Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300637

Identifier: 146300637

GI number: 146300637

Start: 3426604

End: 3428631

Strand: Reverse

Name: 146300637

Synonym: Fjoh_2888

Alternate gene names: NA

Gene position: 3428631-3426604 (Counterclockwise)

Preceding gene: 146300638

Following gene: 146300636

Centisome position: 56.24

GC content: 31.36

Gene sequence:

>2028_bases
ATGACTACAAACACGATTTTATTATTATTACTTTCTTTAGTAATAGCGGGTGGTTTGTCGTACTTTCAATACTTTTATAA
AGCCAAAAACAAATCAAATCTGATTTGGTTTTTGGCTTTTTTACGTTTTCTGGTCATTTTTGGATTGTTGGTTTTATTGA
TAAATCCGATAATTTCTAAAAGTTCGCTTCAAATTACCAAAACACCTTTGGCAATTGCCGTAGATAATTCAAGTTCAATC
GCTGCTTTAAAATCAGATAAAAAAGCCCTTGAATTATACCAAAAATTAATATCCAATCCAGCTTTAAAAGAAAAATTCGA
AATTCAGTCTTATCAATTTGATGATGAATTTAAAACATCAGATAAATTTGATTTTAAAGGAAACCAGACTAATCTGGACG
AAGCTGCCAAGAATTTAAAAAGCATCAACAAAAACCTGACTTTCCCAACGGTTATTATTACTGATGGAAATCAAACTACA
GGAAACGACTACGTTTATAGATTCGATCCTGCTAATAAAGTTTATCCTTTGGTTGTGGGAGACACAACCACGTTTTTTGA
TTTAAAAATAAATCAGCTGAACGTAAATAAATACGCTTTTCATAAAAATAAATTTCCCGTAGAAGTTTTTCTACAATATG
CAGGAGACAAACCAGTAACGGCAGATTTTACAATTTCACAGGGAAATTCTGTTGTGGCAAAAGAAAAAGTTTCTTTTTCA
TCGTCTAAAAAAACAGCCTCTTTAAATTTACTTTTGCCGGCTGATAAGGTTGGACTGCAAATTTTTAGAGCCAATATATC
TTCAAACGCAAAAGAGAAAAACAGTTACAATAACATCAAAAATTTTGCTGTAGAAATAATCGATCAAAAATCTACAATTG
CCATTGTTTCTTCTATAAATCATCCAGATATCGCAGCTTTAAAACGTGCGGTAGAAGTTAATGCACAGCGTAAAGTAATA
TTGGTTAAGCCAAACGATATTAGTCAGTTACAGGAAGCTTCGGTTTTGGTTTTATATCAGCCAAATTCATCCTTCAAACA
GGTTTTTGATAACAATAAAGCAGCAGGAAGAAACACTTTTATTATAACCGGAAACAGCACTGATTTTAATTTCCTGAATC
AGCAGCAAAACAATCTGGTTTTCAAAATGAGCGGACAAGTCGAAGATTATTTGTCTGAATTTCAATCGCAGTTTAATTTA
TTTGCTATAGATAATATCGGATTTGAAAATTTCCCGCCTTTGCAGAATTTATTCGGAACAATTTCAACAAACGGAAATGT
TTCAGTTTTACTTTCTTCAAAAATTAGAAATGTTTCTACAAATGCGCCTTTATTGGCTTTTGCCGAAAACCAGGGAAAAC
GAACAGCTTTTCTTTTAGGAGAAAACAGCTGGAAATGGCGCTTACAGAGTCATATCGATAATCAGTTGTTTGAGAAATAC
GATGTTTTTGTAGACAAAGTAATCCAATATTTAGCAACTTCGGCTTCAAAAAAATCTTTGGTTGTAACACACGAAAACTT
TTATAATTCTGGAGAAGATATTGTAATCAATGCGCAGTATTTCAATAAAAATTATGAGTTTGATGAAAAGGCAAGATTAA
CAATTACGGTTACAAATGCCGAAACCAAACAAGCAAAAAACTACGACTTATTAAAAGGAAATAATTCTTTCTCTGTAAAT
TTAGAAGGGTTAACAGCAGGGAAATACAATTTTACAGTAAAAGAATTAAATTCGAACACTTCATATTCTAGTCATTTCGA
AATTTTAGATTTTGATATCGAAAAGCAATTTGTAAATCCTGATGTTTTAAAATTGAAACAATTGGCCTTACAAACCAATG
GGAAAGCCTTTTTTGAAAACGAGGAAGAAGATTTGATTAATACACTTTTAGAGAATAAAGAATACAAATCAATCGAAAAA
AATGTATCAACCAAAACTCCAATTATAGACTGGGTTTGGTTATTGATTTTAATTGCCGCTTTATTAACGACAGAATGGTT
TGTTAGAAAGTATAATGGATTGTTGTGA

Upstream 100 bases:

>100_bases
GTGGAGGAATGCTTACCTAATATGTTACTTGTTTGTGGTTTGTTGTTTATTGTTCTGCAGCCAAAAACTATAAACTAAAA
ACTATAAACCCAAATTAAAT

Downstream 100 bases:

>100_bases
TAAATATAATTGAATTCCTTCTGACATTTTGTAATCTTGTGATTGTAATTTAAAGTATAAAATTATGAAAGTTAAATTCT
TTTTTATCGCAGCAATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 675; Mature: 674

Protein sequence:

>675_residues
MTTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISKSSLQITKTPLAIAVDNSSSI
AALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTSDKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTT
GNDYVYRFDPANKVYPLVVGDTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS
SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSINHPDIAALKRAVEVNAQRKVI
LVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTFIITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNL
FAIDNIGFENFPPLQNLFGTISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY
DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNAETKQAKNYDLLKGNNSFSVN
LEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNPDVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEK
NVSTKTPIIDWVWLLILIAALLTTEWFVRKYNGLL

Sequences:

>Translated_675_residues
MTTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISKSSLQITKTPLAIAVDNSSSI
AALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTSDKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTT
GNDYVYRFDPANKVYPLVVGDTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS
SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSINHPDIAALKRAVEVNAQRKVI
LVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTFIITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNL
FAIDNIGFENFPPLQNLFGTISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY
DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNAETKQAKNYDLLKGNNSFSVN
LEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNPDVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEK
NVSTKTPIIDWVWLLILIAALLTTEWFVRKYNGLL
>Mature_674_residues
TTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISKSSLQITKTPLAIAVDNSSSIA
ALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTSDKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTTG
NDYVYRFDPANKVYPLVVGDTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFSS
SKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSINHPDIAALKRAVEVNAQRKVIL
VKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTFIITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNLF
AIDNIGFENFPPLQNLFGTISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKYD
VFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNAETKQAKNYDLLKGNNSFSVNL
EGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNPDVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEKN
VSTKTPIIDWVWLLILIAALLTTEWFVRKYNGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76321; Mature: 76189

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
0.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISK
CCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SSLQITKTPLAIAVDNSSSIAALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTS
CCCEEEECCEEEEECCCCCEEEHHCCHHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCC
DKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTTGNDYVYRFDPANKVYPLVVG
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEC
DTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS
CCEEEEEEEEEEEECCEEEEECCCCCHHHEEEECCCCCCEEEEEECCCCEEEEEEECCCC
SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSIN
CCCCCEEEEEEECCHHHCEEEEEECCCCCCHHHCCHHHHHHHHHHEECCCCEEEEEECCC
HPDIAALKRAVEVNAQRKVILVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTF
CCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCEEE
IITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNLFAIDNIGFENFPPLQNLFGT
EEECCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEE
ISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY
EECCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEHHHHHHHHHHHH
DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNA
HHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECC
ETKQAKNYDLLKGNNSFSVNLEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNP
CCCCCCCCEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEHHHHHCCC
DVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEKNVSTKTPIIDWVWLLILIAA
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
LLTTEWFVRKYNGLL
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTNTILLLLLSLVIAGGLSYFQYFYKAKNKSNLIWFLAFLRFLVIFGLLVLLINPIISK
CCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SSLQITKTPLAIAVDNSSSIAALKSDKKALELYQKLISNPALKEKFEIQSYQFDDEFKTS
CCCEEEECCEEEEECCCCCEEEHHCCHHHHHHHHHHHCCCCHHHHHCCCCEECCCCCCCC
DKFDFKGNQTNLDEAAKNLKSINKNLTFPTVIITDGNQTTGNDYVYRFDPANKVYPLVVG
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEC
DTTTFFDLKINQLNVNKYAFHKNKFPVEVFLQYAGDKPVTADFTISQGNSVVAKEKVSFS
CCEEEEEEEEEEEECCEEEEECCCCCHHHEEEECCCCCCEEEEEECCCCEEEEEEECCCC
SSKKTASLNLLLPADKVGLQIFRANISSNAKEKNSYNNIKNFAVEIIDQKSTIAIVSSIN
CCCCCEEEEEEECCHHHCEEEEEECCCCCCHHHCCHHHHHHHHHHEECCCCEEEEEECCC
HPDIAALKRAVEVNAQRKVILVKPNDISQLQEASVLVLYQPNSSFKQVFDNNKAAGRNTF
CCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCEEE
IITGNSTDFNFLNQQQNNLVFKMSGQVEDYLSEFQSQFNLFAIDNIGFENFPPLQNLFGT
EEECCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEE
ISTNGNVSVLLSSKIRNVSTNAPLLAFAENQGKRTAFLLGENSWKWRLQSHIDNQLFEKY
EECCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEHHHHHHHHHHHH
DVFVDKVIQYLATSASKKSLVVTHENFYNSGEDIVINAQYFNKNYEFDEKARLTITVTNA
HHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECC
ETKQAKNYDLLKGNNSFSVNLEGLTAGKYNFTVKELNSNTSYSSHFEILDFDIEKQFVNP
CCCCCCCCEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEHHHHHCCC
DVLKLKQLALQTNGKAFFENEEEDLINTLLENKEYKSIEKNVSTKTPIIDWVWLLILIAA
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
LLTTEWFVRKYNGLL
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA