Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300730

Identifier: 146300730

GI number: 146300730

Start: 3532754

End: 3533170

Strand: Direct

Name: 146300730

Synonym: Fjoh_2981

Alternate gene names: NA

Gene position: 3532754-3533170 (Clockwise)

Preceding gene: 146300729

Following gene: 146300731

Centisome position: 57.94

GC content: 48.92

Gene sequence:

>417_bases
ATGAACAGCAATTTTTTCAATCAGATAAGACAGATGGACATTTCAGGGGATCTGCACCTGACCATCGCAAAATCGACCGA
AGGCATCCTTGTCGTATCGGTCATGCTTAAAAACGAAGCCTGCGGGGACAATGCCAAAAACATCATACCCCCGCTCAACC
TGAGAGGAACAGCAGAGGAACTCGACAGCGGTTTCTTTCACACCATTACCGCCCCGATGCAGAGCGCATCGGGACTGATG
GCAGACATGGAATCTTTCATGAAACAGCTGGAACAGGTGAAAATGCAGTCGGCAAAGGAGAAACAGAAAGCCGATGCGCA
GAAAAAGCAGCACGAAGCCAAAGACAAAAGATTCAGCGATGCCATGACAAAGGCTGAAGAACTGGAAAACAGGGCAGATT
CCGTGAGGCTTGGATGA

Upstream 100 bases:

>100_bases
TGCTGAATTAAAAAAAGACGGGCGGCTGCCTTCAAAGCGGCCGTCTTACAGCTTCTCAGTATGTGAAGCCGATAAAAAAC
AGACATTAAAATCTACAGCT

Downstream 100 bases:

>100_bases
AAGTTCCCGAAGCGGCGGAATTTCCCGACAGAGCCGACGAAATACGCAGAAAGAGAACATCCCTGTCGGACAGGTTCTCC
GCTCCGAGCCTTTTCGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNSNFFNQIRQMDISGDLHLTIAKSTEGILVVSVMLKNEACGDNAKNIIPPLNLRGTAEELDSGFFHTITAPMQSASGLM
ADMESFMKQLEQVKMQSAKEKQKADAQKKQHEAKDKRFSDAMTKAEELENRADSVRLG

Sequences:

>Translated_138_residues
MNSNFFNQIRQMDISGDLHLTIAKSTEGILVVSVMLKNEACGDNAKNIIPPLNLRGTAEELDSGFFHTITAPMQSASGLM
ADMESFMKQLEQVKMQSAKEKQKADAQKKQHEAKDKRFSDAMTKAEELENRADSVRLG
>Mature_138_residues
MNSNFFNQIRQMDISGDLHLTIAKSTEGILVVSVMLKNEACGDNAKNIIPPLNLRGTAEELDSGFFHTITAPMQSASGLM
ADMESFMKQLEQVKMQSAKEKQKADAQKKQHEAKDKRFSDAMTKAEELENRADSVRLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15349; Mature: 15349

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNFFNQIRQMDISGDLHLTIAKSTEGILVVSVMLKNEACGDNAKNIIPPLNLRGTAEE
CCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEHEEHHCCCCCCCCCCCCCCCCCCCCHHH
LDSGFFHTITAPMQSASGLMADMESFMKQLEQVKMQSAKEKQKADAQKKQHEAKDKRFSD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTKAEELENRADSVRLG
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSNFFNQIRQMDISGDLHLTIAKSTEGILVVSVMLKNEACGDNAKNIIPPLNLRGTAEE
CCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEHEEHHCCCCCCCCCCCCCCCCCCCCHHH
LDSGFFHTITAPMQSASGLMADMESFMKQLEQVKMQSAKEKQKADAQKKQHEAKDKRFSD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTKAEELENRADSVRLG
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA