Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300737

Identifier: 146300737

GI number: 146300737

Start: 3537079

End: 3537546

Strand: Direct

Name: 146300737

Synonym: Fjoh_2988

Alternate gene names: NA

Gene position: 3537079-3537546 (Clockwise)

Preceding gene: 146300736

Following gene: 146300738

Centisome position: 58.01

GC content: 36.75

Gene sequence:

>468_bases
ATGAAAATATCAAAAATCAAAGAAATCTTACCAGCATTAGATAATGTTGAATTCCAATTAGAGAACGGAATATTTGTACC
GGAACATTTCCACGTTACGGAAGTTGGGCAAATCACTAAAAATTTTATTGACTGCGGTGGCGTAGTTCGCACCGAAAAAG
TTGTCAATTTTCAATTATGGAATGCCAACGATTTTGAACACAGGTTAAAGCCAACCAAATTATTAAGCATCATCAAACTT
TCGGAAGAAAAACTGGGTATCGAAGATGCCGAGATAGAAGTGGAATACCAAAGCGAAACAATTGGTAAATATGATTTGGA
TTTTAACGGAAACCATTTTGTATTAAAGAACAAACAGACCGCTTGTTTAGCGCAAGATACTTGCGGTATTCCTACTGAAA
AGCAAAAGAAAAATTTGGCAGCATTACCAGCGAATAATGCTTGTACACCCGGTGGCGGATGCTGTTAA

Upstream 100 bases:

>100_bases
TATGTTCTTTGTAGATAATGTAGGGGTTTATAAATGCTGTTAAGCATTTTTTTTAATATATTAATCGTAATAAAGCAATA
TAACAATTAAATAAAAAACA

Downstream 100 bases:

>100_bases
TCATAAAATCAAAAGAGAAATATGGAACATTTCAATCGAAAATCCCACTGGGAAAATATTTACGAGAGCAAACCTTTAGA
AACCGTGAGCTGGTATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKISKIKEILPALDNVEFQLENGIFVPEHFHVTEVGQITKNFIDCGGVVRTEKVVNFQLWNANDFEHRLKPTKLLSIIKL
SEEKLGIEDAEIEVEYQSETIGKYDLDFNGNHFVLKNKQTACLAQDTCGIPTEKQKKNLAALPANNACTPGGGCC

Sequences:

>Translated_155_residues
MKISKIKEILPALDNVEFQLENGIFVPEHFHVTEVGQITKNFIDCGGVVRTEKVVNFQLWNANDFEHRLKPTKLLSIIKL
SEEKLGIEDAEIEVEYQSETIGKYDLDFNGNHFVLKNKQTACLAQDTCGIPTEKQKKNLAALPANNACTPGGGCC
>Mature_155_residues
MKISKIKEILPALDNVEFQLENGIFVPEHFHVTEVGQITKNFIDCGGVVRTEKVVNFQLWNANDFEHRLKPTKLLSIIKL
SEEKLGIEDAEIEVEYQSETIGKYDLDFNGNHFVLKNKQTACLAQDTCGIPTEKQKKNLAALPANNACTPGGGCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17292; Mature: 17292

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKIKEILPALDNVEFQLENGIFVPEHFHVTEVGQITKNFIDCGGVVRTEKVVNFQLW
CCHHHHHHHHHHHCCCEEEECCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEE
NANDFEHRLKPTKLLSIIKLSEEKLGIEDAEIEVEYQSETIGKYDLDFNGNHFVLKNKQT
CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCEEEEECCCC
ACLAQDTCGIPTEKQKKNLAALPANNACTPGGGCC
EEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKISKIKEILPALDNVEFQLENGIFVPEHFHVTEVGQITKNFIDCGGVVRTEKVVNFQLW
CCHHHHHHHHHHHCCCEEEECCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEE
NANDFEHRLKPTKLLSIIKLSEEKLGIEDAEIEVEYQSETIGKYDLDFNGNHFVLKNKQT
CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCEEEEECCCC
ACLAQDTCGIPTEKQKKNLAALPANNACTPGGGCC
EEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA