| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300447
Identifier: 146300447
GI number: 146300447
Start: 3211434
End: 3212141
Strand: Reverse
Name: 146300447
Synonym: Fjoh_2696
Alternate gene names: NA
Gene position: 3212141-3211434 (Counterclockwise)
Preceding gene: 146300448
Following gene: 146300446
Centisome position: 52.69
GC content: 33.05
Gene sequence:
>708_bases ATGAGACCAATTAATAAAGGAATTTCACCCCAAGTTTTTGCAGAATATGAAGATGCAAAACGACCTTTGGTTGATAGAAT TGGCACCTATTGTTCTTATTGTGAAAGACAAATAGCAACCAATTTAGCAATTGAACATATTTTTCCAAAAGACGATACAT TGGGTTACAGTCATCTTAGAGAAAATTGGGATAATTTTTTATTAGCTTGTGTCAATTGTAATTCAGCAAAAAGAGTTAAA ATTATAAATGAGGCAACCTATTTGCTACCAGATAGAGACAATACCTTCATTGGTTTTGAGTATTTAGAAACTGGAGAGGT TATTGCTACAAGTGTTGCACCAATAGATACTATGGCTCAAAATACGATCGATTTGGTAAATCTAAACATTGATGAGGAAG ATTTAATAGATGAAACTAAACTTTTTACAGCCTTACTAAGATCAGGTCAAAGAGTACAAGCTTGGATACAGGCGAAAGAA GCGCTGAATGATTATAATAATGGGGAAGTTAATATTCGAAGAATAGTTAGAGAAGCACAGTCAATAGGTTTCTTTTCTAT TTGGATGAAAGCATTTGAAGGCGTTCCTGCTGTTCGACAAGAATTAATCAATACTTTTATAGGCACAGAAACTAGCTGTT TTGATGTAAATACAAATTCAATTACACCAAGACTAGCCAATCACTTAAATCATTCAGGAAAAGTATGA
Upstream 100 bases:
>100_bases AGAAAATCTGAAATTCAAGTAGAATTAGCTCAATTGTTAGCTCCATTTTCAGATAATCCAGCCTATATAGCATTATTAGA AAGTAAAGGTATTATTACAG
Downstream 100 bases:
>100_bases GAAATAACCAAACTAAAGAAATAGCTTTTGAAAAGTGTATAGAAACCGTATTGCTTGCCACAGGTTACAAAACTATAGCT AGTAGCAGTTATGACAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLRENWDNFLLACVNCNSAKRVK IINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQNTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKE ALNDYNNGEVNIRRIVREAQSIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV
Sequences:
>Translated_235_residues MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLRENWDNFLLACVNCNSAKRVK IINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQNTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKE ALNDYNNGEVNIRRIVREAQSIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV >Mature_235_residues MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLRENWDNFLLACVNCNSAKRVK IINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQNTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKE ALNDYNNGEVNIRRIVREAQSIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26665; Mature: 26665
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLR CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ENWDNFLLACVNCNSAKRVKIINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQ HCHHHEEEEEECCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCCCHHHCCCCHHHHHH NTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKEALNDYNNGEVNIRRIVREAQ CCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV HCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLR CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ENWDNFLLACVNCNSAKRVKIINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQ HCHHHEEEEEECCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCCCHHHCCCCHHHHHH NTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKEALNDYNNGEVNIRRIVREAQ CCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV HCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA