Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300447

Identifier: 146300447

GI number: 146300447

Start: 3211434

End: 3212141

Strand: Reverse

Name: 146300447

Synonym: Fjoh_2696

Alternate gene names: NA

Gene position: 3212141-3211434 (Counterclockwise)

Preceding gene: 146300448

Following gene: 146300446

Centisome position: 52.69

GC content: 33.05

Gene sequence:

>708_bases
ATGAGACCAATTAATAAAGGAATTTCACCCCAAGTTTTTGCAGAATATGAAGATGCAAAACGACCTTTGGTTGATAGAAT
TGGCACCTATTGTTCTTATTGTGAAAGACAAATAGCAACCAATTTAGCAATTGAACATATTTTTCCAAAAGACGATACAT
TGGGTTACAGTCATCTTAGAGAAAATTGGGATAATTTTTTATTAGCTTGTGTCAATTGTAATTCAGCAAAAAGAGTTAAA
ATTATAAATGAGGCAACCTATTTGCTACCAGATAGAGACAATACCTTCATTGGTTTTGAGTATTTAGAAACTGGAGAGGT
TATTGCTACAAGTGTTGCACCAATAGATACTATGGCTCAAAATACGATCGATTTGGTAAATCTAAACATTGATGAGGAAG
ATTTAATAGATGAAACTAAACTTTTTACAGCCTTACTAAGATCAGGTCAAAGAGTACAAGCTTGGATACAGGCGAAAGAA
GCGCTGAATGATTATAATAATGGGGAAGTTAATATTCGAAGAATAGTTAGAGAAGCACAGTCAATAGGTTTCTTTTCTAT
TTGGATGAAAGCATTTGAAGGCGTTCCTGCTGTTCGACAAGAATTAATCAATACTTTTATAGGCACAGAAACTAGCTGTT
TTGATGTAAATACAAATTCAATTACACCAAGACTAGCCAATCACTTAAATCATTCAGGAAAAGTATGA

Upstream 100 bases:

>100_bases
AGAAAATCTGAAATTCAAGTAGAATTAGCTCAATTGTTAGCTCCATTTTCAGATAATCCAGCCTATATAGCATTATTAGA
AAGTAAAGGTATTATTACAG

Downstream 100 bases:

>100_bases
GAAATAACCAAACTAAAGAAATAGCTTTTGAAAAGTGTATAGAAACCGTATTGCTTGCCACAGGTTACAAAACTATAGCT
AGTAGCAGTTATGACAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLRENWDNFLLACVNCNSAKRVK
IINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQNTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKE
ALNDYNNGEVNIRRIVREAQSIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV

Sequences:

>Translated_235_residues
MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLRENWDNFLLACVNCNSAKRVK
IINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQNTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKE
ALNDYNNGEVNIRRIVREAQSIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV
>Mature_235_residues
MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLRENWDNFLLACVNCNSAKRVK
IINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQNTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKE
ALNDYNNGEVNIRRIVREAQSIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26665; Mature: 26665

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLR
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ENWDNFLLACVNCNSAKRVKIINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQ
HCHHHEEEEEECCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCCCHHHCCCCHHHHHH
NTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKEALNDYNNGEVNIRRIVREAQ
CCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV
HCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MRPINKGISPQVFAEYEDAKRPLVDRIGTYCSYCERQIATNLAIEHIFPKDDTLGYSHLR
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ENWDNFLLACVNCNSAKRVKIINEATYLLPDRDNTFIGFEYLETGEVIATSVAPIDTMAQ
HCHHHEEEEEECCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCCCHHHCCCCHHHHHH
NTIDLVNLNIDEEDLIDETKLFTALLRSGQRVQAWIQAKEALNDYNNGEVNIRRIVREAQ
CCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SIGFFSIWMKAFEGVPAVRQELINTFIGTETSCFDVNTNSITPRLANHLNHSGKV
HCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA