPNLNYPFFGHEF
HHCCCCCCCEEEEEECCCHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC
SREDKDNLLKTGNMGRVVNLTNPKTDEVLPSVISVDRLTNEVVAFRADYIKIPDEIKGVK
CCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHCCCC
LSEDQKQTLSEGKPLPLEGMISKKGEPFDATVQFNADKRFVEFLFDRSIGSKQVQGNEQN
CCCHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCC
QTGEAPKNFRGKELDDQQHEKLQNGQTVYISGLVDKKGREYNGYITFSKDSGRTEFSFDN
CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEECCCC
PSKLKEQAKPAEENRVQTAVNSEGKTNEATKNLQEPLKSGQLGPDTQKQKEEQQPETKSK
HHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHC
GRKM
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA