Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300660

Identifier: 146300660

GI number: 146300660

Start: 3453447

End: 3454106

Strand: Direct

Name: 146300660

Synonym: Fjoh_2911

Alternate gene names: NA

Gene position: 3453447-3454106 (Clockwise)

Preceding gene: 146300659

Following gene: 146300662

Centisome position: 56.64

GC content: 33.33

Gene sequence:

>660_bases
ATGAACAAAACCAATAGAATTTTCTTCCATGATAATCCATATCCGTTAGGACATACTTTAGAAGAATTTGTTTGGAGTGC
AAGAGTCGACCCGGAAAGAGGATTATTATTTGATTTTCATTTAAGGACAGATTCATATTATGCCGAAGATGATTGTGATG
ATGAAGAAGAGGCAGAATCTGACTGGAAATCTAAAACTGTTTGGGAAAATTACCATAATTGTATATTATCGTCAACTGAA
TGGCATTCTGGCGGAATCGTAATGGGAACTCCCGAAAATAAATTTGATTTTTCTAAATTCAATCACGAAACCCTTACTGC
TAATAAATTACCGTTAGGAGATAATTTTGATTTTCAGGATTTAGCTTTTTACATCTATTTATTAGGACACGACAGCTGCT
GTGATCATGAAATAGTTCTAAACAGAAACGCTGATAATACTTTTGAAATTTCCTGGACAGGAAAAATTGCCCGAACGTAT
TATGGAGATTATGAATTCAAACAAAGCTTTGAAGCCAATATCAGCAAAGTAAAATTTGACGGAATATATTTTTGTTACGG
TCTTAGTGAAGAAGAAAATTGGAAAATCCTCCAAAACTGCACAGTAGACCCAAGTATTTTTAGAGTATCAGGTGAAAAAT
TTGAGGTCCTTAATTATTAG

Upstream 100 bases:

>100_bases
CAGCTAAGAATCAAGAAATTATATTAAAAGTAGTAAACTACGAAAAGAAAGCTGTTTTAGAAGAAATCATTAAAAAATAA
TCTCTATTCATTTTTGACTC

Downstream 100 bases:

>100_bases
AATAAAAAAGAACCTCTAATCATTTACCATTCAATTTGTTTTAATCCTTTTGATTTCAAGAAATCATTTGTCTGGCTGAA
ATGTTTGTTTCCAAACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAESDWKSKTVWENYHNCILSSTE
WHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQDLAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTY
YGDYEFKQSFEANISKVKFDGIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY

Sequences:

>Translated_219_residues
MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAESDWKSKTVWENYHNCILSSTE
WHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQDLAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTY
YGDYEFKQSFEANISKVKFDGIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY
>Mature_219_residues
MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAESDWKSKTVWENYHNCILSSTE
WHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQDLAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTY
YGDYEFKQSFEANISKVKFDGIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25763; Mature: 25763

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAES
CCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHH
DWKSKTVWENYHNCILSSTEWHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQD
HHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHH
LAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTYYGDYEFKQSFEANISKVKFD
EEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHCCCEEEEEC
GIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY
CEEEEEECCCCCCCEEEECCCCCCCEEEECCCEEEEECC
>Mature Secondary Structure
MNKTNRIFFHDNPYPLGHTLEEFVWSARVDPERGLLFDFHLRTDSYYAEDDCDDEEEAES
CCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHH
DWKSKTVWENYHNCILSSTEWHSGGIVMGTPENKFDFSKFNHETLTANKLPLGDNFDFQD
HHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHH
LAFYIYLLGHDSCCDHEIVLNRNADNTFEISWTGKIARTYYGDYEFKQSFEANISKVKFD
EEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHCCCEEEEEC
GIYFCYGLSEEENWKILQNCTVDPSIFRVSGEKFEVLNY
CEEEEEECCCCCCCEEEECCCCCCCEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA