Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300466

Identifier: 146300466

GI number: 146300466

Start: 3237924

End: 3239387

Strand: Direct

Name: 146300466

Synonym: Fjoh_2716

Alternate gene names: NA

Gene position: 3237924-3239387 (Clockwise)

Preceding gene: 146300465

Following gene: 146300467

Centisome position: 53.11

GC content: 36.48

Gene sequence:

>1464_bases
ATGCAGTCACGTAGAAAATTTATAAAAAACGCAGGTATTTTTTCAGCAGGTTTATTAGCAATTCAAACAGAAGCTTTTGG
ATTTAATTCAGATACTTTTCAGTTTCCGCTAAAAGATTTTGTTTCTAAAAGACCACCTGTTGCCGAAAGAAAATTTACAA
GTAAGGCAATTGAAGCCGCTATTGTACGTGTTAAAAAACAAATTGCCAATCCAGAATTAGCATGGATATTTGAAAACTGT
TTCCCAAATACGCTAGATACAACAGTTGATTTTGAAATTATTGACGGAAAACCGGACACGTATGTAATTACGGGAGATAT
TGATGCCATGTGGCTTAGAGATAGTACAGCACAGATTTGGCCGTATATTCCGTTTGTAAAGGAAGATCCAAAACTCGCAG
AACTGGTAAAAGGAGTAATCAATCGTCAGGCGAAATGTATTCTGCTGGATCCGTATGCTAATGCTTTTTATAAAGATTTC
ACGAAGGAAAGCGAATGGAAAAATGACCTTACTAAAATGCAGCCCGGAATTCATGAAAGAAAATGGGAAATTGACAGTTT
GTGTTATCCAGTTAGATTAGCACACGGATATTGGAAAGAAACAGGAGATATCAGTTTGTTTGATGCCAAATGGAAAGAAG
CGATGCTTTTAATTCTGCAGACTTTTAAAGAGCAGCAGCGAATGGACGGGAAAGGCGGACCGTATAGTTTTCAGCGTCAG
ACAGCGTGGGCAACAGATGGAGTTCCGTTAGGCGGTTACGGTTATCCTGTAAAACCTTGCGGATTAATTGTTTCGACTTT
CAGACCAAGCGACGATTCTACTTTGTTTGGTTATTTGATTCCGAGTAATATGTTTGCGATTGAAATACTAGGTTATTTAA
TCGAAATTTTCTCTTTACCGGCTTTAAAAGACAATGATCTAGTTGTAAAAGCCACAAAATTAAGAGATGAAGTTCAAAAA
GGACTTAATGAACATGGAATAATCAATCATCCAAAATTCGGGAAAATTATTGCTTTTGAAGTAAACGGATACGGCAGTTT
CCACATGATGGACGATGCTAATGTGCCGTCTTTATTATCATTACCTTATTTAGGTGCTATTGCTCCAAATGATCCTTTAT
ATCTAAATACACGAAAAGTAGTGCTTTCAGAAAACAATCCGTTTTTCTACAAAGGAAAAGCAGGAGAAGGTATTGGCGGT
CCGCACACCGGAGTCGATACAATCTGGCCTATGAGTATTGTTTTAAGAGCCATTACAAGTGTAGACGAAAAAGAAATAAA
AGCTTGTATCAGTAATTTAATTAAAACCAATGCCGATACAGGATTTATGCACGAATCTTTCCATAAAGACGACGTTAATA
AATTTACCCGTAAATGGTTTGCGTGGGCAAATACACTTTTTGGAGAAATGATTGTACATACCAGCATTCATTATCCTCAA
ATTTTAAAAGATAAAAATATCTAG

Upstream 100 bases:

>100_bases
GAGAATTAAATTTTGATATGACAAGTTCTCCAAATTTAAAAAGAGGCACAGCAAAAGAATCATACCCATATTCTTACTCA
ACTTCAAAATAAAAATATAT

Downstream 100 bases:

>100_bases
TACTAAGCAAAATAAGGAAAAATGAATACATCATACGCCATTGGGCTAGATATAGGCGGGACACATATTACAGCTGGAGT
TATCAATAAAACAGAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MQSRRKFIKNAGIFSAGLLAIQTEAFGFNSDTFQFPLKDFVSKRPPVAERKFTSKAIEAAIVRVKKQIANPELAWIFENC
FPNTLDTTVDFEIIDGKPDTYVITGDIDAMWLRDSTAQIWPYIPFVKEDPKLAELVKGVINRQAKCILLDPYANAFYKDF
TKESEWKNDLTKMQPGIHERKWEIDSLCYPVRLAHGYWKETGDISLFDAKWKEAMLLILQTFKEQQRMDGKGGPYSFQRQ
TAWATDGVPLGGYGYPVKPCGLIVSTFRPSDDSTLFGYLIPSNMFAIEILGYLIEIFSLPALKDNDLVVKATKLRDEVQK
GLNEHGIINHPKFGKIIAFEVNGYGSFHMMDDANVPSLLSLPYLGAIAPNDPLYLNTRKVVLSENNPFFYKGKAGEGIGG
PHTGVDTIWPMSIVLRAITSVDEKEIKACISNLIKTNADTGFMHESFHKDDVNKFTRKWFAWANTLFGEMIVHTSIHYPQ
ILKDKNI

Sequences:

>Translated_487_residues
MQSRRKFIKNAGIFSAGLLAIQTEAFGFNSDTFQFPLKDFVSKRPPVAERKFTSKAIEAAIVRVKKQIANPELAWIFENC
FPNTLDTTVDFEIIDGKPDTYVITGDIDAMWLRDSTAQIWPYIPFVKEDPKLAELVKGVINRQAKCILLDPYANAFYKDF
TKESEWKNDLTKMQPGIHERKWEIDSLCYPVRLAHGYWKETGDISLFDAKWKEAMLLILQTFKEQQRMDGKGGPYSFQRQ
TAWATDGVPLGGYGYPVKPCGLIVSTFRPSDDSTLFGYLIPSNMFAIEILGYLIEIFSLPALKDNDLVVKATKLRDEVQK
GLNEHGIINHPKFGKIIAFEVNGYGSFHMMDDANVPSLLSLPYLGAIAPNDPLYLNTRKVVLSENNPFFYKGKAGEGIGG
PHTGVDTIWPMSIVLRAITSVDEKEIKACISNLIKTNADTGFMHESFHKDDVNKFTRKWFAWANTLFGEMIVHTSIHYPQ
ILKDKNI
>Mature_487_residues
MQSRRKFIKNAGIFSAGLLAIQTEAFGFNSDTFQFPLKDFVSKRPPVAERKFTSKAIEAAIVRVKKQIANPELAWIFENC
FPNTLDTTVDFEIIDGKPDTYVITGDIDAMWLRDSTAQIWPYIPFVKEDPKLAELVKGVINRQAKCILLDPYANAFYKDF
TKESEWKNDLTKMQPGIHERKWEIDSLCYPVRLAHGYWKETGDISLFDAKWKEAMLLILQTFKEQQRMDGKGGPYSFQRQ
TAWATDGVPLGGYGYPVKPCGLIVSTFRPSDDSTLFGYLIPSNMFAIEILGYLIEIFSLPALKDNDLVVKATKLRDEVQK
GLNEHGIINHPKFGKIIAFEVNGYGSFHMMDDANVPSLLSLPYLGAIAPNDPLYLNTRKVVLSENNPFFYKGKAGEGIGG
PHTGVDTIWPMSIVLRAITSVDEKEIKACISNLIKTNADTGFMHESFHKDDVNKFTRKWFAWANTLFGEMIVHTSIHYPQ
ILKDKNI

Specific function: Unknown

COG id: COG3538

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55152; Mature: 55152

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRRKFIKNAGIFSAGLLAIQTEAFGFNSDTFQFPLKDFVSKRPPVAERKFTSKAIEAA
CCHHHHHHHHCCCHHHCEEEEEEECCCCCCCCEECCHHHHHCCCCCCHHHHHHHHHHHHH
IVRVKKQIANPELAWIFENCFPNTLDTTVDFEIIDGKPDTYVITGDIDAMWLRDSTAQIW
HHHHHHHHCCCHHEEHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCHHHC
PYIPFVKEDPKLAELVKGVINRQAKCILLDPYANAFYKDFTKESEWKNDLTKMQPGIHER
CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCCCHH
KWEIDSLCYPVRLAHGYWKETGDISLFDAKWKEAMLLILQTFKEQQRMDGKGGPYSFQRQ
CCCHHHHHHHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TAWATDGVPLGGYGYPVKPCGLIVSTFRPSDDSTLFGYLIPSNMFAIEILGYLIEIFSLP
CEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
ALKDNDLVVKATKLRDEVQKGLNEHGIINHPKFGKIIAFEVNGYGSFHMMDDANVPSLLS
CCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHC
LPYLGAIAPNDPLYLNTRKVVLSENNPFFYKGKAGEGIGGPHTGVDTIWPMSIVLRAITS
CCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
VDEKEIKACISNLIKTNADTGFMHESFHKDDVNKFTRKWFAWANTLFGEMIVHTSIHYPQ
CCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ILKDKNI
HHCCCCC
>Mature Secondary Structure
MQSRRKFIKNAGIFSAGLLAIQTEAFGFNSDTFQFPLKDFVSKRPPVAERKFTSKAIEAA
CCHHHHHHHHCCCHHHCEEEEEEECCCCCCCCEECCHHHHHCCCCCCHHHHHHHHHHHHH
IVRVKKQIANPELAWIFENCFPNTLDTTVDFEIIDGKPDTYVITGDIDAMWLRDSTAQIW
HHHHHHHHCCCHHEEHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCHHHC
PYIPFVKEDPKLAELVKGVINRQAKCILLDPYANAFYKDFTKESEWKNDLTKMQPGIHER
CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCCCHH
KWEIDSLCYPVRLAHGYWKETGDISLFDAKWKEAMLLILQTFKEQQRMDGKGGPYSFQRQ
CCCHHHHHHHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TAWATDGVPLGGYGYPVKPCGLIVSTFRPSDDSTLFGYLIPSNMFAIEILGYLIEIFSLP
CEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
ALKDNDLVVKATKLRDEVQKGLNEHGIINHPKFGKIIAFEVNGYGSFHMMDDANVPSLLS
CCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHC
LPYLGAIAPNDPLYLNTRKVVLSENNPFFYKGKAGEGIGGPHTGVDTIWPMSIVLRAITS
CCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
VDEKEIKACISNLIKTNADTGFMHESFHKDDVNKFTRKWFAWANTLFGEMIVHTSIHYPQ
CCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ILKDKNI
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA