| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300632
Identifier: 146300632
GI number: 146300632
Start: 3421999
End: 3422949
Strand: Direct
Name: 146300632
Synonym: Fjoh_2883
Alternate gene names: NA
Gene position: 3421999-3422949 (Clockwise)
Preceding gene: 146300630
Following gene: 146300655
Centisome position: 56.13
GC content: 34.07
Gene sequence:
>951_bases ATGCGCCTTTTAATTTTAAATTTCTTTCTGTTTTTGAATGTTTTTTGTTTCGCTCAAGATGTTGATATCCAGCCTAAAAA TATTAGCGATACTATTTTAAACCCAAAAAGAATACTAAAAATTGCTGATCCGCTTGACGGCGTAAAAACAATGCAGAAAC TTTTTCCGGGAAAATTATACAATCTTGCAGATAAAAACACCTTTATAAGCTGGAAATGTAAATCTTGTAAAGCTTCACCT TTTCTAGATGTAAACGGTGTCGAAGGCGATCAGTTATTTCCTTACACAGAAGGCGTTGCAACCAGACTTCTTGCCAATAT AGATTATTCAGATTCAAAAGGAAATCAATTCAAGATATTAGCTTTTAATCATTCTGTTCATGATGAAGACGGTCTGCAAA CCGGACGCTTTTCCGGCGGACTTCTTAGTCTAGCTAAATTTGCTAAAAATGGAAGTTCTTGGGAAATGAGATCTTTTCAA CCTGCTGTTGCTGCTTTTGGTGCTTTTGCGCAATGCCCTACTCCTAAATTAGTTGAAATTGGTGAAGATCAATTTGCCTT TACATTGATGCATGCAAATGGCGGTGCCGGTGGTGCGTATGAAGGTTATCTTTACCTTGTTGCAGGTTTAGATGGTAAAT ACCAGCCTATTTTAGAAGCTGATAAATACCAGTTAACCAATTCTTCATTCATCTCCTGGTCAGGATCTTATACAGTTGTA AATGATAATGCTAAAAAACATTTTAGAGATATAATTATTAAAACTAAAGGATCTTACAACAAAACAGCGCGAGCTGAAGA TGATTTTGATGTTGATTTTCCTGTGGAAATAGCAGAAATGGCAAAAACAAAAAAAGCATTTAGTTTTGAGATCGAAAGAC GTTTTTCATTTAAAGGAAAATTCTATAAAATGATAGATAAACCTATTGTAAAATTTTCAAACGTAAAATAA
Upstream 100 bases:
>100_bases CTATTTTAACATTTTTAATTTTTGAGCCTTGAAAGTGATTTAAGTTCATATTAACAATCAATTTCTTTATATATTTGTTT CATTATATAAACACAATATT
Downstream 100 bases:
>100_bases ATCTAACTTAGGTAAATAATTGCTGTTAAACTTAAGCCGGCAATAAATATCCATAAAAATATCCCCTGCAATAAAGGCTT CACACCTACTGATTTTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MRLLILNFFLFLNVFCFAQDVDIQPKNISDTILNPKRILKIADPLDGVKTMQKLFPGKLYNLADKNTFISWKCKSCKASP FLDVNGVEGDQLFPYTEGVATRLLANIDYSDSKGNQFKILAFNHSVHDEDGLQTGRFSGGLLSLAKFAKNGSSWEMRSFQ PAVAAFGAFAQCPTPKLVEIGEDQFAFTLMHANGGAGGAYEGYLYLVAGLDGKYQPILEADKYQLTNSSFISWSGSYTVV NDNAKKHFRDIIIKTKGSYNKTARAEDDFDVDFPVEIAEMAKTKKAFSFEIERRFSFKGKFYKMIDKPIVKFSNVK
Sequences:
>Translated_316_residues MRLLILNFFLFLNVFCFAQDVDIQPKNISDTILNPKRILKIADPLDGVKTMQKLFPGKLYNLADKNTFISWKCKSCKASP FLDVNGVEGDQLFPYTEGVATRLLANIDYSDSKGNQFKILAFNHSVHDEDGLQTGRFSGGLLSLAKFAKNGSSWEMRSFQ PAVAAFGAFAQCPTPKLVEIGEDQFAFTLMHANGGAGGAYEGYLYLVAGLDGKYQPILEADKYQLTNSSFISWSGSYTVV NDNAKKHFRDIIIKTKGSYNKTARAEDDFDVDFPVEIAEMAKTKKAFSFEIERRFSFKGKFYKMIDKPIVKFSNVK >Mature_316_residues MRLLILNFFLFLNVFCFAQDVDIQPKNISDTILNPKRILKIADPLDGVKTMQKLFPGKLYNLADKNTFISWKCKSCKASP FLDVNGVEGDQLFPYTEGVATRLLANIDYSDSKGNQFKILAFNHSVHDEDGLQTGRFSGGLLSLAKFAKNGSSWEMRSFQ PAVAAFGAFAQCPTPKLVEIGEDQFAFTLMHANGGAGGAYEGYLYLVAGLDGKYQPILEADKYQLTNSSFISWSGSYTVV NDNAKKHFRDIIIKTKGSYNKTARAEDDFDVDFPVEIAEMAKTKKAFSFEIERRFSFKGKFYKMIDKPIVKFSNVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35440; Mature: 35440
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLILNFFLFLNVFCFAQDVDIQPKNISDTILNPKRILKIADPLDGVKTMQKLFPGKLY CEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHEEECCCCHHHHHHHHHCCCCEE NLADKNTFISWKCKSCKASPFLDVNGVEGDQLFPYTEGVATRLLANIDYSDSKGNQFKIL ECCCCCEEEEEEECCCCCCCCEECCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCEEEEE AFNHSVHDEDGLQTGRFSGGLLSLAKFAKNGSSWEMRSFQPAVAAFGAFAQCPTPKLVEI EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE GEDQFAFTLMHANGGAGGAYEGYLYLVAGLDGKYQPILEADKYQLTNSSFISWSGSYTVV CCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEECCCEEEE NDNAKKHFRDIIIKTKGSYNKTARAEDDFDVDFPVEIAEMAKTKKAFSFEIERRFSFKGK CCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCH FYKMIDKPIVKFSNVK HHHHHHHHHHHCCCCC >Mature Secondary Structure MRLLILNFFLFLNVFCFAQDVDIQPKNISDTILNPKRILKIADPLDGVKTMQKLFPGKLY CEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHEEECCCCHHHHHHHHHCCCCEE NLADKNTFISWKCKSCKASPFLDVNGVEGDQLFPYTEGVATRLLANIDYSDSKGNQFKIL ECCCCCEEEEEEECCCCCCCCEECCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCEEEEE AFNHSVHDEDGLQTGRFSGGLLSLAKFAKNGSSWEMRSFQPAVAAFGAFAQCPTPKLVEI EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE GEDQFAFTLMHANGGAGGAYEGYLYLVAGLDGKYQPILEADKYQLTNSSFISWSGSYTVV CCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEECCCEEEE NDNAKKHFRDIIIKTKGSYNKTARAEDDFDVDFPVEIAEMAKTKKAFSFEIERRFSFKGK CCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCH FYKMIDKPIVKFSNVK HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA