| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300660
Identifier: 146300660
GI number: 146300660
Start: 3453447
End: 3454106
Strand: Direct
Name: 146300660
Synonym: Fjoh_2911
Alternate gene names: NA
Gene position: 3453447-3454106 (Clockwise)
Preceding gene: 146300659
Following gene: 146300662
Centisome position: 56.64
GC content: 33.33
Gene sequence:
>660_bases ATGAACAAAACCAATAGAATTTTCTTCCATGATAATCCATATCCGTTAGGACATACTTTAGAAGAATTTGTTTGGAGTGC AAGAGTCGACCCGGAAAGAGGATTATTATTTGATTTTCATTTAAGGACAGATTCATATTATGCCGAAGATGATTGTGATG ATGAAGAAGAGGCAGAATCTGACTGGAAATCTAAAACTGTTTGGGAAAATTACCATAATTGTATATTATCGTCAACTGAA TGGCATTCTGGCGGAATCGTAATGGGAACTCCCGAAAATAAATTTGATTTTTCTAAATTCAATCACGAAACCCTTACTGC TAATAAATTACCGTTAGGAGATAATTTTGATTTTCAGGATTTAGCTTTTTACATCTATTTATTAGGACACGACAGCTGCT GTGATCATGAAATAGTTCTAAACAGAAACGCTGATAATACTTTTGAAATTTCCTGGACAGGAAAAATTGCCCGAACGTAT TATGGAGATTATGAATTCAAACAAAGCTTTGAAGCCAATATCAGCAAAGTAAAATTTGACGGAATATATTTTTGTTACGG TCTTAGTGAAGAAGAAAATTGGAAAATCCTCCAAAACTGCACAGTAGACCCAAGTATTTTTAGAGTATCAGGTGAAAAAT TTGAGGTCCTTAATTATTAG
Upstream 100 bases:
>100_bases CAGCTAAGAATCAAGAAATTATATTAAAAGTAGTAAACTACGAAAAGAAAGCTGTTTTAGAAGAAATCATTAAAAAATAA TCTCTATTCATTTTTGACTC
Downstream 100 bases:
>100_bases AATAAAAAAGAACCTCTAATCATTTACCATTCAATTTGTTTTAATCCTTTTGATTTCAAGAAATCATTTGTCTGGCTGAA ATGTTTGTTTCCAAACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAESDWKSKTVWENYHNCILSSTE WHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQDLAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTY YGDYEFKQSFEANISKVKFDGIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY
Sequences:
>Translated_219_residues MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAESDWKSKTVWENYHNCILSSTE WHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQDLAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTY YGDYEFKQSFEANISKVKFDGIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY >Mature_219_residues MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAESDWKSKTVWENYHNCILSSTE WHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQDLAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTY YGDYEFKQSFEANISKVKFDGIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25763; Mature: 25763
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAES CCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHH DWKSKTVWENYHNCILSSTEWHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQD HHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHH LAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTYYGDYEFKQSFEANISKVKFD EEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHCCCEEEEEC GIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY CEEEEEECCCCCCCEEEECCCCCCCEEEECCCEEEEECC >Mature Secondary Structure MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAES CCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHH DWKSKTVWENYHNCILSSTEWHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQD HHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHH LAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTYYGDYEFKQSFEANISKVKFD EEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHCCCEEEEEC GIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY CEEEEEECCCCCCCEEEECCCCCCCEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA