BacMap

Definition	Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession	NC_009441
Length	6,096,872

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The map label for this gene is cshA [H]

Identifier: 146300600

GI number: 146300600

Start: 3381093

End: 3382427

Strand: Direct

Name: cshA [H]

Synonym: Fjoh_2850

Alternate gene names: 146300600

Gene position: 3381093-3382427 (Clockwise)

Preceding gene: 146300599

Following gene: 146300601

Centisome position: 55.46

GC content: 33.71

Gene sequence:

>1335_bases
ATGTCTAAACAATTCTCAACATTAGGAATTTCAGAACCTATTTTAAAAGCTTTAAGCGAATTAAATATTGTTGAACCAAC
AGAAATTCAACAAAAAACAATTCCGCTTTTATTAGCTGAAAACCATGATGTTGTAGGTTTGGCTAAAACCGGAACCGGAA
AAACAGCCGCTTTTGGACTTCCATTATTACAATTAATTGATACAAAATCAAGTGCTGTTCAGGCTGTAATTTTAGTGCCG
ACAAGAGAGTTAGGGCATCAGATTTTTAGAAATTTAGAAGATTTTTCAAAATATATCCCTAACATTTCAATTGCAGCAAC
TTGCGGCGGAATTCCAATAAAACCTCAAATTGAGCGTCTTAAAACTCCAACTCATATTATTGTTGCCACTCCGGGACGTT
TAATTGATTTGATTCAGAGAAAAGCAGTAGACTTAAAACAAACACAATATTTAGTTTTAGACGAAGCCGATGAAATGGTT
TCGATCCTAAAAGAAAGTCTGGATGAAATTTTAACCGAAATTCCTAAAAAACACCGTACTTTATTATTCTCAGCAACTTT
GCCGGGAACTATAAAACAATTGGTTCAGAATTATTTGAACAAAAATGTAGTTCAGGTAAGCGCAAGTATGGAAGTTGTAG
GCAATCAAGGAATTGACCACCAATATATTGTGGTAGATCCTATTGAAAAACTAGACGTTTTAATGCACTTTTTAAATTCA
AGAGAAGGAGAAAGAGGTATTATTTTCTGTAAAACAAAAGCTGCTGTCAACAAATTGGCAAAAAATCTGGCAATAAACCG
TTTTTCTTCTGGAGCTATTCATGGAAGCTTAACACAAGGTATTCGTGACAGAATCATGGAGCAGTTTCGTGAAGGTCATA
TTAATATTCTGGTTGCTACCGATTTAGCTGCAAGAGGAATTGACGTAAAAGAAATCTCCTATGTTGTAAATTACCATTTA
CCAGATGCTTACGAAACCTATGTTCACCGAAGCGGAAGAACCGCCAGAGCAGGAGCAAATGGGCTTTCGCTGACTGTTTT
ACAAGAAGAAGAAGTTTTTGAAATTGCTGATTTTGAAAGAGAACTAGGGCTTACATTTTCTAAGTTCCAAAAACCGTCTG
CATTAAGTATTGAAGAAAATAATACACTTTTATGGGCGAAACAAATCTTTAAAACTAAACCCAATCATGATATCTCAACT
GATTTAAAAACGAAAGTAAAAACCGTTTTTCATCATTTGACTAAAGACGAACTTATCGAGAAATTAATGGCAAATTATAT
TTTGCAAAACAAAATCGATATAGTTGATAAAACAGTTAAAAAAAGCAAAAAGTAA

Upstream 100 bases:

>100_bases
TTTCAAATGTCTTAATGGTTAAATAATTTTAAAGGGAAATAAATCACTTAAAGATTTTAGGAAAATCTAAATTCTAAAGT
CAAAAATCTAAAATTAAATC

Downstream 100 bases:

>100_bases
CAAAGATGACTTTTGTCATTGTTTATTAAAGTTGTACATTTATAAGGAATTATTTTATAATCCTACTTAATAAACAACAT
ATATGAACATAGTCATAATA

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSKQFSTLGISEPILKALSELNIVEPTEIQQKTIPLLLAENHDVVGLAKTGTGKTAAFGLPLLQLIDTKSSAVQAVILVP
TRELGHQIFRNLEDFSKYIPNISIAATCGGIPIKPQIERLKTPTHIIVATPGRLIDLIQRKAVDLKQTQYLVLDEADEMV
SILKESLDEILTEIPKKHRTLLFSATLPGTIKQLVQNYLNKNVVQVSASMEVVGNQGIDHQYIVVDPIEKLDVLMHFLNS
REGERGIIFCKTKAAVNKLAKNLAINRFSSGAIHGSLTQGIRDRIMEQFREGHINILVATDLAARGIDVKEISYVVNYHL
PDAYETYVHRSGRTARAGANGLSLTVLQEEEVFEIADFERELGLTFSKFQKPSALSIEENNTLLWAKQIFKTKPNHDIST
DLKTKVKTVFHHLTKDELIEKLMANYILQNKIDIVDKTVKKSKK

Sequences:

>Translated_444_residues
MSKQFSTLGISEPILKALSELNIVEPTEIQQKTIPLLLAENHDVVGLAKTGTGKTAAFGLPLLQLIDTKSSAVQAVILVP
TRELGHQIFRNLEDFSKYIPNISIAATCGGIPIKPQIERLKTPTHIIVATPGRLIDLIQRKAVDLKQTQYLVLDEADEMV
SILKESLDEILTEIPKKHRTLLFSATLPGTIKQLVQNYLNKNVVQVSASMEVVGNQGIDHQYIVVDPIEKLDVLMHFLNS
REGERGIIFCKTKAAVNKLAKNLAINRFSSGAIHGSLTQGIRDRIMEQFREGHINILVATDLAARGIDVKEISYVVNYHL
PDAYETYVHRSGRTARAGANGLSLTVLQEEEVFEIADFERELGLTFSKFQKPSALSIEENNTLLWAKQIFKTKPNHDIST
DLKTKVKTVFHHLTKDELIEKLMANYILQNKIDIVDKTVKKSKK
>Mature_443_residues
SKQFSTLGISEPILKALSELNIVEPTEIQQKTIPLLLAENHDVVGLAKTGTGKTAAFGLPLLQLIDTKSSAVQAVILVPT
RELGHQIFRNLEDFSKYIPNISIAATCGGIPIKPQIERLKTPTHIIVATPGRLIDLIQRKAVDLKQTQYLVLDEADEMVS
ILKESLDEILTEIPKKHRTLLFSATLPGTIKQLVQNYLNKNVVQVSASMEVVGNQGIDHQYIVVDPIEKLDVLMHFLNSR
EGERGIIFCKTKAAVNKLAKNLAINRFSSGAIHGSLTQGIRDRIMEQFREGHINILVATDLAARGIDVKEISYVVNYHLP
DAYETYVHRSGRTARAGANGLSLTVLQEEEVFEIADFERELGLTFSKFQKPSALSIEENNTLLWAKQIFKTKPNHDISTD
LKTKVKTVFHHLTKDELIEKLMANYILQNKIDIVDKTVKKSKK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=358, Percent_Identity=32.4022346368715, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI164664518, Length=361, Percent_Identity=32.9639889196676, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI20149629, Length=353, Percent_Identity=35.9773371104816, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI50659095, Length=393, Percent_Identity=33.8422391857506, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI13129006, Length=395, Percent_Identity=32.1518987341772, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI148613856, Length=346, Percent_Identity=34.971098265896, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI38201710, Length=346, Percent_Identity=34.971098265896, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI41327773, Length=377, Percent_Identity=35.8090185676393, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI4503529, Length=358, Percent_Identity=34.6368715083799, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=34.6368715083799, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI164419743, Length=383, Percent_Identity=32.8981723237598, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI51094101, Length=383, Percent_Identity=32.8981723237598, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI21071032, Length=364, Percent_Identity=34.6153846153846, Blast_Score=198, Evalue=8e-51,
Organism=Homo sapiens, GI41327779, Length=356, Percent_Identity=37.9213483146067, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=33.7730870712401, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI87196351, Length=374, Percent_Identity=33.6898395721925, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI301171475, Length=374, Percent_Identity=33.6898395721925, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI301171467, Length=374, Percent_Identity=33.6898395721925, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI83700235, Length=363, Percent_Identity=33.6088154269972, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI222352149, Length=342, Percent_Identity=34.5029239766082, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI169881239, Length=374, Percent_Identity=33.4224598930481, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI13514809, Length=374, Percent_Identity=33.4224598930481, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=32.8611898016997, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=32.3863636363636, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=32.3863636363636, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI31542656, Length=388, Percent_Identity=31.9587628865979, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI45446747, Length=378, Percent_Identity=32.8042328042328, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI45446743, Length=378, Percent_Identity=32.8042328042328, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI262118318, Length=340, Percent_Identity=34.4117647058824, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI216548263, Length=340, Percent_Identity=34.4117647058824, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI262231852, Length=340, Percent_Identity=34.4117647058824, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI13518015, Length=340, Percent_Identity=34.4117647058824, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=34.9162011173184, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=31.4121037463977, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI41327776, Length=353, Percent_Identity=33.1444759206799, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI188035877, Length=326, Percent_Identity=33.1288343558282, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI6005743, Length=366, Percent_Identity=30.0546448087432, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI8922886, Length=366, Percent_Identity=29.7814207650273, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI38327634, Length=388, Percent_Identity=31.9587628865979, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI62241022, Length=343, Percent_Identity=30.9037900874636, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI164419732, Length=341, Percent_Identity=30.791788856305, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI62241024, Length=326, Percent_Identity=30.0613496932515, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=29.5454545454545, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI38569503, Length=358, Percent_Identity=30.1675977653631, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=28.7878787878788, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=30.1675977653631, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI9966805, Length=332, Percent_Identity=31.6265060240964, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI17505907, Length=412, Percent_Identity=28.1553398058252, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI256773275, Length=374, Percent_Identity=28.6096256684492, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI4826686, Length=387, Percent_Identity=27.1317829457364, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI154759257, Length=365, Percent_Identity=28.7671232876712, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=31.1627906976744, Blast_Score=87, Evalue=4e-17,
Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=40.1617250673854, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1787016, Length=365, Percent_Identity=41.6438356164384, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1787605, Length=353, Percent_Identity=38.2436260623229, Blast_Score=225, Evalue=4e-60,
Organism=Escherichia coli, GI1788930, Length=338, Percent_Identity=37.2781065088757, Blast_Score=198, Evalue=6e-52,
Organism=Escherichia coli, GI1790214, Length=385, Percent_Identity=32.7272727272727, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI48994977, Length=118, Percent_Identity=30.5084745762712, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=33.4261838440111, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17555296, Length=371, Percent_Identity=36.9272237196765, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71995724, Length=358, Percent_Identity=33.7988826815642, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17507121, Length=358, Percent_Identity=33.5195530726257, Blast_Score=228, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=369, Percent_Identity=36.0433604336043, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17510309, Length=369, Percent_Identity=36.0433604336043, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=369, Percent_Identity=36.0433604336043, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=31.9444444444444, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=32.8611898016997, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=338, Percent_Identity=34.6153846153846, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=35.5742296918768, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI71999646, Length=363, Percent_Identity=32.2314049586777, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=33.0708661417323, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71999644, Length=363, Percent_Identity=32.2314049586777, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=32.4675324675325, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=33.9673913043478, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI17537549, Length=360, Percent_Identity=33.6111111111111, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17507945, Length=340, Percent_Identity=34.4117647058824, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=32.2751322751323, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=32.2751322751323, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17507879, Length=379, Percent_Identity=32.1899736147757, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17507877, Length=379, Percent_Identity=30.8707124010554, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=33.3333333333333, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=31.8051575931232, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=29.4906166219839, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17509811, Length=361, Percent_Identity=31.5789473684211, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17536099, Length=372, Percent_Identity=30.9139784946237, Blast_Score=157, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=325, Percent_Identity=31.6923076923077, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17536101, Length=372, Percent_Identity=30.9139784946237, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=33.2386363636364, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=31.7258883248731, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17536103, Length=375, Percent_Identity=31.2, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=29.5811518324607, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=31.989247311828, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=432, Percent_Identity=26.6203703703704, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17553716, Length=353, Percent_Identity=25.2124645892351, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=28.125, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=29.3010752688172, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=34.6534653465347, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=350, Percent_Identity=27.1428571428571, Blast_Score=127, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI25148205, Length=354, Percent_Identity=24.5762711864407, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=94, Percent_Identity=40.4255319148936, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25148291, Length=108, Percent_Identity=37.037037037037, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17565430, Length=380, Percent_Identity=24.4736842105263, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17557982, Length=435, Percent_Identity=22.7586206896552, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=35.2777777777778, Blast_Score=227, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=32.6027397260274, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=37.8151260504202, Blast_Score=222, Evalue=8e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=36.9747899159664, Blast_Score=221, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=38.2749326145553, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=34.7945205479452, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6322912, Length=359, Percent_Identity=35.6545961002786, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6322323, Length=359, Percent_Identity=35.6545961002786, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6320173, Length=416, Percent_Identity=33.4134615384615, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=32.967032967033, Blast_Score=199, Evalue=8e-52,
Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=32.8804347826087, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=33.3333333333333, Blast_Score=193, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=369, Percent_Identity=34.4173441734417, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6324620, Length=368, Percent_Identity=31.25, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=371, Percent_Identity=33.6927223719677, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6323947, Length=363, Percent_Identity=31.404958677686, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=415, Percent_Identity=30.6024096385542, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=397, Percent_Identity=30.7304785894207, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=385, Percent_Identity=30.6493506493506, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=343, Percent_Identity=32.9446064139942, Blast_Score=155, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6319714, Length=383, Percent_Identity=28.1984334203655, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6320449, Length=365, Percent_Identity=30.1369863013699, Blast_Score=150, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6322876, Length=482, Percent_Identity=27.3858921161826, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=27.2727272727273, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=26.5895953757225, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=34.0720221606648, Blast_Score=224, Evalue=7e-59,
Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=34.0720221606648, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24585582, Length=380, Percent_Identity=35.2631578947368, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI28574962, Length=369, Percent_Identity=35.7723577235772, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24645031, Length=358, Percent_Identity=32.122905027933, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644479, Length=361, Percent_Identity=36.2880886426593, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI281361218, Length=361, Percent_Identity=36.2880886426593, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24644481, Length=361, Percent_Identity=36.2880886426593, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24644483, Length=361, Percent_Identity=36.2880886426593, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI24644487, Length=361, Percent_Identity=36.2880886426593, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI45551833, Length=361, Percent_Identity=36.2880886426593, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24644485, Length=361, Percent_Identity=36.2880886426593, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24582080, Length=327, Percent_Identity=34.5565749235474, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24582078, Length=327, Percent_Identity=34.5565749235474, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI17136248, Length=327, Percent_Identity=34.5565749235474, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24582075, Length=327, Percent_Identity=34.5565749235474, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=34.6478873239437, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI24642151, Length=375, Percent_Identity=33.0666666666667, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI21355075, Length=350, Percent_Identity=34, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24584399, Length=364, Percent_Identity=33.5164835164835, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=34.453781512605, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI18857967, Length=350, Percent_Identity=33.7142857142857, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=31.7548746518106, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24584994, Length=386, Percent_Identity=32.1243523316062, Blast_Score=188, Evalue=6e-48,
Organism=Drosophila melanogaster, GI24581954, Length=354, Percent_Identity=32.7683615819209, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24581952, Length=354, Percent_Identity=32.7683615819209, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24581956, Length=354, Percent_Identity=32.7683615819209, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI17136814, Length=352, Percent_Identity=32.9545454545455, Blast_Score=184, Evalue=7e-47,
Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=30.8943089430894, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=35.8490566037736, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=33.5120643431635, Blast_Score=175, Evalue=6e-44,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=33.2409972299169, Blast_Score=174, Evalue=8e-44,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=33.2409972299169, Blast_Score=174, Evalue=8e-44,
Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=34.5945945945946, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=28.0542986425339, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI24642822, Length=390, Percent_Identity=30.7692307692308, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI17647335, Length=382, Percent_Identity=28.0104712041885, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24666101, Length=434, Percent_Identity=29.2626728110599, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI18859659, Length=447, Percent_Identity=30.4250559284116, Blast_Score=144, Evalue=9e-35,
Organism=Drosophila melanogaster, GI28571338, Length=447, Percent_Identity=30.4250559284116, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24643725, Length=404, Percent_Identity=30.4455445544554, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI17136666, Length=411, Percent_Identity=27.007299270073, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=27.6595744680851, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI19920478, Length=346, Percent_Identity=26.878612716763, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=26.2599469496021, Blast_Score=101, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49595; Mature: 49464

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQFSTLGISEPILKALSELNIVEPTEIQQKTIPLLLAENHDVVGLAKTGTGKTAAFGL
CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCEEEEEECCCCCCHHHHH
PLLQLIDTKSSAVQAVILVPTRELGHQIFRNLEDFSKYIPNISIAATCGGIPIKPQIERL
HHHHHHCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHC
KTPTHIIVATPGRLIDLIQRKAVDLKQTQYLVLDEADEMVSILKESLDEILTEIPKKHRT
CCCCEEEEECCHHHHHHHHHHHCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHCE
LLFSATLPGTIKQLVQNYLNKNVVQVSASMEVVGNQGIDHQYIVVDPIEKLDVLMHFLNS
EEEECCCCHHHHHHHHHHHCCCEEEEECHHEEECCCCCCCEEEEECCHHHHHHHHHHHHC
REGERGIIFCKTKAAVNKLAKNLAINRFSSGAIHGSLTQGIRDRIMEQFREGHINILVAT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
DLAARGIDVKEISYVVNYHLPDAYETYVHRSGRTARAGANGLSLTVLQEEEVFEIADFER
CHHHCCCCHHHHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
ELGLTFSKFQKPSALSIEENNTLLWAKQIFKTKPNHDISTDLKTKVKTVFHHLTKDELIE
HHCCCHHHCCCCCCEEEECCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
KLMANYILQNKIDIVDKTVKKSKK
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKQFSTLGISEPILKALSELNIVEPTEIQQKTIPLLLAENHDVVGLAKTGTGKTAAFGL
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCEEEEEECCCCCCHHHHH
PLLQLIDTKSSAVQAVILVPTRELGHQIFRNLEDFSKYIPNISIAATCGGIPIKPQIERL
HHHHHHCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHC
KTPTHIIVATPGRLIDLIQRKAVDLKQTQYLVLDEADEMVSILKESLDEILTEIPKKHRT
CCCCEEEEECCHHHHHHHHHHHCCHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHCE
LLFSATLPGTIKQLVQNYLNKNVVQVSASMEVVGNQGIDHQYIVVDPIEKLDVLMHFLNS
EEEECCCCHHHHHHHHHHHCCCEEEEECHHEEECCCCCCCEEEEECCHHHHHHHHHHHHC
REGERGIIFCKTKAAVNKLAKNLAINRFSSGAIHGSLTQGIRDRIMEQFREGHINILVAT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
DLAARGIDVKEISYVVNYHLPDAYETYVHRSGRTARAGANGLSLTVLQEEEVFEIADFER
CHHHCCCCHHHHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
ELGLTFSKFQKPSALSIEENNTLLWAKQIFKTKPNHDISTDLKTKVKTVFHHLTKDELIE
HHCCCHHHCCCCCCEEEECCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
KLMANYILQNKIDIVDKTVKKSKK
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA