Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is yhhH [C]

Identifier: 146300430

GI number: 146300430

Start: 3189064

End: 3189411

Strand: Direct

Name: yhhH [C]

Synonym: Fjoh_2679

Alternate gene names: 146300430

Gene position: 3189064-3189411 (Clockwise)

Preceding gene: 146300429

Following gene: 146300431

Centisome position: 52.31

GC content: 30.75

Gene sequence:

>348_bases
ATGAAAAAGCATAATGTATTATTAGTGGTTTTTTTATTAATATTCTTTAATTCGTGCTCCCAAGAGAAAACCAAGTCGCA
AAAGGTAGTAAAATCTGTGGTAGATAAACCTAATTTGGTATTTAAGGATTTAGTTCCTGATAATGAAACTGCAATAAAAA
TAGCTGAAGCTATTTTAGTGCCTATATATGGTAAAAAGATTTATAAACAGAGACCGTTTGTAGCAACGTTGAAGTCACCA
AATGTGTGGGCTGTAGAAGGAACATTACATACAACAAAAGGTGGTGTTGCTTACATAGAGATACAGAAGAAAGATTGTAA
AATATTGAAAGTTTATCATGAAAAATGA

Upstream 100 bases:

>100_bases
CAACTACGGATAGTAAACAAAAAACAAATACTAATATTTGGCCAGTAATTAAGCCTTTAATTCCAACAATTCCAGCTAAA
TAAACTTAAATTTTAAAAAT

Downstream 100 bases:

>100_bases
TAAAGTAAAATAGTTATAACATAGCTTGATAATTTGGGTAGTGTTTCAGATTAGGTGTTTTGATAATATATCCATGTAAC
TAACTGAAAAAGAATATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKKHNVLLVVFLLIFFNSCSQEKTKSQKVVKSVVDKPNLVFKDLVPDNETAIKIAEAILVPIYGKKIYKQRPFVATLKSP
NVWAVEGTLHTTKGGVAYIEIQKKDCKILKVYHEK

Sequences:

>Translated_115_residues
MKKHNVLLVVFLLIFFNSCSQEKTKSQKVVKSVVDKPNLVFKDLVPDNETAIKIAEAILVPIYGKKIYKQRPFVATLKSP
NVWAVEGTLHTTKGGVAYIEIQKKDCKILKVYHEK
>Mature_115_residues
MKKHNVLLVVFLLIFFNSCSQEKTKSQKVVKSVVDKPNLVFKDLVPDNETAIKIAEAILVPIYGKKIYKQRPFVATLKSP
NVWAVEGTLHTTKGGVAYIEIQKKDCKILKVYHEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13071; Mature: 13071

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHNVLLVVFLLIFFNSCSQEKTKSQKVVKSVVDKPNLVFKDLVPDNETAIKIAEAILV
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC
PIYGKKIYKQRPFVATLKSPNVWAVEGTLHTTKGGVAYIEIQKKDCKILKVYHEK
CCCCHHHHHCCCEEEEECCCCEEEEECEEEECCCCEEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MKKHNVLLVVFLLIFFNSCSQEKTKSQKVVKSVVDKPNLVFKDLVPDNETAIKIAEAILV
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC
PIYGKKIYKQRPFVATLKSPNVWAVEGTLHTTKGGVAYIEIQKKDCKILKVYHEK
CCCCHHHHHCCCEEEEECCCCEEEEECEEEECCCCEEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA