| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300754
Identifier: 146300754
GI number: 146300754
Start: 3553412
End: 3553756
Strand: Reverse
Name: 146300754
Synonym: Fjoh_3005
Alternate gene names: NA
Gene position: 3553756-3553412 (Counterclockwise)
Preceding gene: 146300755
Following gene: 146300753
Centisome position: 58.29
GC content: 53.62
Gene sequence:
>345_bases ATGCGCTGCGCTATGACTGCTTACAGCATCAATAAGGGCATCGGCAGGACCGTCGAATTCAGGGGGCTCAAGGCGCAGTA TCTCTTCATTTTTGCGGGAGGGCTGCTTGGGATGCTCATCTTGACCATGATCCTTTACATGGCAGGCGCCAGTTCTTACA TCTGCCTTTTTTTGGGCGGCGGGGGATCTACGCTGGTTGTCTGGCAGACTTTTGCGCTGAACAGAAAGTACGGAGAGCAT GGGCTGATGAAGATCGCGGCAGGGAAAAGACATCCGCGCTACATCGTGTGCCGCAGGTCGGTACGAAGATGTTTGAAATG TTCAGCCAAATCCGCCGCCTTATGA
Upstream 100 bases:
>100_bases GCAGCGGTGACCCCGACACCAGCAAAACCGCCGCCAGCTGGTTTGGGGCCTGCATCTTTCTGATCGTTGCGGCCACGATC CTAAGATCCTTTTTCCTTTA
Downstream 100 bases:
>100_bases GGAATTCGTCAAAGACAGCAACGCTGGAGAGCAGATTACCCCTGCTGGCGGTGGAGCAGAACTGCATCATCTCCAAGGAT GGGGATGTTACGGCCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Conjugate Transposon Protein; Conjugal Transfer Protein TraF; Transmembrane Conjugate Transposon Protein
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MRCAMTAYSINKGIGRTVEFRGLKAQYLFIFAGGLLGMLILTMILYMAGASSYICLFLGGGGSTLVVWQTFALNRKYGEH GLMKIAAGKRHPRYIVCRRSVRRCLKCSAKSAAL
Sequences:
>Translated_114_residues MRCAMTAYSINKGIGRTVEFRGLKAQYLFIFAGGLLGMLILTMILYMAGASSYICLFLGGGGSTLVVWQTFALNRKYGEH GLMKIAAGKRHPRYIVCRRSVRRCLKCSAKSAAL >Mature_114_residues MRCAMTAYSINKGIGRTVEFRGLKAQYLFIFAGGLLGMLILTMILYMAGASSYICLFLGGGGSTLVVWQTFALNRKYGEH GLMKIAAGKRHPRYIVCRRSVRRCLKCSAKSAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12547; Mature: 12547
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCAMTAYSINKGIGRTVEFRGLKAQYLFIFAGGLLGMLILTMILYMAGASSYICLFLGG CCCCCCHHHHCCCCCCEEEECCCCCEEHEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEC GGSTLVVWQTFALNRKYGEHGLMKIAAGKRHPRYIVCRRSVRRCLKCSAKSAAL CCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRCAMTAYSINKGIGRTVEFRGLKAQYLFIFAGGLLGMLILTMILYMAGASSYICLFLGG CCCCCCHHHHCCCCCCEEEECCCCCEEHEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEC GGSTLVVWQTFALNRKYGEHGLMKIAAGKRHPRYIVCRRSVRRCLKCSAKSAAL CCCEEEEEEEEHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA