| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300637
Identifier: 146300637
GI number: 146300637
Start: 3426604
End: 3428631
Strand: Reverse
Name: 146300637
Synonym: Fjoh_2888
Alternate gene names: NA
Gene position: 3428631-3426604 (Counterclockwise)
Preceding gene: 146300638
Following gene: 146300636
Centisome position: 56.24
GC content: 31.36
Gene sequence:
>2028_bases ATGACTACAAACACGATTTTATTATTATTACTTTCTTTAGTAATAGCGGGTGGTTTGTCGTACTTTCAATACTTTTATAA AGCCAAAAACAAATCAAATCTGATTTGGTTTTTGGCTTTTTTACGTTTTCTGGTCATTTTTGGATTGTTGGTTTTATTGA TAAATCCGATAATTTCTAAAAGTTCGCTTCAAATTACCAAAACACCTTTGGCAATTGCCGTAGATAATTCAAGTTCAATC GCTGCTTTAAAATCAGATAAAAAAGCCCTTGAATTATACCAAAAATTAATATCCAATCCAGCTTTAAAAGAAAAATTCGA AATTCAGTCTTATCAATTTGATGATGAATTTAAAACATCAGATAAATTTGATTTTAAAGGAAACCAGACTAATCTGGACG AAGCTGCCAAGAATTTAAAAAGCATCAACAAAAACCTGACTTTCCCAACGGTTATTATTACTGATGGAAATCAAACTACA GGAAACGACTACGTTTATAGATTCGATCCTGCTAATAAAGTTTATCCTTTGGTTGTGGGAGACACAACCACGTTTTTTGA TTTAAAAATAAATCAGCTGAACGTAAATAAATACGCTTTTCATAAAAATAAATTTCCCGTAGAAGTTTTTCTACAATATG CAGGAGACAAACCAGTAACGGCAGATTTTACAATTTCACAGGGAAATTCTGTTGTGGCAAAAGAAAAAGTTTCTTTTTCA TCGTCTAAAAAAACAGCCTCTTTAAATTTACTTTTGCCGGCTGATAAGGTTGGACTGCAAATTTTTAGAGCCAATATATC TTCAAACGCAAAAGAGAAAAACAGTTACAATAACATCAAAAATTTTGCTGTAGAAATAATCGATCAAAAATCTACAATTG CCATTGTTTCTTCTATAAATCATCCAGATATCGCAGCTTTAAAACGTGCGGTAGAAGTTAATGCACAGCGTAAAGTAATA TTGGTTAAGCCAAACGATATTAGTCAGTTACAGGAAGCTTCGGTTTTGGTTTTATATCAGCCAAATTCATCCTTCAAACA GGTTTTTGATAACAATAAAGCAGCAGGAAGAAACACTTTTATTATAACCGGAAACAGCACTGATTTTAATTTCCTGAATC AGCAGCAAAACAATCTGGTTTTCAAAATGAGCGGACAAGTCGAAGATTATTTGTCTGAATTTCAATCGCAGTTTAATTTA TTTGCTATAGATAATATCGGATTTGAAAATTTCCCGCCTTTGCAGAATTTATTCGGAACAATTTCAACAAACGGAAATGT TTCAGTTTTACTTTCTTCAAAAATTAGAAATGTTTCTACAAATGCGCCTTTATTGGCTTTTGCCGAAAACCAGGGAAAAC GAACAGCTTTTCTTTTAGGAGAAAACAGCTGGAAATGGCGCTTACAGAGTCATATCGATAATCAGTTGTTTGAGAAATAC GATGTTTTTGTAGACAAAGTAATCCAATATTTAGCAACTTCGGCTTCAAAAAAATCTTTGGTTGTAACACACGAAAACTT TTATAATTCTGGAGAAGATATTGTAATCAATGCGCAGTATTTCAATAAAAATTATGAGTTTGATGAAAAGGCAAGATTAA CAATTACGGTTACAAATGCCGAAACCAAACAAGCAAAAAACTACGACTTATTAAAAGGAAATAATTCTTTCTCTGTAAAT TTAGAAGGGTTAACAGCAGGGAAATACAATTTTACAGTAAAAGAATTAAATTCGAACACTTCATATTCTAGTCATTTCGA AATTTTAGATTTTGATATCGAAAAGCAATTTGTAAATCCTGATGTTTTAAAATTGAAACAATTGGCCTTACAAACCAATG GGAAAGCCTTTTTTGAAAACGAGGAAGAAGATTTGATTAATACACTTTTAGAGAATAAAGAATACAAATCAATCGAAAAA AATGTATCAACCAAAACTCCAATTATAGACTGGGTTTGGTTATTGATTTTAATTGCCGCTTTATTAACGACAGAATGGTT TGTTAGAAAGTATAATGGATTGTTGTGA
Upstream 100 bases:
>100_bases GTGGAGGAATGCTTACCTAATATGTTACTTGTTTGTGGTTTGTTGTTTATTGTTCTGCAGCCAAAAACTATAAACTAAAA ACTATAAACCCAAATTAAAT
Downstream 100 bases:
>100_bases TAAATATAATTGAATTCCTTCTGACATTTTGTAATCTTGTGATTGTAATTTAAAGTATAAAATTATGAAAGTTAAATTCT TTTTTATCGCAGCAATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 675; Mature: 674
Protein sequence:
>675_residues MTTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISKSSLQITKTPLAIAVDNSSSI AALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTSDKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTT GNDYVYRFDPANKVYPLVVGDTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSINHPDIAALKRAVEVNAQRKVI LVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTFIITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNL FAIDNIGFENFPPLQNLFGTISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNAETKQAKNYDLLKGNNSFSVN LEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNPDVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEK NVSTKTPIIDWVWLLILIAALLTTEWFVRKYNGLL
Sequences:
>Translated_675_residues MTTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISKSSLQITKTPLAIAVDNSSSI AALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTSDKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTT GNDYVYRFDPANKVYPLVVGDTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSINHPDIAALKRAVEVNAQRKVI LVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTFIITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNL FAIDNIGFENFPPLQNLFGTISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNAETKQAKNYDLLKGNNSFSVN LEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNPDVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEK NVSTKTPIIDWVWLLILIAALLTTEWFVRKYNGLL >Mature_674_residues TTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISKSSLQITKTPLAIAVDNSSSIA ALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTSDKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTTG NDYVYRFDPANKVYPLVVGDTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFSS SKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSINHPDIAALKRAVEVNAQRKVIL VKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTFIITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNLF AIDNIGFENFPPLQNLFGTISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKYD VFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNAETKQAKNYDLLKGNNSFSVNL EGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNPDVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEKN VSTKTPIIDWVWLLILIAALLTTEWFVRKYNGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76321; Mature: 76189
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISK CCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SSLQITKTPLAIAVDNSSSIAALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTS CCCEEEECCEEEEECCCCCEEEHHCCHHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCC DKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTTGNDYVYRFDPANKVYPLVVG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEC DTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS CCEEEEEEEEEEEECCEEEEECCCCCHHHEEEECCCCCCEEEEEECCCCEEEEEEECCCC SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSIN CCCCCEEEEEEECCHHHCEEEEEECCCCCCHHHCCHHHHHHHHHHEECCCCEEEEEECCC HPDIAALKRAVEVNAQRKVILVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTF CCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCEEE IITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNLFAIDNIGFENFPPLQNLFGT EEECCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEE ISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY EECCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEHHHHHHHHHHHH DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNA HHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECC ETKQAKNYDLLKGNNSFSVNLEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNP CCCCCCCCEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEHHHHHCCC DVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEKNVSTKTPIIDWVWLLILIAA HHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH LLTTEWFVRKYNGLL HHHHHHHHHHHCCCC >Mature Secondary Structure TTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISK CCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SSLQITKTPLAIAVDNSSSIAALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTS CCCEEEECCEEEEECCCCCEEEHHCCHHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCC DKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTTGNDYVYRFDPANKVYPLVVG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEC DTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS CCEEEEEEEEEEEECCEEEEECCCCCHHHEEEECCCCCCEEEEEECCCCEEEEEEECCCC SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSIN CCCCCEEEEEEECCHHHCEEEEEECCCCCCHHHCCHHHHHHHHHHEECCCCEEEEEECCC HPDIAALKRAVEVNAQRKVILVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTF CCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCEEE IITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNLFAIDNIGFENFPPLQNLFGT EEECCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEE ISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY EECCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEHHHHHHHHHHHH DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNA HHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECC ETKQAKNYDLLKGNNSFSVNLEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNP CCCCCCCCEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEHHHHHCCC DVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEKNVSTKTPIIDWVWLLILIAA HHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH LLTTEWFVRKYNGLL HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA