Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is hnr [C]

Identifier: 146300404

GI number: 146300404

Start: 3152376

End: 3153104

Strand: Direct

Name: hnr [C]

Synonym: Fjoh_2652

Alternate gene names: 146300404

Gene position: 3152376-3153104 (Clockwise)

Preceding gene: 146300396

Following gene: 146300406

Centisome position: 51.7

GC content: 40.6

Gene sequence:

>729_bases
ATGCTGCAGTTTAAGCAGAAAGCCTTTATTCAGAATTTACAGCAGGGTCTGCAGTTCTTTTTTTTTGCACCGGCGCTGCA
GCATATTCGGAACAGGCATTTCAGCCCACATAAATCATCTTTTTTTTTGCAAGTTTTTTCTTTTAAAAAAAAAAAGAGTT
ATCTTTACAGCTACCACCAAAAAAATGTAAATCTTCTTTCCAACCTAACCCTAAGTTTATTTTCTAACCGCTGCGACTTT
CAGATCTATCTGTCTGGCCGCACTATAAATTTAAAAGTTATGCCGCAAAAGCAGAATTGGGAGAAAATTATTTATCTGGC
TGAAGATGACGAAGATGACAGACTGCTGTTTGCTGATGCTGTCGAAGAATTAAACCTGCCCATTTTGGTAGTGCAGACGG
CAGACGGCTGCGAACTGCTGGAAACCCTTGAAAAGGCGACGCATCTTCCTGAAACGATATTTCTGGATATCAATATGCCC
CGAAAAAACGGATTTGAATGCCTTAAAGAAATTCGAAACGGCGGCAGCGATTTCAAAAATATAAAGATTATCATGCTGTC
CACCAGCAGCAGTGCGATGCATATCCGGACCGCCTATAATCTCGGGGCGGATTATTATGCCGTAAAACCGCCTACCTTTA
TGGAATTGAAAGATCTTTTAATAGGGATTTTGGACAGGGACCTAAAAAGCTTAAGAAAAGAGATGGAAAAAAAACTGCCC
GCCTGCTAA

Upstream 100 bases:

>100_bases
ACCTGTCAAAATTAGTACAGATAATAACAATTTTATGAAAACATAATGTTCTAAATAGTAACAAAAAATAGAAGCACTGA
TTTTACAGGCGGTCTTGATT

Downstream 100 bases:

>100_bases
AGATAAAAATAATGATGAGGATCTGAATGCTTGCGGATCTTTAATCAGACAAGATCTTACAGGACGGGGCTTTATTTTTC
AGGGACAGTTTCTTTTTCAG

Product: response regulator receiver protein

Products: NA

Alternate protein names: Response Regulator CheY; Response Regulator; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; FOG CheY-Like Receiver; CheY-Like Receiver Protein; Response Regulator CheY-Like; Chemotaxis Response Regulator Protein; Two-Component System Response Regulator; Response Regulator For Gln

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLQFKQKAFIQNLQQGLQFFFFAPALQHIRNRHFSPHKSSFFLQVFSFKKKKSYLYSYHQKNVNLLSNLTLSLFSNRCDF
QIYLSGRTINLKVMPQKQNWEKIIYLAEDDEDDRLLFADAVEELNLPILVVQTADGCELLETLEKATHLPETIFLDINMP
RKNGFECLKEIRNGGSDFKNIKIIMLSTSSSAMHIRTAYNLGADYYAVKPPTFMELKDLLIGILDRDLKSLRKEMEKKLP
AC

Sequences:

>Translated_242_residues
MLQFKQKAFIQNLQQGLQFFFFAPALQHIRNRHFSPHKSSFFLQVFSFKKKKSYLYSYHQKNVNLLSNLTLSLFSNRCDF
QIYLSGRTINLKVMPQKQNWEKIIYLAEDDEDDRLLFADAVEELNLPILVVQTADGCELLETLEKATHLPETIFLDINMP
RKNGFECLKEIRNGGSDFKNIKIIMLSTSSSAMHIRTAYNLGADYYAVKPPTFMELKDLLIGILDRDLKSLRKEMEKKLP
AC
>Mature_242_residues
MLQFKQKAFIQNLQQGLQFFFFAPALQHIRNRHFSPHKSSFFLQVFSFKKKKSYLYSYHQKNVNLLSNLTLSLFSNRCDF
QIYLSGRTINLKVMPQKQNWEKIIYLAEDDEDDRLLFADAVEELNLPILVVQTADGCELLETLEKATHLPETIFLDINMP
RKNGFECLKEIRNGGSDFKNIKIIMLSTSSSAMHIRTAYNLGADYYAVKPPTFMELKDLLIGILDRDLKSLRKEMEKKLP
AC

Specific function: Unknown

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28171; Mature: 28171

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQFKQKAFIQNLQQGLQFFFFAPALQHIRNRHFSPHKSSFFLQVFSFKKKKSYLYSYHQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KNVNLLSNLTLSLFSNRCDFQIYLSGRTINLKVMPQKQNWEKIIYLAEDDEDDRLLFADA
CCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEHH
VEELNLPILVVQTADGCELLETLEKATHLPETIFLDINMPRKNGFECLKEIRNGGSDFKN
HHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCE
IKIIMLSTSSSAMHIRTAYNLGADYYAVKPPTFMELKDLLIGILDRDLKSLRKEMEKKLP
EEEEEEECCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AC
CC
>Mature Secondary Structure
MLQFKQKAFIQNLQQGLQFFFFAPALQHIRNRHFSPHKSSFFLQVFSFKKKKSYLYSYHQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KNVNLLSNLTLSLFSNRCDFQIYLSGRTINLKVMPQKQNWEKIIYLAEDDEDDRLLFADA
CCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEHH
VEELNLPILVVQTADGCELLETLEKATHLPETIFLDINMPRKNGFECLKEIRNGGSDFKN
HHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCE
IKIIMLSTSSSAMHIRTAYNLGADYYAVKPPTFMELKDLLIGILDRDLKSLRKEMEKKLP
EEEEEEECCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA