| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300615
Identifier: 146300615
GI number: 146300615
Start: 3401491
End: 3403035
Strand: Direct
Name: 146300615
Synonym: Fjoh_2866
Alternate gene names: NA
Gene position: 3401491-3403035 (Clockwise)
Preceding gene: 146300607
Following gene: 146300618
Centisome position: 55.79
GC content: 31.07
Gene sequence:
>1545_bases ATGGCTAACCATCAAAAAGATTTCTTATTTGTTCTGATAAAATCACTTTCCAAATCTGAAAAAAGGCAGTTTAAAATTTT TGCAAGCCGATTAGAGACCAGCTCGAATACGAAATTCATTGAACTATTCAACATTTTAGATAAGTCTGAAACGTATGATG AAAAGCTTATTTTAAAGAGCGGAAGCATCAAAAAAGTTCAGCTATCTAATTTAAAATCATACCTATACAAACAAATCTTA GTTAGTATTCGTTTAAATATTCCGAGCCAGAATATTCGTTATCAATTACGCGAACAAATTGATTTTGCTGTTATACTATA TAATAAAGGACTTTATAAACAGAGTTTAAAAATTCTTGACAAAACAAAACAGCAGGCTTTAGAAAATGACGAAAAATATA TGGCATATGAAATTGTCGAGTTCGAAAAGCTGATAGAATCACAATATATTACGAGAAGTATCCAAGGCCGTGCCGACGAA TTGGTTGTTCAGGCCAAAGAATTAAATTACCGAAATACTATTTCGAGCAAATTATCGAATCTTTCGCTTCAATTATACGG AATCATGCTGAAAACAGGTTACGTAAAAAGCGATGAGGAGTATAAATATATTGATGATTATTTCAATAAGCACATTGCCA AACTAGACGAAACTAAATTTGGTTTCCGTGAAAAGTATTGGTTTTACAATGCTAATTTATGGCGAAGCTTCTTAGTTCAG GACTTTTTAGCGAGTTATAAATTTGCTTACAAATGGGTACAGCTTTTTTATGACAACCCAAATATGATTTACCTGAATCC GGTATTTTTCTTAAAAGGAAACCATTATTTTCTGGAATCGCTTTATATGTTGAAATATACATCCAATTTCAAAAAATATC TTTCGCTGTTAGAAGAAACAATTCAGGATCCGAGATTTCCTGTAAATGATAATCTTGCTTCGCTGTCATTTTTATACTTA TACAATAACAAACTGAATCTGCATATTCTGGAAGGGACTTTTGCCGAAAGTGAATATCTGATTCCAGAGATTTTAGAAAA ACTGAAAGTACACAGCGACCACCTTGATGAACATCACGAAATGTTATTTTTCTACAAAATTGCTTCTATTTATTTTGGAA ATGAAAAGTATAACGAATGTATTTTCTATCTTGACAAAATCATCAATAATAAAAACTTAACTATGCGCGAAGATTTAATG TGCTTTGCAAGGCTATTGTCGCTGATTGCGCATTATGAACTAGGAAAAGATTATTATTTAGAAAATCACCTGAAAAGCAC GTATAAGTTTTTATTAAAAATGAATGACTTACACGAAGTTCAAAAAGAGATTATCAAGTTTTTAAGAAACCTGAATAACT TCTACCCTGCTGATATTAAAAAGGAATTCAAAAAAATGCATGCCCGTTTCGTAGAACTTGAAAAGAATACTTACGAAAAA AGAGCTTTCTTATACCTGGATATTATTTCGTGGCTGGAAAGCAAAATTGAAAATAGAAAAATTGCTGATATTATTAAGGA AAAGGCGAAATTGAATAGCCGATAA
Upstream 100 bases:
>100_bases GCAGTACGAAATTCATTTTAATGAAATTATACTGTTCATAACACAATTTATAACGAGTTAAATATTTAATAATCAATAAG TTATATTATTATTTTTTACA
Downstream 100 bases:
>100_bases ATCTTCCGATAAAAAAAACAAACTTCAATAAAAAAGCCTTGAATTTCAAGGCTTTTAGTCATTTCGACAAAACTGTACCA AAAACCAAACCCGACAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MANHQKDFLFVLIKSLSKSEKRQFKIFASRLETSSNTKFIELFNILDKSETYDEKLILKSGSIKKVQLSNLKSYLYKQIL VSIRLNIPSQNIRYQLREQIDFAVILYNKGLYKQSLKILDKTKQQALENDEKYMAYEIVEFEKLIESQYITRSIQGRADE LVVQAKELNYRNTISSKLSNLSLQLYGIMLKTGYVKSDEEYKYIDDYFNKHIAKLDETKFGFREKYWFYNANLWRSFLVQ DFLASYKFAYKWVQLFYDNPNMIYLNPVFFLKGNHYFLESLYMLKYTSNFKKYLSLLEETIQDPRFPVNDNLASLSFLYL YNNKLNLHILEGTFAESEYLIPEILEKLKVHSDHLDEHHEMLFFYKIASIYFGNEKYNECIFYLDKIINNKNLTMREDLM CFARLLSLIAHYELGKDYYLENHLKSTYKFLLKMNDLHEVQKEIIKFLRNLNNFYPADIKKEFKKMHARFVELEKNTYEK RAFLYLDIISWLESKIENRKIADIIKEKAKLNSR
Sequences:
>Translated_514_residues MANHQKDFLFVLIKSLSKSEKRQFKIFASRLETSSNTKFIELFNILDKSETYDEKLILKSGSIKKVQLSNLKSYLYKQIL VSIRLNIPSQNIRYQLREQIDFAVILYNKGLYKQSLKILDKTKQQALENDEKYMAYEIVEFEKLIESQYITRSIQGRADE LVVQAKELNYRNTISSKLSNLSLQLYGIMLKTGYVKSDEEYKYIDDYFNKHIAKLDETKFGFREKYWFYNANLWRSFLVQ DFLASYKFAYKWVQLFYDNPNMIYLNPVFFLKGNHYFLESLYMLKYTSNFKKYLSLLEETIQDPRFPVNDNLASLSFLYL YNNKLNLHILEGTFAESEYLIPEILEKLKVHSDHLDEHHEMLFFYKIASIYFGNEKYNECIFYLDKIINNKNLTMREDLM CFARLLSLIAHYELGKDYYLENHLKSTYKFLLKMNDLHEVQKEIIKFLRNLNNFYPADIKKEFKKMHARFVELEKNTYEK RAFLYLDIISWLESKIENRKIADIIKEKAKLNSR >Mature_513_residues ANHQKDFLFVLIKSLSKSEKRQFKIFASRLETSSNTKFIELFNILDKSETYDEKLILKSGSIKKVQLSNLKSYLYKQILV SIRLNIPSQNIRYQLREQIDFAVILYNKGLYKQSLKILDKTKQQALENDEKYMAYEIVEFEKLIESQYITRSIQGRADEL VVQAKELNYRNTISSKLSNLSLQLYGIMLKTGYVKSDEEYKYIDDYFNKHIAKLDETKFGFREKYWFYNANLWRSFLVQD FLASYKFAYKWVQLFYDNPNMIYLNPVFFLKGNHYFLESLYMLKYTSNFKKYLSLLEETIQDPRFPVNDNLASLSFLYLY NNKLNLHILEGTFAESEYLIPEILEKLKVHSDHLDEHHEMLFFYKIASIYFGNEKYNECIFYLDKIINNKNLTMREDLMC FARLLSLIAHYELGKDYYLENHLKSTYKFLLKMNDLHEVQKEIIKFLRNLNNFYPADIKKEFKKMHARFVELEKNTYEKR AFLYLDIISWLESKIENRKIADIIKEKAKLNSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61836; Mature: 61705
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANHQKDFLFVLIKSLSKSEKRQFKIFASRLETSSNTKFIELFNILDKSETYDEKLILKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEC GSIKKVQLSNLKSYLYKQILVSIRLNIPSQNIRYQLREQIDFAVILYNKGLYKQSLKILD CCCCEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH KTKQQALENDEKYMAYEIVEFEKLIESQYITRSIQGRADELVVQAKELNYRNTISSKLSN HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHC LSLQLYGIMLKTGYVKSDEEYKYIDDYFNKHIAKLDETKFGFREKYWFYNANLWRSFLVQ CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEECHHHHHHHHHH DFLASYKFAYKWVQLFYDNPNMIYLNPVFFLKGNHYFLESLYMLKYTSNFKKYLSLLEET HHHHHHHHHHHHHHEEECCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IQDPRFPVNDNLASLSFLYLYNNKLNLHILEGTFAESEYLIPEILEKLKVHSDHLDEHHE HHCCCCCCCCCHHHEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH MLFFYKIASIYFGNEKYNECIFYLDKIINNKNLTMREDLMCFARLLSLIAHYELGKDYYL HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH ENHLKSTYKFLLKMNDLHEVQKEIIKFLRNLNNFYPADIKKEFKKMHARFVELEKNTYEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH RAFLYLDIISWLESKIENRKIADIIKEKAKLNSR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure ANHQKDFLFVLIKSLSKSEKRQFKIFASRLETSSNTKFIELFNILDKSETYDEKLILKS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEC GSIKKVQLSNLKSYLYKQILVSIRLNIPSQNIRYQLREQIDFAVILYNKGLYKQSLKILD CCCCEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH KTKQQALENDEKYMAYEIVEFEKLIESQYITRSIQGRADELVVQAKELNYRNTISSKLSN HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHC LSLQLYGIMLKTGYVKSDEEYKYIDDYFNKHIAKLDETKFGFREKYWFYNANLWRSFLVQ CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEECHHHHHHHHHH DFLASYKFAYKWVQLFYDNPNMIYLNPVFFLKGNHYFLESLYMLKYTSNFKKYLSLLEET HHHHHHHHHHHHHHEEECCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH IQDPRFPVNDNLASLSFLYLYNNKLNLHILEGTFAESEYLIPEILEKLKVHSDHLDEHHE HHCCCCCCCCCHHHEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH MLFFYKIASIYFGNEKYNECIFYLDKIINNKNLTMREDLMCFARLLSLIAHYELGKDYYL HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH ENHLKSTYKFLLKMNDLHEVQKEIIKFLRNLNNFYPADIKKEFKKMHARFVELEKNTYEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH RAFLYLDIISWLESKIENRKIADIIKEKAKLNSR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA