| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300389
Identifier: 146300389
GI number: 146300389
Start: 3132450
End: 3133199
Strand: Direct
Name: 146300389
Synonym: Fjoh_2634
Alternate gene names: NA
Gene position: 3132450-3133199 (Clockwise)
Preceding gene: 146300388
Following gene: 146300390
Centisome position: 51.38
GC content: 38.53
Gene sequence:
>750_bases ATGAAAATAAAGTACTTCGAATATATTGCAGTTTACCTGTCTGTTTTTTTAGTCTGTGTCTTTGTCGGTGCAATCGGAAG ACTGGTGCTTCTGGAAAAAGGTGCGGATGAATATACGGCCGGCGTTTTCTTTTGGATCAGCACTGGATTTGGAGTTTTAA TGTTTGCAATTCTAAGTTTGTTTCTAAACGGTTTGGCCGAGAGATTGGTGAATCGTTTTTTGAAGACTGAAAAAAAGCAA TCGCCTGAAAGCTTCATTACAAGTGAGGATCTTGTAAAAATAGAAGAAGGGCTTGATAATAATTTAATTACGCCCAAAAT GCCTGAAAATAAAAATGCTGCCATTGACATTCAGAAGATAAGGGAGGAGCGGCAAAATGCAGCCAGAAATCAAAAACAGG CCAGAATTGATACAGCCATCCGTTATGCGCATAAGGAGTTTGCGCCGTATGTGTCGGATCATGATCTGGAGCAGTTGGGC AGCAATATACTCATATATGCTGAAGGCCTAAATTTTGAAAAGATTAAACCGGTAAAAGTAAAAGAGCTGTCCAATCTGGA TCTGTATCATTTTGGCTGGAATATCTGGAATTATTTTAAAGTCAGCAGACAAGACACAGCCGCACAATTTCTAAAGCTCA CTTTTACTGAAGCTTTAAAAGATGTCGAGCAGAAGAGCATTAAAACGCATCTCAAAGATGATGAACAGAAAGGGCTTTTA AAGATTATGGAGGATCTTGCAGATTTTTAA
Upstream 100 bases:
>100_bases CCAACGTAAAAACTACTCAAATCTACGCCAAAGTAATAGATGAGAAGAAAAACAGAGCTTCGCAGGCAATACAATTGGAA TCTTTAAAGAAAAGAGCGCA
Downstream 100 bases:
>100_bases ATACTAATAGATATTGGCATTAAGCGCCGTGTTTTTCAAGTGTTTCTGCTTTGAAGAGCGACACAGCAGAAACACTTTTT TCATTTGCACCATAACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Mobilizable Transposon Protein TnpC Protein
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKIKYFEYIAVYLSVFLVCVFVGAIGRLVLLEKGADEYTAGVFFWISTGFGVLMFAILSLFLNGLAERLVNRFLKTEKKQ SPESFITSEDLVKIEEGLDNNLITPKMPENKNAAIDIQKIREERQNAARNQKQARIDTAIRYAHKEFAPYVSDHDLEQLG SNILIYAEGLNFEKIKPVKVKELSNLDLYHFGWNIWNYFKVSRQDTAAQFLKLTFTEALKDVEQKSIKTHLKDDEQKGLL KIMEDLADF
Sequences:
>Translated_249_residues MKIKYFEYIAVYLSVFLVCVFVGAIGRLVLLEKGADEYTAGVFFWISTGFGVLMFAILSLFLNGLAERLVNRFLKTEKKQ SPESFITSEDLVKIEEGLDNNLITPKMPENKNAAIDIQKIREERQNAARNQKQARIDTAIRYAHKEFAPYVSDHDLEQLG SNILIYAEGLNFEKIKPVKVKELSNLDLYHFGWNIWNYFKVSRQDTAAQFLKLTFTEALKDVEQKSIKTHLKDDEQKGLL KIMEDLADF >Mature_249_residues MKIKYFEYIAVYLSVFLVCVFVGAIGRLVLLEKGADEYTAGVFFWISTGFGVLMFAILSLFLNGLAERLVNRFLKTEKKQ SPESFITSEDLVKIEEGLDNNLITPKMPENKNAAIDIQKIREERQNAARNQKQARIDTAIRYAHKEFAPYVSDHDLEQLG SNILIYAEGLNFEKIKPVKVKELSNLDLYHFGWNIWNYFKVSRQDTAAQFLKLTFTEALKDVEQKSIKTHLKDDEQKGLL KIMEDLADF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28701; Mature: 28701
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKYFEYIAVYLSVFLVCVFVGAIGRLVLLEKGADEYTAGVFFWISTGFGVLMFAILSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLNGLAERLVNRFLKTEKKQSPESFITSEDLVKIEEGLDNNLITPKMPENKNAAIDIQKI HHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHH REERQNAARNQKQARIDTAIRYAHKEFAPYVSDHDLEQLGSNILIYAEGLNFEKIKPVKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCHH KELSNLDLYHFGWNIWNYFKVSRQDTAAQFLKLTFTEALKDVEQKSIKTHLKDDEQKGLL HHHCCCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIMEDLADF HHHHHHHCC >Mature Secondary Structure MKIKYFEYIAVYLSVFLVCVFVGAIGRLVLLEKGADEYTAGVFFWISTGFGVLMFAILSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLNGLAERLVNRFLKTEKKQSPESFITSEDLVKIEEGLDNNLITPKMPENKNAAIDIQKI HHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHH REERQNAARNQKQARIDTAIRYAHKEFAPYVSDHDLEQLGSNILIYAEGLNFEKIKPVKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCHH KELSNLDLYHFGWNIWNYFKVSRQDTAAQFLKLTFTEALKDVEQKSIKTHLKDDEQKGLL HHHCCCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIMEDLADF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA