| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300751
Identifier: 146300751
GI number: 146300751
Start: 3549251
End: 3550249
Strand: Reverse
Name: 146300751
Synonym: Fjoh_3002
Alternate gene names: NA
Gene position: 3550249-3549251 (Counterclockwise)
Preceding gene: 146300752
Following gene: 146300750
Centisome position: 58.23
GC content: 56.46
Gene sequence:
>999_bases ATGGAGTTCAATAATCTCCATGAGGTGCTCCGCTCGCTTTACGATGACATGATGCCCCTTGCGGGGGATATGGCGGCGGT TGCGAAGGGGCTGGCAGGGCTTGGAGCGCTGTTCTACGTGGCACTGCATGTCTGGCAGGCGCTGGCAAGGGCGGAACCCA TTGACGTCTATCCGATGCTGCGTCCCTTCGCGCTTGGCCTGTGCATCATGTTCTTCCCGAGCATCGTTCTGGGAAGCATC AATGCGGTGCTGAGTCCGATAGTCAGCGGAACCCACGGCATACTGCAGGGACAGGTTCTTGACCTTAACAGGCTGCAGCA GCAGAAGGACCAGCTGGAATATGAGGCGATGGTCCGCAATCCCGAAACCTCTTATATGGCTTCAGATGAGGAATTCGAGA AGAAGCTCGACGAGCTGGGATGGTCGCCCTCGGATATCGGGACCATGGCGGGGATGTATATGGACCGGCAGGCCTATCAG ATGGAAAAGATGATAAAGCAGTGGTTCCGGAACTTTCTGGAGGTGCTTTTCCAGGCCGCGGCGCTGGTGATCGACACCAT AAGGACGTTTTTCCTCATAGTGCTTTCCATCCTTGGGCCGATTGCTTTTGCCATATCGGTCTGGGACGGTTTCCAGTCGA CGCTCACCCAGTGGATCACCAGATATGTCAGCGTGTATCTGTGGCTTCCCGTAGCGGACCTTTTCAGTTCCATGCTGGCG CGCATCCAGTCGCTGATCATCGAAAGGGACATCGAGATGCTTTCGGACCCGGCTTTCATACCCGACACCTCCAATACCGT CTACGTGATTTTCATGATCATAGGCATTGTGGGCTATTTCACGGTGCCGACCGTGACGGGCTGGATCATCCAGGCCGGAG GCGGAGGCAATTTCATGCGCAATGTGAGCCAGACGGCCATGAAAGCCGGGAACATCGCCGGAGCGGGCGCGGGTTCCGCC GCAGGAAATATAGCAGGAAGGCTGGTCAGCAGATCCTGA
Upstream 100 bases:
>100_bases ACAAGAACATATCGGTGAGCTATCTCAGGGCGAAAAAGAAGAACGACGCCAAAAGCGTGCTTGACCTGTACGGGACCTCC AACCAGAAATACTGGTAGGC
Downstream 100 bases:
>100_bases CAACCGATAAAAACAAAGAAAATGGAATTCAAGACATTACGAAACATAGAAAACAGTTTCCGGCAGATCAGGCTCTACGC CATCGTTTTTGCACTGCTCT
Product: TraJ family protein conjugative transposon
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MEFNNLHEVLRSLYDDMMPLAGDMAAVAKGLAGLGALFYVALHVWQALARAEPIDVYPMLRPFALGLCIMFFPSIVLGSI NAVLSPIVSGTHGILQGQVLDLNRLQQQKDQLEYEAMVRNPETSYMASDEEFEKKLDELGWSPSDIGTMAGMYMDRQAYQ MEKMIKQWFRNFLEVLFQAAALVIDTIRTFFLIVLSILGPIAFAISVWDGFQSTLTQWITRYVSVYLWLPVADLFSSMLA RIQSLIIERDIEMLSDPAFIPDTSNTVYVIFMIIGIVGYFTVPTVTGWIIQAGGGGNFMRNVSQTAMKAGNIAGAGAGSA AGNIAGRLVSRS
Sequences:
>Translated_332_residues MEFNNLHEVLRSLYDDMMPLAGDMAAVAKGLAGLGALFYVALHVWQALARAEPIDVYPMLRPFALGLCIMFFPSIVLGSI NAVLSPIVSGTHGILQGQVLDLNRLQQQKDQLEYEAMVRNPETSYMASDEEFEKKLDELGWSPSDIGTMAGMYMDRQAYQ MEKMIKQWFRNFLEVLFQAAALVIDTIRTFFLIVLSILGPIAFAISVWDGFQSTLTQWITRYVSVYLWLPVADLFSSMLA RIQSLIIERDIEMLSDPAFIPDTSNTVYVIFMIIGIVGYFTVPTVTGWIIQAGGGGNFMRNVSQTAMKAGNIAGAGAGSA AGNIAGRLVSRS >Mature_332_residues MEFNNLHEVLRSLYDDMMPLAGDMAAVAKGLAGLGALFYVALHVWQALARAEPIDVYPMLRPFALGLCIMFFPSIVLGSI NAVLSPIVSGTHGILQGQVLDLNRLQQQKDQLEYEAMVRNPETSYMASDEEFEKKLDELGWSPSDIGTMAGMYMDRQAYQ MEKMIKQWFRNFLEVLFQAAALVIDTIRTFFLIVLSILGPIAFAISVWDGFQSTLTQWITRYVSVYLWLPVADLFSSMLA RIQSLIIERDIEMLSDPAFIPDTSNTVYVIFMIIGIVGYFTVPTVTGWIIQAGGGGNFMRNVSQTAMKAGNIAGAGAGSA AGNIAGRLVSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36668; Mature: 36668
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFNNLHEVLRSLYDDMMPLAGDMAAVAKGLAGLGALFYVALHVWQALARAEPIDVYPML CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RPFALGLCIMFFPSIVLGSINAVLSPIVSGTHGILQGQVLDLNRLQQQKDQLEYEAMVRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHCCHHHHHHHHHHHHHHHHHCC PETSYMASDEEFEKKLDELGWSPSDIGTMAGMYMDRQAYQMEKMIKQWFRNFLEVLFQAA CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVIDTIRTFFLIVLSILGPIAFAISVWDGFQSTLTQWITRYVSVYLWLPVADLFSSMLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIQSLIIERDIEMLSDPAFIPDTSNTVYVIFMIIGIVGYFTVPTVTGWIIQAGGGGNFMR HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH NVSQTAMKAGNIAGAGAGSAAGNIAGRLVSRS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MEFNNLHEVLRSLYDDMMPLAGDMAAVAKGLAGLGALFYVALHVWQALARAEPIDVYPML CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RPFALGLCIMFFPSIVLGSINAVLSPIVSGTHGILQGQVLDLNRLQQQKDQLEYEAMVRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHCCHHHHHHHHHHHHHHHHHCC PETSYMASDEEFEKKLDELGWSPSDIGTMAGMYMDRQAYQMEKMIKQWFRNFLEVLFQAA CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVIDTIRTFFLIVLSILGPIAFAISVWDGFQSTLTQWITRYVSVYLWLPVADLFSSMLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIQSLIIERDIEMLSDPAFIPDTSNTVYVIFMIIGIVGYFTVPTVTGWIIQAGGGGNFMR HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH NVSQTAMKAGNIAGAGAGSAAGNIAGRLVSRS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA