Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300707

Identifier: 146300707

GI number: 146300707

Start: 3505239

End: 3507068

Strand: Direct

Name: 146300707

Synonym: Fjoh_2958

Alternate gene names: NA

Gene position: 3505239-3507068 (Clockwise)

Preceding gene: 146300706

Following gene: 146300708

Centisome position: 57.49

GC content: 32.9

Gene sequence:

>1830_bases
ATGTTACTAAATAAAAAAATAATTGTTTTTATTTCCTTATGCTTTTGTTTACAAAGCATTTGCGCTCAGACAGATAAAAC
AAAAAAGGAAAATCCTCCCAAAAAAGACAGTACGGAGATTTACACCAAGATTAAAAATTATTCTAAGAAAAATAAATTTA
CGCAAACACTTCATAAACTGCTTTTTAGAACCAAAAGACCTAAAAAAAAGGAAATTATTATACCTACTGATTCTCAAAAT
TATGAAGGCAAAATTATTAGAAATATAAATATTGTTACACTCGATCCGTTTGGATATTCCATTACAGATACAACTGCAAA
ACCAAAAAATTGGGGAGAAAGAACCGGAAACAGACTGCATTTAAAAACCAAGAAAATAGCCATCTATAATCTTCTTTTAT
TTAAAAGAAACAGTGTTTACGATACTTATAAAGTACAGGAATCTGAGCGTTTAATTCGTGCCCAAAGATATGTTACAGCA
GTTCGAATTACTAACGAACTGGCAAGTCCGGCTTCAGATTCTGTTGATGTAACCATCAGGGTTTTGGATTCCTGGAGTAC
AATTCCGCGTTTTTCAATATCCAGCAGCAGAGTTTCTGTAGGATTTAAAGAAAAAGATTTTTTTGGTTCAGGTCAACAAC
TTGAATATCGTTTTACAAACAGGTTTGATGATGGAGCAAATGGAAACGATATTACATACACCGTTCCTAATATAAAAAAC
ACCTATATCTCGACCATCCTTCACTACAATATGGATTTAGATAATAATTATACTAAAAGTATTGATATTGAAAGGGATTT
CTATTCTCCGCTGACTAAATGGGCGGGCGGTGTTTTTGTAGGCCAGAATTTTAGGAAAGATACTCTGCAGGCACCAGATC
AATCGTTTGCTTTTCAAACTTTCAAAAACAATTTTCAGGATTTATGGGTTGGTAAAGCCACAAAGGTTTATGAAGATGAT
AATGAAGCTATTACTAATTTAATTACTTCTGCGCGATTTTTAAACGTCAATTACAGCGAATCGCCAGATTCTATACATGA
TCCTACCCATTTCTATTCTGATGAAAAACTGCTCTTAATGGGCGTTGGACTTAACAGACGTAAATTTATCAAAGACAGCT
ATATTTTTAGAAACGGTCAGATTGAAGACGTTCCTATTGGAAGAATTTATGGAGTTACATTTGGCTACCAGTATAAAAAT
AATATCTGGAGACCTTATGCCGGGGCACAATTTTCTTTTGGAAACTATTATCGTTTAGGTTTTTTAAGTATGAATTTTGA
AGCTGGAACTTATTTTCACGAATCAAAAACGTATCAGACATCTTATTTATTTGAAGCCAATTATTTTACTAAGCTTTTTA
GTATAGGAAACTGGAAATTACGACAATTCGTTAATCCAAAAGTAGTTGTTGGAGCAAATCACGAAGATATTATAGGAGAT
CAGCTTAACGTAAATGAAGAAAACGGTCTGGCAGGATTTAGGACTGCATTATACGGAACAAGTAAAACAGTTTTATCCTT
GCAGACTCAAACCTATTCTCCGCATGCACTTTGGGGATTTCGTTTAAATCCGTTTTTTAATTATTCTATTGCTTTTTTAG
GAAATCCTAACAGCGCAATGTTTGACAGCAAATCGTATTCTAAAGTAACTTTAGGACTATTAATCAGTAATGACTATTTG
GTTTTTAGTTCCTTTCAGCTGTCACTGTCATACTATCCAAGTATTCCGCTTCAGGGTGATAATGTTTTCAAAACCAATAC
TTTTGAAACTACAGATTATGGTTTGCAAAATTTTGAACTTGCAAAGCCAAGAATTGTAGAATATAAATAA

Upstream 100 bases:

>100_bases
CACAGGAATAAAATAATCTCTTGATTATTTAAATATATCTGTTATTTATCTTAAATTCATAGAATAATCTGCCTTAAAAT
AAAGTTTTAAACCGATCTGA

Downstream 100 bases:

>100_bases
TTAAAAATATTTTTATTTTTTTTTGATTTATTTAAGACTCAACAAACACTTTAAAAATCAATATTTTACAATAAACTTAC
CTTTATTCAACTCGACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MLLNKKIIVFISLCFCLQSICAQTDKTKKENPPKKDSTEIYTKIKNYSKKNKFTQTLHKLLFRTKRPKKKEIIIPTDSQN
YEGKIIRNINIVTLDPFGYSITDTTAKPKNWGERTGNRLHLKTKKIAIYNLLLFKRNSVYDTYKVQESERLIRAQRYVTA
VRITNELASPASDSVDVTIRVLDSWSTIPRFSISSSRVSVGFKEKDFFGSGQQLEYRFTNRFDDGANGNDITYTVPNIKN
TYISTILHYNMDLDNNYTKSIDIERDFYSPLTKWAGGVFVGQNFRKDTLQAPDQSFAFQTFKNNFQDLWVGKATKVYEDD
NEAITNLITSARFLNVNYSESPDSIHDPTHFYSDEKLLLMGVGLNRRKFIKDSYIFRNGQIEDVPIGRIYGVTFGYQYKN
NIWRPYAGAQFSFGNYYRLGFLSMNFEAGTYFHESKTYQTSYLFEANYFTKLFSIGNWKLRQFVNPKVVVGANHEDIIGD
QLNVNEENGLAGFRTALYGTSKTVLSLQTQTYSPHALWGFRLNPFFNYSIAFLGNPNSAMFDSKSYSKVTLGLLISNDYL
VFSSFQLSLSYYPSIPLQGDNVFKTNTFETTDYGLQNFELAKPRIVEYK

Sequences:

>Translated_609_residues
MLLNKKIIVFISLCFCLQSICAQTDKTKKENPPKKDSTEIYTKIKNYSKKNKFTQTLHKLLFRTKRPKKKEIIIPTDSQN
YEGKIIRNINIVTLDPFGYSITDTTAKPKNWGERTGNRLHLKTKKIAIYNLLLFKRNSVYDTYKVQESERLIRAQRYVTA
VRITNELASPASDSVDVTIRVLDSWSTIPRFSISSSRVSVGFKEKDFFGSGQQLEYRFTNRFDDGANGNDITYTVPNIKN
TYISTILHYNMDLDNNYTKSIDIERDFYSPLTKWAGGVFVGQNFRKDTLQAPDQSFAFQTFKNNFQDLWVGKATKVYEDD
NEAITNLITSARFLNVNYSESPDSIHDPTHFYSDEKLLLMGVGLNRRKFIKDSYIFRNGQIEDVPIGRIYGVTFGYQYKN
NIWRPYAGAQFSFGNYYRLGFLSMNFEAGTYFHESKTYQTSYLFEANYFTKLFSIGNWKLRQFVNPKVVVGANHEDIIGD
QLNVNEENGLAGFRTALYGTSKTVLSLQTQTYSPHALWGFRLNPFFNYSIAFLGNPNSAMFDSKSYSKVTLGLLISNDYL
VFSSFQLSLSYYPSIPLQGDNVFKTNTFETTDYGLQNFELAKPRIVEYK
>Mature_609_residues
MLLNKKIIVFISLCFCLQSICAQTDKTKKENPPKKDSTEIYTKIKNYSKKNKFTQTLHKLLFRTKRPKKKEIIIPTDSQN
YEGKIIRNINIVTLDPFGYSITDTTAKPKNWGERTGNRLHLKTKKIAIYNLLLFKRNSVYDTYKVQESERLIRAQRYVTA
VRITNELASPASDSVDVTIRVLDSWSTIPRFSISSSRVSVGFKEKDFFGSGQQLEYRFTNRFDDGANGNDITYTVPNIKN
TYISTILHYNMDLDNNYTKSIDIERDFYSPLTKWAGGVFVGQNFRKDTLQAPDQSFAFQTFKNNFQDLWVGKATKVYEDD
NEAITNLITSARFLNVNYSESPDSIHDPTHFYSDEKLLLMGVGLNRRKFIKDSYIFRNGQIEDVPIGRIYGVTFGYQYKN
NIWRPYAGAQFSFGNYYRLGFLSMNFEAGTYFHESKTYQTSYLFEANYFTKLFSIGNWKLRQFVNPKVVVGANHEDIIGD
QLNVNEENGLAGFRTALYGTSKTVLSLQTQTYSPHALWGFRLNPFFNYSIAFLGNPNSAMFDSKSYSKVTLGLLISNDYL
VFSSFQLSLSYYPSIPLQGDNVFKTNTFETTDYGLQNFELAKPRIVEYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70284; Mature: 70284

