Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146300505
Identifier: 146300505
GI number: 146300505
Start: 3288483
End: 3289502
Strand: Direct
Name: 146300505
Synonym: Fjoh_2755
Alternate gene names: NA
Gene position: 3288483-3289502 (Clockwise)
Preceding gene: 146300504
Following gene: 146300506
Centisome position: 53.94
GC content: 35.59
Gene sequence:
>1020_bases ATGTTAAAACACTATGTTTTATTTTTAATGATACTAATTTGTTCGGTTTCTTTCGGGCAGATTGGAGGGCGTTACACTTA TCAATTTCTTAACCTGACAACCAATCCTCGTCAGGCCGCACTGGGCGGAAAAACCATTACCATTTATGATGAAGATGTCA ATCAGGCTATGTCAAATCCAGCAGCCTTAAACGCAGATATGGACAATCATTTGGCCTTAAATTATGGAAATTATTACGGC GAAGCTTCTTACGGAACGGGTTCGTATGCTTATACTTACGATCGTCACTTACAGACTTTTTATGCCGGAGTGAATTATAT TAATTACGGTTCATTTGAGGGATATGATGAAAATGGTCAAAGAACATCTGATTTTACAGGAAGCGAAGGGGCATTATCAG TTGGTTATGCCTACAATGTTCCTTTTACAGATCTGCATATAGGTGTAAATGGTAAATTGATAACCTCTACTCTGGAAAGT TATAATTCGATTGGCGGTGCCTTAGATTTAGGATTTTTATATATAGATGAAAGAAATGATATAAATTATGCGCTTGTATT TAGAAATATAGGTACACAATTTAAAACCTACTCTGGAATAAAAGAAAATCTGCCTTTTGAAATTACTGCCGGAATTTCTC AGGAATTAGAGCATATTCCTCTTCGCTGGCATCTTACTTTAGAGAATTTACAGCAATGGGATATTGCTTTTTCAAATCCT GTCCGCGGCGAGACCAATATAGACGGAACTACAAATGCTGAAAAAGTTTCATTTGTAAATAATGCTTTGAGACATGTTGT ATTTGGTGTCGAGCTTTTTCCGCAAAGGGCTTTTAATGTGCGTTTAGGATATAATTTTAGAAGAGGAGAAGAATTACGTG TTGAAGAACAGCGTAATTTTTCGGGAGTTTCACTTGGGTTTGGTTTACGAATGAATAAGTTAAAATTTAACTATTCGTAT TCGAGATATACATTAGCAGCAAATACAAGTCTTTTTGGGTTGGTTTTAAACCTTCAATAA
Upstream 100 bases:
>100_bases TATTGGAGTTTGGATTTTTTTTATTGGATCTCATTTTTTGAGGTATATAATTTTATATTTGCATCTGCGTTATTTCCATA TATAGGAACGCCCAAAACGA
Downstream 100 bases:
>100_bases CAACACTTTTCAATAATAATATATCCTTTTGTGATCGTGTAAATACGGCTGTAAAAGGATTTTTTAATGAATGCCTTTTT GAGCAGTTCTGTATAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLKHYVLFLMILICSVSFGQIGGRYTYQFLNLTTNPRQAALGGKTITIYDEDVNQAMSNPAALNADMDNHLALNYGNYYG EASYGTGSYAYTYDRHLQTFYAGVNYINYGSFEGYDENGQRTSDFTGSEGALSVGYAYNVPFTDLHIGVNGKLITSTLES YNSIGGALDLGFLYIDERNDINYALVFRNIGTQFKTYSGIKENLPFEITAGISQELEHIPLRWHLTLENLQQWDIAFSNP VRGETNIDGTTNAEKVSFVNNALRHVVFGVELFPQRAFNVRLGYNFRRGEELRVEEQRNFSGVSLGFGLRMNKLKFNYSY SRYTLAANTSLFGLVLNLQ
Sequences:
>Translated_339_residues MLKHYVLFLMILICSVSFGQIGGRYTYQFLNLTTNPRQAALGGKTITIYDEDVNQAMSNPAALNADMDNHLALNYGNYYG EASYGTGSYAYTYDRHLQTFYAGVNYINYGSFEGYDENGQRTSDFTGSEGALSVGYAYNVPFTDLHIGVNGKLITSTLES YNSIGGALDLGFLYIDERNDINYALVFRNIGTQFKTYSGIKENLPFEITAGISQELEHIPLRWHLTLENLQQWDIAFSNP VRGETNIDGTTNAEKVSFVNNALRHVVFGVELFPQRAFNVRLGYNFRRGEELRVEEQRNFSGVSLGFGLRMNKLKFNYSY SRYTLAANTSLFGLVLNLQ >Mature_339_residues MLKHYVLFLMILICSVSFGQIGGRYTYQFLNLTTNPRQAALGGKTITIYDEDVNQAMSNPAALNADMDNHLALNYGNYYG EASYGTGSYAYTYDRHLQTFYAGVNYINYGSFEGYDENGQRTSDFTGSEGALSVGYAYNVPFTDLHIGVNGKLITSTLES YNSIGGALDLGFLYIDERNDINYALVFRNIGTQFKTYSGIKENLPFEITAGISQELEHIPLRWHLTLENLQQWDIAFSNP VRGETNIDGTTNAEKVSFVNNALRHVVFGVELFPQRAFNVRLGYNFRRGEELRVEEQRNFSGVSLGFGLRMNKLKFNYSY SRYTLAANTSLFGLVLNLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38229; Mature: 38229
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKHYVLFLMILICSVSFGQIGGRYTYQFLNLTTNPRQAALGGKTITIYDEDVNQAMSNP CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHCCCCEEEEEECHHHHHHCCC AALNADMDNHLALNYGNYYGEASYGTGSYAYTYDRHLQTFYAGVNYINYGSFEGYDENGQ CEEECCCCCCEEEECCCEECCCCCCCCCEEEEHHHHHHHHHHCCCEEECCCCCCCCCCCC RTSDFTGSEGALSVGYAYNVPFTDLHIGVNGKLITSTLESYNSIGGALDLGFLYIDERND CCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEEHHHHHHHHHCCCEEEEEEEEEECCCC INYALVFRNIGTQFKTYSGIKENLPFEITAGISQELEHIPLRWHLTLENLQQWDIAFSNP CEEEEEEECCCCCHHECCCHHHCCCEEEECCCHHHHHHCCEEEEEEHHCCCCCCEEECCC VRGETNIDGTTNAEKVSFVNNALRHVVFGVELFPQRAFNVRLGYNFRRGEELRVEEQRNF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHCCC SGVSLGFGLRMNKLKFNYSYSRYTLAANTSLFGLVLNLQ CCEEEECCEEEEEEEEEECEEEEEEEECCEEEEEEEEEC >Mature Secondary Structure MLKHYVLFLMILICSVSFGQIGGRYTYQFLNLTTNPRQAALGGKTITIYDEDVNQAMSNP CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHCCCCEEEEEECHHHHHHCCC AALNADMDNHLALNYGNYYGEASYGTGSYAYTYDRHLQTFYAGVNYINYGSFEGYDENGQ CEEECCCCCCEEEECCCEECCCCCCCCCEEEEHHHHHHHHHHCCCEEECCCCCCCCCCCC RTSDFTGSEGALSVGYAYNVPFTDLHIGVNGKLITSTLESYNSIGGALDLGFLYIDERND CCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEEHHHHHHHHHCCCEEEEEEEEEECCCC INYALVFRNIGTQFKTYSGIKENLPFEITAGISQELEHIPLRWHLTLENLQQWDIAFSNP CEEEEEEECCCCCHHECCCHHHCCCEEEECCCHHHHHHCCEEEEEEHHCCCCCCEEECCC VRGETNIDGTTNAEKVSFVNNALRHVVFGVELFPQRAFNVRLGYNFRRGEELRVEEQRNF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHCCC SGVSLGFGLRMNKLKFNYSYSRYTLAANTSLFGLVLNLQ CCEEEECCEEEEEEEEEECEEEEEEEECCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA