| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300603
Identifier: 146300603
GI number: 146300603
Start: 3385226
End: 3385645
Strand: Direct
Name: 146300603
Synonym: Fjoh_2853
Alternate gene names: NA
Gene position: 3385226-3385645 (Clockwise)
Preceding gene: 146300601
Following gene: 146300605
Centisome position: 55.52
GC content: 30.71
Gene sequence:
>420_bases ATGAAAAAATTCACTTTACTATTAGCACTTATTTTTACGACAATTTCATTTGCTCAGACCATTACATCAAAAAAAGAAGA TGTGAGCCCGGCGCAGTATGATTTAATACAAAAAGTTAATCAATTTTATCCGGATATCACGGTAAACAAAACGATTACCA ATTTTTATGCAGATGGAACTATTATTGACTCTCAGCAGGAATTTGATTTATCCGGATCGAAATTTACAAGTTACAAACTA GGAATTGAACCTGATAATAAAAAGCTGTTATTTCAGTATGAATCTCCTGAAACCGGAAAAGTTTACGGAGACGTTTCAGT TTTTAAAGGAAATGTTTTGAGAACAACATTCTCTGATAAAACAAATCAGATTGAAGTTTCGCTTAACGGAAAATCCGTTT ATTTGAAAAAAATAAAATAA
Upstream 100 bases:
>100_bases ATTTAGTATCTTGTTAGGTATATTAATTATCCTTTATCAAAACTGGGTATTATACAAGCTTTCAAAAATGTTTTGAAACA ATAACTTAAAATTTAAATTT
Downstream 100 bases:
>100_bases TTTTTCAAATACGAGAAATTTAAAGCATCACATAATGTGATGCTTTTTTTATGAAGTATATTGTTTACTTGTTCTGAATC AGCTTTTCCAATTTATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKKFTLLLALIFTTISFAQTITSKKEDVSPAQYDLIQKVNQFYPDITVNKTITNFYADGTIIDSQQEFDLSGSKFTSYKL GIEPDNKKLLFQYESPETGKVYGDVSVFKGNVLRTTFSDKTNQIEVSLNGKSVYLKKIK
Sequences:
>Translated_139_residues MKKFTLLLALIFTTISFAQTITSKKEDVSPAQYDLIQKVNQFYPDITVNKTITNFYADGTIIDSQQEFDLSGSKFTSYKL GIEPDNKKLLFQYESPETGKVYGDVSVFKGNVLRTTFSDKTNQIEVSLNGKSVYLKKIK >Mature_139_residues MKKFTLLLALIFTTISFAQTITSKKEDVSPAQYDLIQKVNQFYPDITVNKTITNFYADGTIIDSQQEFDLSGSKFTSYKL GIEPDNKKLLFQYESPETGKVYGDVSVFKGNVLRTTFSDKTNQIEVSLNGKSVYLKKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15760; Mature: 15760
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFTLLLALIFTTISFAQTITSKKEDVSPAQYDLIQKVNQFYPDITVNKTITNFYADGT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCEEEEEEECCE IIDSQQEFDLSGSKFTSYKLGIEPDNKKLLFQYESPETGKVYGDVSVFKGNVLRTTFSDK EECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCEEEEEECCC TNQIEVSLNGKSVYLKKIK CCEEEEEECCCEEEEEECC >Mature Secondary Structure MKKFTLLLALIFTTISFAQTITSKKEDVSPAQYDLIQKVNQFYPDITVNKTITNFYADGT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCEEEEEEECCE IIDSQQEFDLSGSKFTSYKLGIEPDNKKLLFQYESPETGKVYGDVSVFKGNVLRTTFSDK EECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCEEEEEECCC TNQIEVSLNGKSVYLKKIK CCEEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA