| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300669
Identifier: 146300669
GI number: 146300669
Start: 3461980
End: 3462999
Strand: Direct
Name: 146300669
Synonym: Fjoh_2920
Alternate gene names: NA
Gene position: 3461980-3462999 (Clockwise)
Preceding gene: 146300668
Following gene: 146300670
Centisome position: 56.78
GC content: 31.27
Gene sequence:
>1020_bases TTGGATAAAATAGCAGTTGTCATTTTAAATTGGAACGGAGTAAAATTGTTAGAACAATTTTTACCGTCTGTTCTGCAATA TTCAGAAGAAGCTACGATTTATGTTGCCGATAATGCATCAACAGATGCTTCTGTAAATTTTGTTAAAGAAAATTATCCGT CGGTAAAAATCATTCAAAACACTGGAAATTACGGTTTTGCAAAAGGATATAATGATGCGCTTCAAAATGTAGAAGCAGAA ATTTATGCCTTAGTAAATTCTGACATAGAAGTTACTGAGAACTGGCTGAAACCAATTATCGAAACTTTTGATAAAGAAAA ACAAACCGCCATTATCCAGCCAAAAATTCTTGATTTTAAAAACAAGGAATATTTTGAATATGCCGGAGCAGCCGGAGGTT TTATTGATAAATATGGTTTTCCATTTTGCAGGGGAAGAATCTTTGAAACATTAGAAAAAGACAACGGACAGTATAATGAC GATTGTGAATTATTCTGGGCATCCGGGGCTTGTTTCTTTATTAGAAAAGAAGTTTACCATGAATTAAAAGGTTTTGATGA AACTTTCTTTGCACATCAGGAAGAGATTGATTTATGCTGGCGTGCAGCAAATGAAGGACACATTATAAAGTACAATTCAA AGTCGGTGGTTTACCATGTCGGCGGTGCTACATTGCAGCAAGGGAATCCCAAAAAGACGTATTTAAATTTTAGAAATTCG TTGTTAATGCTTGTCAAAAACCTACCAAAAAAAGGATTATTTTTTGTGATTTTTTTCAGAATGGTTTTAGATGGAATTGC TGGTATCCGTTTTCTTACACAAGGAAAATTTAGTCATACAATTGCAATTTTAAAAGCACATTTTTCATTTTATTGTATAT CTTTAAAATATCTAAGAGAACGAAAAGATTTTCAAATACAGCAATACTATACTGTAAAAAGTATCGTTTTCCTGTATTAT ATTAAGAAAATAAGGGTTTTTAAAGAAATCTTTAACACTAATCAAAATATTAAAAACTAA
Upstream 100 bases:
>100_bases TGAATCATTTTTACTGTCAAATGGATTTTGAAAACGAAAAATATCAGTTTTTGCAGAGTCTGCCCGATTATACTATTATT AAATAAATTAAAGAATACTT
Downstream 100 bases:
>100_bases ATTTGTAATCAACGTTTAATTAAATATAATACCTATGAGAAAAATAGTTATCGCACTATCAGTATTAATGGCCTTAACTT CGTGTGTATCGAAAAAGGAA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Domain-Containing Protein; Rhamnosyl Transferase; Group 2 Family Glycosyltransferase; B-Glycosyltransferase; Rhamnosyl Transferase RfbQ; Glycosyl Transferase GT2 Family Protein; Rhamnosyltransferase; Family 2 Glycosyltransferase; Glycosyltransferase/Rhamnosyltransferase; Glycosyl Transferase GT2 Family; Glycosyltransferase-Like Protein; Rhamnosyl Transferase Related Protein; Capsule-Related Glycosyltransferase
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MDKIAVVILNWNGVKLLEQFLPSVLQYSEEATIYVADNASTDASVNFVKENYPSVKIIQNTGNYGFAKGYNDALQNVEAE IYALVNSDIEVTENWLKPIIETFDKEKQTAIIQPKILDFKNKEYFEYAGAAGGFIDKYGFPFCRGRIFETLEKDNGQYND DCELFWASGACFFIRKEVYHELKGFDETFFAHQEEIDLCWRAANEGHIIKYNSKSVVYHVGGATLQQGNPKKTYLNFRNS LLMLVKNLPKKGLFFVIFFRMVLDGIAGIRFLTQGKFSHTIAILKAHFSFYCISLKYLRERKDFQIQQYYTVKSIVFLYY IKKIRVFKEIFNTNQNIKN
Sequences:
>Translated_339_residues MDKIAVVILNWNGVKLLEQFLPSVLQYSEEATIYVADNASTDASVNFVKENYPSVKIIQNTGNYGFAKGYNDALQNVEAE IYALVNSDIEVTENWLKPIIETFDKEKQTAIIQPKILDFKNKEYFEYAGAAGGFIDKYGFPFCRGRIFETLEKDNGQYND DCELFWASGACFFIRKEVYHELKGFDETFFAHQEEIDLCWRAANEGHIIKYNSKSVVYHVGGATLQQGNPKKTYLNFRNS LLMLVKNLPKKGLFFVIFFRMVLDGIAGIRFLTQGKFSHTIAILKAHFSFYCISLKYLRERKDFQIQQYYTVKSIVFLYY IKKIRVFKEIFNTNQNIKN >Mature_339_residues MDKIAVVILNWNGVKLLEQFLPSVLQYSEEATIYVADNASTDASVNFVKENYPSVKIIQNTGNYGFAKGYNDALQNVEAE IYALVNSDIEVTENWLKPIIETFDKEKQTAIIQPKILDFKNKEYFEYAGAAGGFIDKYGFPFCRGRIFETLEKDNGQYND DCELFWASGACFFIRKEVYHELKGFDETFFAHQEEIDLCWRAANEGHIIKYNSKSVVYHVGGATLQQGNPKKTYLNFRNS LLMLVKNLPKKGLFFVIFFRMVLDGIAGIRFLTQGKFSHTIAILKAHFSFYCISLKYLRERKDFQIQQYYTVKSIVFLYY IKKIRVFKEIFNTNQNIKN
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39357; Mature: 39357
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIAVVILNWNGVKLLEQFLPSVLQYSEEATIYVADNASTDASVNFVKENYPSVKIIQN CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHCCCCCEEEEEE TGNYGFAKGYNDALQNVEAEIYALVNSDIEVTENWLKPIIETFDKEKQTAIIQPKILDFK CCCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCEECCC NKEYFEYAGAAGGFIDKYGFPFCRGRIFETLEKDNGQYNDDCELFWASGACFFIRKEVYH CCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEHHHHHHH ELKGFDETFFAHQEEIDLCWRAANEGHIIKYNSKSVVYHVGGATLQQGNPKKTYLNFRNS HHCCCCHHHHCCHHHHHHHHCCCCCCCEEEECCCEEEEEECCCEECCCCCHHHHHHHHHH LLMLVKNLPKKGLFFVIFFRMVLDGIAGIRFLTQGKFSHTIAILKAHFSFYCISLKYLRE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEHHHHHHC RKDFQIQQYYTVKSIVFLYYIKKIRVFKEIFNTNQNIKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDKIAVVILNWNGVKLLEQFLPSVLQYSEEATIYVADNASTDASVNFVKENYPSVKIIQN CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHCCCCCEEEEEE TGNYGFAKGYNDALQNVEAEIYALVNSDIEVTENWLKPIIETFDKEKQTAIIQPKILDFK CCCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCEECCC NKEYFEYAGAAGGFIDKYGFPFCRGRIFETLEKDNGQYNDDCELFWASGACFFIRKEVYH CCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEHHHHHHH ELKGFDETFFAHQEEIDLCWRAANEGHIIKYNSKSVVYHVGGATLQQGNPKKTYLNFRNS HHCCCCHHHHCCHHHHHHHHCCCCCCCEEEECCCEEEEEECCCEECCCCCHHHHHHHHHH LLMLVKNLPKKGLFFVIFFRMVLDGIAGIRFLTQGKFSHTIAILKAHFSFYCISLKYLRE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEHHHHHHC RKDFQIQQYYTVKSIVFLYYIKKIRVFKEIFNTNQNIKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA