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The map label for this gene is ypdA [H]

Identifier: 146300542

GI number: 146300542

Start: 3324759

End: 3325727

Strand: Direct

Name: ypdA [H]

Synonym: Fjoh_2792

Alternate gene names: 146300542

Gene position: 3324759-3325727 (Clockwise)

Preceding gene: 146300541

Following gene: 146300545

Centisome position: 54.53

GC content: 32.92

Gene sequence:

>969_bases
ATGACAGATCAATATGATTTAATTATTGTGGGAGGCGGACCAATTGGGCTGGCCTGCGCAATTGAAGCTCAAAAGAAAAA
CTTACGATATTTAATTATAGAAAAAGGAGCCATTGTAAATAGTATTTTCAACTATCCGTTGTACATGACTTTTTTTTCAA
CTGCCGAAAGACTTGAAATTGGTGATATTCCGTTTAATTGCTTAGCGCCAAAACCAGGACGTCAGGAAGCTTTAGAATAT
TACCGAAATATTCATCGTTATTTTAATTTCAATATTAATTTATTTGAAAAAGTAACCGAGATAAAAAAAGTCGAAAATGC
TCTTTTTGTGGTTTCGACAGATAAAAGTTTGTATCAGTCTAAAAATGTAATCATTGCTACAGGATTTTATGATATTCCAA
TTTTAATGAATGTAAAAGGGGAGGAATTACCAAAAGTCCGCCATTATTATAAAGAAGCACATGAATATGCTTTTAGAAAT
GTTTTGGTTGTTGGCGCCAATAATTCGTCTGTAGATGCGGCTTTGGAATGCTGGAGAAAAGGTGCAAATGTAACAATGGT
AATTCGTAAAAACGAAATCAACAGCAGAGTAAAATATTGGGTTAAACCCGATGTTGAAAACCGAATTGCGGAAGGAAGCA
TTAAAGCGTATTTTGAATCAAATATTACTGAAATCCGTGATAATGAAGTTGAAATTGAAACTCCAAACGGAAAAGTTACT
ATTGAAAATGATTTTGTTTTAGCTTTAACAGGATACAAACCAGATTTAAATTTTCTTGAAAATATTGGAATTCAGCTTTC
TAACGATGAATTGAAAATTCCAGCTTATAATCCTGAAACGATGGAAACAAATGTAGAAGGATTATTTCTCGCAGGTGTTG
TGTGCGGCGGTATGCAGACGCATAAATGGTTCATTGAAAATTCAAGAATCCACGCAAATATGATTATGGATTACATAACT
ACAAAATAA

Upstream 100 bases:

>100_bases
AAAACCTGACTGGCTGGGCGAAGAAGTTACAAATGATGAAAGATATTACAATGCTTATTTGAGTAAAAATCCATTTAAAA
ACTGGAGAAAAGAATAATTT

Downstream 100 bases:

>100_bases
TAGCTGCGAATTATAGTATGTATTTTTTATACAATGTCAGTTCGAGCGAAGACGAGAACAAACAAGCATCTCGACTTCGC
TCGGTATGACAACCTTTTAT

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTDQYDLIIVGGGPIGLACAIEAQKKNLRYLIIEKGAIVNSIFNYPLYMTFFSTAERLEIGDIPFNCLAPKPGRQEALEY
YRNIHRYFNFNINLFEKVTEIKKVENALFVVSTDKSLYQSKNVIIATGFYDIPILMNVKGEELPKVRHYYKEAHEYAFRN
VLVVGANNSSVDAALECWRKGANVTMVIRKNEINSRVKYWVKPDVENRIAEGSIKAYFESNITEIRDNEVEIETPNGKVT
IENDFVLALTGYKPDLNFLENIGIQLSNDELKIPAYNPETMETNVEGLFLAGVVCGGMQTHKWFIENSRIHANMIMDYIT
TK

Sequences:

>Translated_322_residues
MTDQYDLIIVGGGPIGLACAIEAQKKNLRYLIIEKGAIVNSIFNYPLYMTFFSTAERLEIGDIPFNCLAPKPGRQEALEY
YRNIHRYFNFNINLFEKVTEIKKVENALFVVSTDKSLYQSKNVIIATGFYDIPILMNVKGEELPKVRHYYKEAHEYAFRN
VLVVGANNSSVDAALECWRKGANVTMVIRKNEINSRVKYWVKPDVENRIAEGSIKAYFESNITEIRDNEVEIETPNGKVT
IENDFVLALTGYKPDLNFLENIGIQLSNDELKIPAYNPETMETNVEGLFLAGVVCGGMQTHKWFIENSRIHANMIMDYIT
TK
>Mature_321_residues
TDQYDLIIVGGGPIGLACAIEAQKKNLRYLIIEKGAIVNSIFNYPLYMTFFSTAERLEIGDIPFNCLAPKPGRQEALEYY
RNIHRYFNFNINLFEKVTEIKKVENALFVVSTDKSLYQSKNVIIATGFYDIPILMNVKGEELPKVRHYYKEAHEYAFRNV
LVVGANNSSVDAALECWRKGANVTMVIRKNEINSRVKYWVKPDVENRIAEGSIKAYFESNITEIRDNEVEIETPNGKVTI
ENDFVLALTGYKPDLNFLENIGIQLSNDELKIPAYNPETMETNVEGLFLAGVVCGGMQTHKWFIENSRIHANMIMDYITT
K

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 36768; Mature: 36636

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQYDLIIVGGGPIGLACAIEAQKKNLRYLIIEKGAIVNSIFNYPLYMTFFSTAERLEI
CCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHCCCEEEEECCCHHHEEE
GDIPFNCLAPKPGRQEALEYYRNIHRYFNFNINLFEKVTEIKKVENALFVVSTDKSLYQS
CCCCCEEECCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCEEEEEECCHHHHHC
KNVIIATGFYDIPILMNVKGEELPKVRHYYKEAHEYAFRNVLVVGANNSSVDAALECWRK
CCEEEEECCEECEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHC
GANVTMVIRKNEINSRVKYWVKPDVENRIAEGSIKAYFESNITEIRDNEVEIETPNGKVT
CCCEEEEEEECCCCCEEEEEECCCHHHHHCCCCEEEEECCCCCEECCCEEEEECCCCEEE
IENDFVLALTGYKPDLNFLENIGIQLSNDELKIPAYNPETMETNVEGLFLAGVVCGGMQT
EECCEEEEEECCCCCHHHHHHCCCEECCCCEEECCCCCCCCCCCCCEEEEEEEHHCCCEE
HKWFIENSRIHANMIMDYITTK
EEEEEECCEEEHHHHHHHHCCC
>Mature Secondary Structure 
TDQYDLIIVGGGPIGLACAIEAQKKNLRYLIIEKGAIVNSIFNYPLYMTFFSTAERLEI
CCCEEEEEECCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHCCCEEEEECCCHHHEEE
GDIPFNCLAPKPGRQEALEYYRNIHRYFNFNINLFEKVTEIKKVENALFVVSTDKSLYQS
CCCCCEEECCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCEEEEEECCHHHHHC
KNVIIATGFYDIPILMNVKGEELPKVRHYYKEAHEYAFRNVLVVGANNSSVDAALECWRK
CCEEEEECCEECEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHC
GANVTMVIRKNEINSRVKYWVKPDVENRIAEGSIKAYFESNITEIRDNEVEIETPNGKVT
CCCEEEEEEECCCCCEEEEEECCCHHHHHCCCCEEEEECCCCCEECCCEEEEECCCCEEE
IENDFVLALTGYKPDLNFLENIGIQLSNDELKIPAYNPETMETNVEGLFLAGVVCGGMQT
EECCEEEEEECCCCCHHHHHHCCCEECCCCEEECCCCCCCCCCCCCEEEEEEEHHCCCEE
HKWFIENSRIHANMIMDYITTK
EEEEEECCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]