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNKKIIVFISLCFCLQSICAQTDKTKKENPPKKDSTEIYTKIKNYSKKNKFTQTLHKL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFRTKRPKKKEIIIPTDSQNYEGKIIRNINIVTLDPFGYSITDTTAKPKNWGERTGNRLH
HHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCHHHCCCEEE
LKTKKIAIYNLLLFKRNSVYDTYKVQESERLIRAQRYVTAVRITNELASPASDSVDVTIR
EEEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHEEEEEEHHHHCCCCCCCEEEEEE
VLDSWSTIPRFSISSSRVSVGFKEKDFFGSGQQLEYRFTNRFDDGANGNDITYTVPNIKN
EEECCCCCCCEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCH
TYISTILHYNMDLDNNYTKSIDIERDFYSPLTKWAGGVFVGQNFRKDTLQAPDQSFAFQT
HHEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCHHHHCCCCHHHHHHH
FKNNFQDLWVGKATKVYEDDNEAITNLITSARFLNVNYSESPDSIHDPTHFYSDEKLLLM
HHCCCCEEECCCCEEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
GVGLNRRKFIKDSYIFRNGQIEDVPIGRIYGVTFGYQYKNNIWRPYAGAQFSFGNYYRLG
ECCCCHHHHHCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEE
FLSMNFEAGTYFHESKTYQTSYLFEANYFTKLFSIGNWKLRQFVNPKVVVGANHEDIIGD
EEEEECCCCEEEECCCCEEEEEEEECHHHHHHHHCCCEEEHHCCCCEEEEECCCCCCCCC
QLNVNEENGLAGFRTALYGTSKTVLSLQTQTYSPHALWGFRLNPFFNYSIAFLGNPNSAM
CCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCEECEEEEEEECCCCCE
FDSKSYSKVTLGLLISNDYLVFSSFQLSLSYYPSIPLQGDNVFKTNTFETTDYGLQNFEL
ECCCCCCEEEEEEEEECCEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEC
AKPRIVEYK
CCCEEEECC
>Mature Secondary Structure
MLLNKKIIVFISLCFCLQSICAQTDKTKKENPPKKDSTEIYTKIKNYSKKNKFTQTLHKL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFRTKRPKKKEIIIPTDSQNYEGKIIRNINIVTLDPFGYSITDTTAKPKNWGERTGNRLH
HHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCHHHCCCEEE
LKTKKIAIYNLLLFKRNSVYDTYKVQESERLIRAQRYVTAVRITNELASPASDSVDVTIR
EEEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHEEEEEEHHHHCCCCCCCEEEEEE
VLDSWSTIPRFSISSSRVSVGFKEKDFFGSGQQLEYRFTNRFDDGANGNDITYTVPNIKN
EEECCCCCCCEEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCH
TYISTILHYNMDLDNNYTKSIDIERDFYSPLTKWAGGVFVGQNFRKDTLQAPDQSFAFQT
HHEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCHHHHCCCCHHHHHHH
FKNNFQDLWVGKATKVYEDDNEAITNLITSARFLNVNYSESPDSIHDPTHFYSDEKLLLM
HHCCCCEEECCCCEEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
GVGLNRRKFIKDSYIFRNGQIEDVPIGRIYGVTFGYQYKNNIWRPYAGAQFSFGNYYRLG
ECCCCHHHHHCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEE
FLSMNFEAGTYFHESKTYQTSYLFEANYFTKLFSIGNWKLRQFVNPKVVVGANHEDIIGD
EEEEECCCCEEEECCCCEEEEEEEECHHHHHHHHCCCEEEHHCCCCEEEEECCCCCCCCC
QLNVNEENGLAGFRTALYGTSKTVLSLQTQTYSPHALWGFRLNPFFNYSIAFLGNPNSAM
CCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCEECEEEEEEECCCCCE
FDSKSYSKVTLGLLISNDYLVFSSFQLSLSYYPSIPLQGDNVFKTNTFETTDYGLQNFEL
ECCCCCCEEEEEEEEECCEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEC
AKPRIVEYK
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA