| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300453
Identifier: 146300453
GI number: 146300453
Start: 3216119
End: 3216952
Strand: Direct
Name: 146300453
Synonym: Fjoh_2703
Alternate gene names: NA
Gene position: 3216119-3216952 (Clockwise)
Preceding gene: 146300452
Following gene: 146300458
Centisome position: 52.75
GC content: 39.33
Gene sequence:
>834_bases ATGAAAAAACTTTACTTGTCGTTTGTGCTGCTTTTTCCTATTCAGTCTGTTCTTTTCTCTCATTCTGTTCAAGCTTGTGG ACCTATCGTCACACAGAGCGGTAACGTTAAAAACAATGTCAGTTTATCTCCCGTATTCTCTGATGGGATAGAATATGAAA GACACCGTGTCTGGCTTAATTTGACCAATTCGCAGGGTTTATTCAAACAGATCTTAATTGCTTATGTGACAGGGGCTACC AATGGCTACGATCACAATTATGATGCTCCGACCATGGACGCCAATAAGTATGCTGATTTTTTCAGCATTATCGAATCCAA TAAGCTGGTGATTCAGGGGCGTGCCGTGCCGTTTGATGTCTCCGATACCATTCCTGTGGGATACAGGTCGGAAATTACTG GAAAGCTGACCATTTCCATTGATCATACCGATGGCGATTTAGATGTGCTGAATATTTACTTAGAAGACAAAGAAACCGGT ACTATGCATAATTTAAAATCGGGCAGTTATACTTTTTCAACTCTCTCCGGCACGTTTACTGATCGTTTTGTAATCCGCTA TATAGCAGATAAAAAATTAGGAATAAATGAAATGGAAAAGCAGCTGCAGCATCTCAGCGTGGCTTCAAAAAATCAGGTCA TCAGTGTAAAATCATTTCCTGCAGCTTTAAAGAAAGTTTCTGTTTTTGATATTACCGGAAAATTACTCTACAGCAGTCCG CATCTTGGATCTTCCGAACTTGAAATAGCAAACATTCTTACCGGTCCGCAGATTCTACTGGTCAAAACTACCTTAGAAAA TGAAAATATAGTAACCAGGAAGGTGATTTTTTAA
Upstream 100 bases:
>100_bases TAAAAGGACGGCTGAGACGTAACTTGACAGCGGTGTAAGGAATTTTAGATTTTTTATTAAATAATTTTTAGTACTGTCAT TAATTTTAAACTAGGGTCTT
Downstream 100 bases:
>100_bases GTTTGAAGCATAGAAAAGCGCTAAAAAAAGAAAGGCTTAAAAATTGGCTGCCAAGATGCTGTGCCGACTACCATGAAAGG GTATGTCTTAGATAGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLNLTNSQGLFKQILIAYVTGAT NGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDVSDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETG TMHNLKSGSYTFSTLSGTFTDRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF
Sequences:
>Translated_277_residues MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLNLTNSQGLFKQILIAYVTGAT NGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDVSDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETG TMHNLKSGSYTFSTLSGTFTDRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF >Mature_277_residues MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLNLTNSQGLFKQILIAYVTGAT NGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDVSDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETG TMHNLKSGSYTFSTLSGTFTDRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30794; Mature: 30794
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLN CCHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCCCCEECEECCCCCCEEEEEEEEE LTNSQGLFKQILIAYVTGATNGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDV EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEECC SDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETGTMHNLKSGSYTFSTLSGTFT CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEECCCCCCEEEEEECCCHH DRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP HHHHEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHEEEEEEEECEEEECCC HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF CCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MKKLYLSFVLLFPIQSVLFSHSVQACGPIVTQSGNVKNNVSLSPVFSDGIEYERHRVWLN CCHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCCCCCCEECEECCCCCCEEEEEEEEE LTNSQGLFKQILIAYVTGATNGYDHNYDAPTMDANKYADFFSIIESNKLVIQGRAVPFDV EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEECC SDTIPVGYRSEITGKLTISIDHTDGDLDVLNIYLEDKETGTMHNLKSGSYTFSTLSGTFT CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEECCCCCCEEEEEECCCHH DRFVIRYIADKKLGINEMEKQLQHLSVASKNQVISVKSFPAALKKVSVFDITGKLLYSSP HHHHEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHEEEEEEEECEEEECCC HLGSSELEIANILTGPQILLVKTTLENENIVTRKVIF CCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA