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The map label for this gene is ydfF [H]

Identifier: 146300698

GI number: 146300698

Start: 3494851

End: 3495525

Strand: Reverse

Name: ydfF [H]

Synonym: Fjoh_2949

Alternate gene names: 146300698

Gene position: 3495525-3494851 (Counterclockwise)

Preceding gene: 146300700

Following gene: 146300697

Centisome position: 57.33

GC content: 32.74

Gene sequence:

>675_bases
ATGAATAATGAAATTAGCAGAATAAGTACAATAATAGGTGACCCGGTGAGATCAGTAATTTTATGGACACTATTAGATAA
TAGGGCGTATACGGCAATTGAACTTGCTAATGTTGTTGAAACATCACCGCAAAATATCAGCATTCATTTATCTAAACTAG
TAAATGCTGACTTACTGACTGTTGAAAGCCAGGGAAGACACAAATACTACAAGTTATTAAATCCCGAAATTGCTGGTGTC
ATTGAAGGAATTGCAAATTTAGTTCCCAAAGAAAGACAAAAAAATGTGACGGATAATAATTCTGGAATTAAATATTGCAG
AACCTGTTATGACCATTTAGCAGGAAAAATTGGTGTAGAAATTACAGCGAAATTAATAGATAAAAAATATATTGTATTAG
ATAATAAGGCTTTTTTAGTGACAGAAGAAGGGAAAAATTTTTTCAACAATCTGGGAATAGATCTTGAAGCATTAAAAAAA
CAAAAAAGAATTTTCGCAAAGCCCTGTCTTGATTGGAGTGAACGAAAACATCATTTATCGGGTTCATTGGCGGCAGCACT
TTTAAACAAAATGTTTGAGATGGACTGGATCAGAAGAATAGATAATTCCAGAGCTGTATCGATAACAGCAAACGGACAAA
AAGCGTTATATGATAAGTTGAAGTTAATCGTATAA

Upstream 100 bases:

>100_bases
CACATGCAGAATAGTATTTTTTTTCATTGTATTTTTTTTACAAAAATAAAATTGGAATAACTTTGACAGTTAAATAGAAA
CTTAACTATGATTGCAGGGT

Downstream 100 bases:

>100_bases
TTTTAATTTAAAACTTTTTAAAAAGAAGGAAAAAACTTATATTTTATTTACTTTTGCAAAGTATTAAACCAATGTAAGTT
TATCAATGAATACTCAAAAA

Product: regulatory protein ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNNEISRISTIIGDPVRSVILWTLLDNRAYTAIELANVVETSPQNISIHLSKLVNADLLTVESQGRHKYYKLLNPEIAGV
IEGIANLVPKERQKNVTDNNSGIKYCRTCYDHLAGKIGVEITAKLIDKKYIVLDNKAFLVTEEGKNFFNNLGIDLEALKK
QKRIFAKPCLDWSERKHHLSGSLAAALLNKMFEMDWIRRIDNSRAVSITANGQKALYDKLKLIV

Sequences:

>Translated_224_residues
MNNEISRISTIIGDPVRSVILWTLLDNRAYTAIELANVVETSPQNISIHLSKLVNADLLTVESQGRHKYYKLLNPEIAGV
IEGIANLVPKERQKNVTDNNSGIKYCRTCYDHLAGKIGVEITAKLIDKKYIVLDNKAFLVTEEGKNFFNNLGIDLEALKK
QKRIFAKPCLDWSERKHHLSGSLAAALLNKMFEMDWIRRIDNSRAVSITANGQKALYDKLKLIV
>Mature_224_residues
MNNEISRISTIIGDPVRSVILWTLLDNRAYTAIELANVVETSPQNISIHLSKLVNADLLTVESQGRHKYYKLLNPEIAGV
IEGIANLVPKERQKNVTDNNSGIKYCRTCYDHLAGKIGVEITAKLIDKKYIVLDNKAFLVTEEGKNFFNNLGIDLEALKK
QKRIFAKPCLDWSERKHHLSGSLAAALLNKMFEMDWIRRIDNSRAVSITANGQKALYDKLKLIV

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 25292; Mature: 25292

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEISRISTIIGDPVRSVILWTLLDNRAYTAIELANVVETSPQNISIHLSKLVNADLLT
CCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCEEE
VESQGRHKYYKLLNPEIAGVIEGIANLVPKERQKNVTDNNSGIKYCRTCYDHLAGKIGVE
EECCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ITAKLIDKKYIVLDNKAFLVTEEGKNFFNNLGIDLEALKKQKRIFAKPCLDWSERKHHLS
HHHHHHCCEEEEEECCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GSLAAALLNKMFEMDWIRRIDNSRAVSITANGQKALYDKLKLIV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MNNEISRISTIIGDPVRSVILWTLLDNRAYTAIELANVVETSPQNISIHLSKLVNADLLT
CCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCEEE
VESQGRHKYYKLLNPEIAGVIEGIANLVPKERQKNVTDNNSGIKYCRTCYDHLAGKIGVE
EECCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ITAKLIDKKYIVLDNKAFLVTEEGKNFFNNLGIDLEALKKQKRIFAKPCLDWSERKHHLS
HHHHHHCCEEEEEECCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GSLAAALLNKMFEMDWIRRIDNSRAVSITANGQKALYDKLKLIV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]