| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300554
Identifier: 146300554
GI number: 146300554
Start: 3336111
End: 3337265
Strand: Direct
Name: 146300554
Synonym: Fjoh_2804
Alternate gene names: NA
Gene position: 3336111-3337265 (Clockwise)
Preceding gene: 146300552
Following gene: 146300555
Centisome position: 54.72
GC content: 31.34
Gene sequence:
>1155_bases ATGAATTTAGAAGAATTATTTAACCAATACAAAGAACAATCAATTGAAGGACGTTATCTAACTTTAGATCATATCAAACC TTTATTAGATAAATTAAATACTAATAATGAAGTAAAAGTTATTGGCAAATCTGTTTTAGGAGAACCTATATATAGTTACC AATTTGGGACAGGAAAAACACGTATATATTTATGGTCTCAAATGCACGGTAACGAAAGCACTACAACCAAAGCACTTTTT GACTTTATTAATGTATTAAACAGCAAATCTGATTTTGCAGCAAAAATGCTTAATACATTTACATTTTATGCCATTCCTAT CTTAAATCCTGACGGCGCCAGACTTTACACTCGCGAGAACGCAAATAAAATTGACTTAAACCGCGATTCTCAAAACCTTA CACAGCCGGAAAGTAATGTTCTAAGAGAGGTTTTCGAAGCTTTTAAGCCTGATTTTTGCTTTAACCTTCACGATCAGCGT ACTATTTTTGGTGCAGGTGACACAGGAAAACCTGCAACGGTTTCTTTTTTGGCTCCATCTTATAATGAGGAAAGAGAAAT AAATGAAAACCGCCAAAAAGCTATCAATTTAATTGCCGGAATTAACGATGAATTGCAGAAATATATTCCCGGACAAGTGG GCAGATTTGACGATTCGTTCAATATAAACTGTATAGGAGACACTTTTCAGTTTTTAGGTGTTCCTACTATATTATTTGAA GCAGGCCATTATCCTAACGACTACGATAGGGAAATCACCAGAAAATACATATTTTTCTCACTAATTTCGAGCTTTAAGCT TATAAGCGAAAACGATTTAGTTGTCAATAGAAATTCCGATTATTTGAATATTTCACAAAATAAAGTGGTTTTTTATGATT TTATGTATAAAAATATCAAAATAAATTATGATGGTATCGAAATTATTACGAATTTTGTCGCACAATACAAAGAAGAATTG ATTGAAAATAAGATTCATTTTAATGCTTACATAGTCGAGGCAGGCGAATTGGAAAATTATTTTGGTCATTACGAATACGA TGGAAGAGGAGCTGTTTATTCTGATGATTATTCTAATATTCCGAAAATGAACCAAAAAGCAGATTTTTATTTAAATAAAA ACATTAAATTTGTTAACGGGTTGATAAAAAGTTAA
Upstream 100 bases:
>100_bases CAATGTTAAAACCTGTTTACATTTCTAAATTCAACTAATTTTTCAATGTTTACAATTGTAAAAATAAAGATGTTTACTTT TGTAAACTAATCAAAACACA
Downstream 100 bases:
>100_bases TTTTTATGTGAATTTGTTATTTTTTATATATATTTTTATACTTTGTAATAGCAATTAGTAATATTAATTAAAGAATTATG AGTAAATTTCGTTTAGATGA
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: M14 Family Peptidase; Carboxypeptidase; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family Protein; M14 Family Carboxypeptidase; Peptidase Family M
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNLEELFNQYKEQSIEGRYLTLDHIKPLLDKLNTNNEVKVIGKSVLGEPIYSYQFGTGKTRIYLWSQMHGNESTTTKALF DFINVLNSKSDFAAKMLNTFTFYAIPILNPDGARLYTRENANKIDLNRDSQNLTQPESNVLREVFEAFKPDFCFNLHDQR TIFGAGDTGKPATVSFLAPSYNEEREINENRQKAINLIAGINDELQKYIPGQVGRFDDSFNINCIGDTFQFLGVPTILFE AGHYPNDYDREITRKYIFFSLISSFKLISENDLVVNRNSDYLNISQNKVVFYDFMYKNIKINYDGIEIITNFVAQYKEEL IENKIHFNAYIVEAGELENYFGHYEYDGRGAVYSDDYSNIPKMNQKADFYLNKNIKFVNGLIKS
Sequences:
>Translated_384_residues MNLEELFNQYKEQSIEGRYLTLDHIKPLLDKLNTNNEVKVIGKSVLGEPIYSYQFGTGKTRIYLWSQMHGNESTTTKALF DFINVLNSKSDFAAKMLNTFTFYAIPILNPDGARLYTRENANKIDLNRDSQNLTQPESNVLREVFEAFKPDFCFNLHDQR TIFGAGDTGKPATVSFLAPSYNEEREINENRQKAINLIAGINDELQKYIPGQVGRFDDSFNINCIGDTFQFLGVPTILFE AGHYPNDYDREITRKYIFFSLISSFKLISENDLVVNRNSDYLNISQNKVVFYDFMYKNIKINYDGIEIITNFVAQYKEEL IENKIHFNAYIVEAGELENYFGHYEYDGRGAVYSDDYSNIPKMNQKADFYLNKNIKFVNGLIKS >Mature_384_residues MNLEELFNQYKEQSIEGRYLTLDHIKPLLDKLNTNNEVKVIGKSVLGEPIYSYQFGTGKTRIYLWSQMHGNESTTTKALF DFINVLNSKSDFAAKMLNTFTFYAIPILNPDGARLYTRENANKIDLNRDSQNLTQPESNVLREVFEAFKPDFCFNLHDQR TIFGAGDTGKPATVSFLAPSYNEEREINENRQKAINLIAGINDELQKYIPGQVGRFDDSFNINCIGDTFQFLGVPTILFE AGHYPNDYDREITRKYIFFSLISSFKLISENDLVVNRNSDYLNISQNKVVFYDFMYKNIKINYDGIEIITNFVAQYKEEL IENKIHFNAYIVEAGELENYFGHYEYDGRGAVYSDDYSNIPKMNQKADFYLNKNIKFVNGLIKS
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44441; Mature: 44441
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEELFNQYKEQSIEGRYLTLDHIKPLLDKLNTNNEVKVIGKSVLGEPIYSYQFGTGKT CCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEEEHHHHCCCCEEEECCCCCE RIYLWSQMHGNESTTTKALFDFINVLNSKSDFAAKMLNTFTFYAIPILNPDGARLYTREN EEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEECCCCCEEEEECC ANKIDLNRDSQNLTQPESNVLREVFEAFKPDFCFNLHDQRTIFGAGDTGKPATVSFLAPS CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCEEEEECCC YNEEREINENRQKAINLIAGINDELQKYIPGQVGRFDDSFNINCIGDTFQFLGVPTILFE CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHCCCHHEEE AGHYPNDYDREITRKYIFFSLISSFKLISENDLVVNRNSDYLNISQNKVVFYDFMYKNIK CCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCEEEECCCEEEEEEEEEEEEE INYDGIEIITNFVAQYKEELIENKIHFNAYIVEAGELENYFGHYEYDGRGAVYSDDYSNI EECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHCCCEEECCCCCEECCCCCCC PKMNQKADFYLNKNIKFVNGLIKS CCCCCCCCEEECCCHHHHHHHHCC >Mature Secondary Structure MNLEELFNQYKEQSIEGRYLTLDHIKPLLDKLNTNNEVKVIGKSVLGEPIYSYQFGTGKT CCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEEEHHHHCCCCEEEECCCCCE RIYLWSQMHGNESTTTKALFDFINVLNSKSDFAAKMLNTFTFYAIPILNPDGARLYTREN EEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEECCCCCEEEEECC ANKIDLNRDSQNLTQPESNVLREVFEAFKPDFCFNLHDQRTIFGAGDTGKPATVSFLAPS CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCEEEEECCC YNEEREINENRQKAINLIAGINDELQKYIPGQVGRFDDSFNINCIGDTFQFLGVPTILFE CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHCCCHHEEE AGHYPNDYDREITRKYIFFSLISSFKLISENDLVVNRNSDYLNISQNKVVFYDFMYKNIK CCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCEEEECCCEEEEEEEEEEEEE INYDGIEIITNFVAQYKEELIENKIHFNAYIVEAGELENYFGHYEYDGRGAVYSDDYSNI EECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHCCCEEECCCCCEECCCCCCC PKMNQKADFYLNKNIKFVNGLIKS CCCCCCCCEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA