| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is mhpC [C]
Identifier: 146300699
GI number: 146300699
Start: 3495599
End: 3496984
Strand: Direct
Name: mhpC [C]
Synonym: Fjoh_2950
Alternate gene names: 146300699
Gene position: 3495599-3496984 (Clockwise)
Preceding gene: 146300695
Following gene: 146300701
Centisome position: 57.33
GC content: 30.66
Gene sequence:
>1386_bases ATGAAAAAAAATACTATTCTGCATGTGTTTATGTTTTTAACTTCATTAATAAATGCTCAAAACAACACTAAAATTTTAAA TTCAAAAAACTCAGATTCAATGGAAATTTTAAAAATTCAAAGCCATATTCCCGAACTCAAAATTGCAATTAACCATATAA TTCCACAAAAGACTTCTAATGATTATCCTGTTCTTTTTCTTCATGGATCATCATTTCCTGCTGAACTTTCATTTGGTTTT AAAATGAATAATTCTTCCTGGATGCAAAATTTATCTGAAAATGGATATAATGTTTATGCATTAGATTTTTTAGGTTATGG AAATTCTGACCGATATCCAGAAATGAAAAGTCCGTCAAACAAGATTGTTGGAAGAGCTGCTGAAGTTTCTTTGGACGTAG AAAAAGCAGTAGATTTTATTTTAAAAGAAACTGGTAAATCTAAGATTTACTTAATTGGCCATTCTTGGGGAGGTTCTGTT GCTGCTTTATACGCATCTAAAATTCCTGATAACGTAGAAAAATTAGTTCTGTTTGCTGCAATAACAGCTAGAAATGAAAA TACAGAATTTGAAAAAATATCAAATTCATTCGAAGAAATGACTCCGCAACAGCGTATAAGTGCTATGAAGAGTTTAACAC CAGTAAACAGAGAATGTCAATTAGAACCGGAAATATTTGAATCTTGGGGAGAAATTTGGAAAAAAAGCGATCCTTTGACT TTGAAATCTGAAAATGTGACTGTTCGATTCCCTTCTGGGCCTTCAGCTGACGTTCAGGATTTATTACATAACAACTCATA TTATGATCCAAAAAAAATCACTGTAAAAACAATGATTATAAGAGGTGAATGGGATAAATACCCTGATAATAATGATGCTG AAGGCTTGTTTGTTTCATTGGAAAATGCGGCATCTAAAAAATATGTTGTTATTCAAAAAGGAACACATGTTATGCATTTA GAAAAAAGCAGAAATGATTTGTACAACGAAACTTTAAGTTTCCTAAAAGACAATAAAAATACTTTGGAGGATAAAGAACA CGATATTGCTGTAATTTTTGAGGTCATTCCAAATACTGCTTACAAACAAAACTATCTTGATATTGCATTAAGTCTTAAAC CTGAATTAGAAAAAATAGAAGGCTTTATTTCTATCGAAAGATTTCAAAGTATTTCTAATCCCGAAAAAATACTATCATTG TCTTTTTGGAAAAATGAAAAAGCTATTGAAAAATGGCGCAATCTGGAAAGTCATAGAAATGCACAATCAAATGGCAGAGA TTTTATATTTAAAGACTATCATCTGCGAATAGCTAATGTGGTGAGAGACTATGGAATGTTTGACCGCAACGAAACTCCTA ATGATAGTAAAAGAGTAAATAAGTAA
Upstream 100 bases:
>100_bases ACTTATTCTGCTAATTTCATTATTCATACCCTGCAATCATAGTTAAGTTTCTATTTAACTGTCAAAGTTATTCCAATTTT ATTTTTGTAAAAAAAATACA
Downstream 100 bases:
>100_bases AATAAAAAAAGGTTCAACTTAATTGTTGAACCTTTTTTATTTATCTAAAGTCGAATACTATTTCTTTTTATAATATTTGC GGTATTTTGGGTATGTAACT
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Hydrolase Fold Protein; Antibiotic Biosynthesis Monooxygenase Family; Monooxygenase; Hydrolase Or Acyltransferase; Antibiotic Biosynthesis Monooxygenase Domain Protein; Extracellular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKKNTILHVFMFLTSLINAQNNTKILNSKNSDSMEILKIQSHIPELKIAINHIIPQKTSNDYPVLFLHGSSFPAELSFGF KMNNSSWMQNLSENGYNVYALDFLGYGNSDRYPEMKSPSNKIVGRAAEVSLDVEKAVDFILKETGKSKIYLIGHSWGGSV AALYASKIPDNVEKLVLFAAITARNENTEFEKISNSFEEMTPQQRISAMKSLTPVNRECQLEPEIFESWGEIWKKSDPLT LKSENVTVRFPSGPSADVQDLLHNNSYYDPKKITVKTMIIRGEWDKYPDNNDAEGLFVSLENAASKKYVVIQKGTHVMHL EKSRNDLYNETLSFLKDNKNTLEDKEHDIAVIFEVIPNTAYKQNYLDIALSLKPELEKIEGFISIERFQSISNPEKILSL SFWKNEKAIEKWRNLESHRNAQSNGRDFIFKDYHLRIANVVRDYGMFDRNETPNDSKRVNK
Sequences:
>Translated_461_residues MKKNTILHVFMFLTSLINAQNNTKILNSKNSDSMEILKIQSHIPELKIAINHIIPQKTSNDYPVLFLHGSSFPAELSFGF KMNNSSWMQNLSENGYNVYALDFLGYGNSDRYPEMKSPSNKIVGRAAEVSLDVEKAVDFILKETGKSKIYLIGHSWGGSV AALYASKIPDNVEKLVLFAAITARNENTEFEKISNSFEEMTPQQRISAMKSLTPVNRECQLEPEIFESWGEIWKKSDPLT LKSENVTVRFPSGPSADVQDLLHNNSYYDPKKITVKTMIIRGEWDKYPDNNDAEGLFVSLENAASKKYVVIQKGTHVMHL EKSRNDLYNETLSFLKDNKNTLEDKEHDIAVIFEVIPNTAYKQNYLDIALSLKPELEKIEGFISIERFQSISNPEKILSL SFWKNEKAIEKWRNLESHRNAQSNGRDFIFKDYHLRIANVVRDYGMFDRNETPNDSKRVNK >Mature_461_residues MKKNTILHVFMFLTSLINAQNNTKILNSKNSDSMEILKIQSHIPELKIAINHIIPQKTSNDYPVLFLHGSSFPAELSFGF KMNNSSWMQNLSENGYNVYALDFLGYGNSDRYPEMKSPSNKIVGRAAEVSLDVEKAVDFILKETGKSKIYLIGHSWGGSV AALYASKIPDNVEKLVLFAAITARNENTEFEKISNSFEEMTPQQRISAMKSLTPVNRECQLEPEIFESWGEIWKKSDPLT LKSENVTVRFPSGPSADVQDLLHNNSYYDPKKITVKTMIIRGEWDKYPDNNDAEGLFVSLENAASKKYVVIQKGTHVMHL EKSRNDLYNETLSFLKDNKNTLEDKEHDIAVIFEVIPNTAYKQNYLDIALSLKPELEKIEGFISIERFQSISNPEKILSL SFWKNEKAIEKWRNLESHRNAQSNGRDFIFKDYHLRIANVVRDYGMFDRNETPNDSKRVNK
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 52871; Mature: 52871
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNTILHVFMFLTSLINAQNNTKILNSKNSDSMEILKIQSHIPELKIAINHIIPQKTSN CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHCCCHHEEHHHHHCCCCCCC DYPVLFLHGSSFPAELSFGFKMNNSSWMQNLSENGYNVYALDFLGYGNSDRYPEMKSPSN CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCH KIVGRAAEVSLDVEKAVDFILKETGKSKIYLIGHSWGGSVAALYASKIPDNVEKLVLFAA HHCCCHHHEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHH ITARNENTEFEKISNSFEEMTPQQRISAMKSLTPVNRECQLEPEIFESWGEIWKKSDPLT EECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCE LKSENVTVRFPSGPSADVQDLLHNNSYYDPKKITVKTMIIRGEWDKYPDNNDAEGLFVSL EECCCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEE ENAASKKYVVIQKGTHVMHLEKSRNDLYNETLSFLKDNKNTLEDKEHDIAVIFEVIPNTA ECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC YKQNYLDIALSLKPELEKIEGFISIERFQSISNPEKILSLSFWKNEKAIEKWRNLESHRN HHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHCHHHHCC AQSNGRDFIFKDYHLRIANVVRDYGMFDRNETPNDSKRVNK CCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC >Mature Secondary Structure MKKNTILHVFMFLTSLINAQNNTKILNSKNSDSMEILKIQSHIPELKIAINHIIPQKTSN CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHCCCHHEEHHHHHCCCCCCC DYPVLFLHGSSFPAELSFGFKMNNSSWMQNLSENGYNVYALDFLGYGNSDRYPEMKSPSN CCCEEEEECCCCCCEEEEEEEECCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCH KIVGRAAEVSLDVEKAVDFILKETGKSKIYLIGHSWGGSVAALYASKIPDNVEKLVLFAA HHCCCHHHEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHH ITARNENTEFEKISNSFEEMTPQQRISAMKSLTPVNRECQLEPEIFESWGEIWKKSDPLT EECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCE LKSENVTVRFPSGPSADVQDLLHNNSYYDPKKITVKTMIIRGEWDKYPDNNDAEGLFVSL EECCCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEE ENAASKKYVVIQKGTHVMHLEKSRNDLYNETLSFLKDNKNTLEDKEHDIAVIFEVIPNTA ECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC YKQNYLDIALSLKPELEKIEGFISIERFQSISNPEKILSLSFWKNEKAIEKWRNLESHRN HHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHCHHHHCC AQSNGRDFIFKDYHLRIANVVRDYGMFDRNETPNDSKRVNK CCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA