Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300453

Identifier: 146300453

GI number: 146300453

Start: 3216119

End: 3216952

Strand: Direct

Name: 146300453

Synonym: Fjoh_2703

Alternate gene names: NA

Gene position: 3216119-3216952 (Clockwise)

Preceding gene: 146300452

Following gene: 146300458

Centisome position: 52.75

GC content: 39.33

Gene sequence:

>834_bases
ATGAAAAAACTTTACTTGTCGTTTGTGCTGCTTTTTCCTATTCAGTCTGTTCTTTTCTCTCATTCTGTTCAAGCTTGTGG
ACCTATCGTCACACAGAGCGGTAACGTTAAAAACAATGTCAGTTTATCTCCCGTATTCTCTGATGGGATAGAATATGAAA
GACACCGTGTCTGGCTTAATTTGACCAATTCGCAGGGTTTATTCAAACAGATCTTAATTGCTTATGTGACAGGGGCTACC
AATGGCTACGATCACAATTATGATGCTCCGACCATGGACGCCAATAAGTATGCTGATTTTTTCAGCATTATCGAATCCAA
TAAGCTGGTGATTCAGGGGCGTGCCGTGCCGTTTGATGTCTCCGATACCATTCCTGTGGGATACAGGTCGGAAATTACTG
GAAAGCTGACCATTTCCATTGATCATACCGATGGCGATTTAGATGTGCTGAATATTTACTTAGAAGACAAAGAAACCGGT
ACTATGCATAATTTAAAATCGGGCAGTTATACTTTTTCAACTCTCTCCGGCACGTTTACTGATCGTTTTGTAATCCGCTA
TATAGCAGATAAAAAATTAGGAATAAATGAAATGGAAAAGCAGCTGCAGCATCTCAGCGTGGCTTCAAAAAATCAGGTCA
TCAGTGTAAAATCATTTCCTGCAGCTTTAAAGAAAGTTTCTGTTTTTGATATTACCGGAAAATTACTCTACAGCAGTCCG
CATCTTGGATCTTCCGAACTTGAAATAGCAAACATTCTTACCGGTCCGCAGATTCTACTGGTCAAAACTACCTTAGAAAA
TGAAAATATAGTAACCAGGAAGGTGATTTTTTAA

Upstream 100 bases:

>100_bases
TAAAAGGACGGCTGAGACGTAACTTGACAGCGGTGTAAGGAATTTTAGATTTTTTATTAAATAATTTTTAGTACTGTCAT
TAATTTTAAACTAGGGTCTT

Downstream 100 bases:

>100_bases
GTTTGAAGCATAGAAAAGCGCTAAAAAAAGAAAGGCTTAAAAATTGGCTGCCAAGATGCTGTGCCGACTACCATGAAAGG
GTATGTCTTAGATAGCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLNLTNSQGLFKQILIAYVTGAT
NGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDVSDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETG
TMHNLKSGSYTFSTLSGTFTDRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP
HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF

Sequences:

>Translated_277_residues
MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLNLTNSQGLFKQILIAYVTGAT
NGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDVSDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETG
TMHNLKSGSYTFSTLSGTFTDRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP
HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF
>Mature_277_residues
MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLNLTNSQGLFKQILIAYVTGAT
NGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDVSDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETG
TMHNLKSGSYTFSTLSGTFTDRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP
HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30794; Mature: 30794

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLN
CCHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCCCCEECEECCCCCCEEEEEEEEE
LTNSQGLFKQILIAYVTGATNGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDV
EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEECC
SDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETGTMHNLKSGSYTFSTLSGTFT
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEECCCCCCEEEEEECCCHH
DRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP
HHHHEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHEEEEEEEECEEEECCC
HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF
CCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLN
CCHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCCCCEECEECCCCCCEEEEEEEEE
LTNSQGLFKQILIAYVTGATNGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDV
EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEECC
SDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETGTMHNLKSGSYTFSTLSGTFT
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEECCCCCCEEEEEECCCHH
DRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP
HHHHEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHEEEEEEEECEEEECCC
HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF
CCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA