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The map label for this gene is modF [H]

Identifier: 146300377

GI number: 146300377

Start: 3117448

End: 3118689

Strand: Reverse

Name: modF [H]

Synonym: Fjoh_2622

Alternate gene names: 146300377

Gene position: 3118689-3117448 (Counterclockwise)

Preceding gene: 146300378

Following gene: 146300376

Centisome position: 51.15

GC content: 33.74

Gene sequence:

>1242_bases
ATGCAGCACTGGGATATACTTTTATCTAATCAGGTAGATAAAAAAGCTTTTATAGACAGCATACTTAACGGCGAAGCAAA
AGGAGAATTAGCCGTTTTTAATAATCAAAAAGGAATTTTGTTCTCTGATATCGCAATCGAAAAATTCATTGAAAAAGAAT
ACCAATACGACAGCGTAGAAGCTTCTCCAGAATCGCACAGGCAATTACGAACTTTTTCATCTGGAGAACGCAAAAAAGAA
TTTTTAAAATACTGCATTAATCAAAAACCGGATTTTATCATTTTTGATAATCCGTTTGATCATTTAGATCAGGCTTCGAG
AGTAATTTTAGCCGATTCTTTAAAAGATTTAATCCAGGATATTGCCATAATTCAGCTTTTGAACCGTGTAGTTGATGTTC
TTGAATTTGTGCCTAATAAAGCACTAATTAAAGATAATACTTTTGAGTTTCACCCAATTTCAAAAACCGAAAATCATTTT
AAAACCTTAAATACAGCGGCAATTCCAAAAGCGATTGAACCGCATTCTTTTCACGAAAGTGTATTAATAAAACTGGAAAA
TATTTCGGTTAGTTATGATGAAAGAAAAATTATAGACAATATTTCGTGGACTATAAAACAAGGTGAATTCTGGCAGTTAA
TTGGCCCGAATGGCTCAGGAAAAAGCACAATTTTATCCTTAATTACAGGAGATAATCCAAAAGGATTTGGACAGGATTTG
TATTTGTTTGGAAGAAAAAAAGGCACCGGAGAAAGTGTCTGGGACATTAAAAAGCAAATCGGAATTTATACAACTTCTAT
GATGGATTTATTTCAAAAAGGCCACACTGTGGAGCAAATGATTCTTTCTGGATTTTTCGATCAGATCGGACTTTATACTG
AGCCGACAACACATCAACAAAATATAGTTTCGCAATGGCTTGAGGTAATTGAAATGAGCCATTTAAGAAAAAAACGTTTT
ATAGATTTAACACTGGGCCAGCAAAGAGTTGCCTTAATTGTTCGTGCTGTTTTAAAACATCCGCCTTTATTAATTCTGGA
TGAACCTGTAGAAGGTTTAGACGACGAAAATGTCGATTTGGTAATTCAGCTTATCAATACCATAAAACAGCAGACAAAGG
TGACGATTTTATATGTTTCTCACAGAATAGAACAAGGTCTTGCTCCTACTTCGGTATTTGAACTTTTACCAGCACCAACA
GGATCAATTGGTAACATAAAATACCATTCAGAATTAAATTAA

Upstream 100 bases:

>100_bases
TTTGTTAATGCAAGTGAAACGCCTTTATTTAAGTTTCAAAAAGCTATGTTACTATGTGTTAAAAATGCTTAAAACAGTTT
AAAAAATAGAAAACACAAAA

Downstream 100 bases:

>100_bases
AACATAATGAAACTCAAAATAATTGGAATATTGATCCTGCAGTTTTTACTGTTTTCATGTTCCGGCACAATTTCAACAGT
AAAGAAAGAATATAAGCTTT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: Photorepair protein PhrA [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MQHWDILLSNQVDKKAFIDSILNGEAKGELAVFNNQKGILFSDIAIEKFIEKEYQYDSVEASPESHRQLRTFSSGERKKE
FLKYCINQKPDFIIFDNPFDHLDQASRVILADSLKDLIQDIAIIQLLNRVVDVLEFVPNKALIKDNTFEFHPISKTENHF
KTLNTAAIPKAIEPHSFHESVLIKLENISVSYDERKIIDNISWTIKQGEFWQLIGPNGSGKSTILSLITGDNPKGFGQDL
YLFGRKKGTGESVWDIKKQIGIYTTSMMDLFQKGHTVEQMILSGFFDQIGLYTEPTTHQQNIVSQWLEVIEMSHLRKKRF
IDLTLGQQRVALIVRAVLKHPPLLILDEPVEGLDDENVDLVIQLINTIKQQTKVTILYVSHRIEQGLAPTSVFELLPAPT
GSIGNIKYHSELN

Sequences:

>Translated_413_residues
MQHWDILLSNQVDKKAFIDSILNGEAKGELAVFNNQKGILFSDIAIEKFIEKEYQYDSVEASPESHRQLRTFSSGERKKE
FLKYCINQKPDFIIFDNPFDHLDQASRVILADSLKDLIQDIAIIQLLNRVVDVLEFVPNKALIKDNTFEFHPISKTENHF
KTLNTAAIPKAIEPHSFHESVLIKLENISVSYDERKIIDNISWTIKQGEFWQLIGPNGSGKSTILSLITGDNPKGFGQDL
YLFGRKKGTGESVWDIKKQIGIYTTSMMDLFQKGHTVEQMILSGFFDQIGLYTEPTTHQQNIVSQWLEVIEMSHLRKKRF
IDLTLGQQRVALIVRAVLKHPPLLILDEPVEGLDDENVDLVIQLINTIKQQTKVTILYVSHRIEQGLAPTSVFELLPAPT
GSIGNIKYHSELN
>Mature_413_residues
MQHWDILLSNQVDKKAFIDSILNGEAKGELAVFNNQKGILFSDIAIEKFIEKEYQYDSVEASPESHRQLRTFSSGERKKE
FLKYCINQKPDFIIFDNPFDHLDQASRVILADSLKDLIQDIAIIQLLNRVVDVLEFVPNKALIKDNTFEFHPISKTENHF
KTLNTAAIPKAIEPHSFHESVLIKLENISVSYDERKIIDNISWTIKQGEFWQLIGPNGSGKSTILSLITGDNPKGFGQDL
YLFGRKKGTGESVWDIKKQIGIYTTSMMDLFQKGHTVEQMILSGFFDQIGLYTEPTTHQQNIVSQWLEVIEMSHLRKKRF
IDLTLGQQRVALIVRAVLKHPPLLILDEPVEGLDDENVDLVIQLINTIKQQTKVTILYVSHRIEQGLAPTSVFELLPAPT
GSIGNIKYHSELN

Specific function: Involved in the transport of molybdenum into the cell. Involved in photorepair. Could act on UV-induced DNA damage other than pyrimidine dimers [H]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=215, Percent_Identity=26.046511627907, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI30795238, Length=215, Percent_Identity=26.046511627907, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1786975, Length=454, Percent_Identity=35.4625550660793, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI1790544, Length=216, Percent_Identity=26.8518518518519, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1789991, Length=206, Percent_Identity=27.1844660194175, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI48994943, Length=361, Percent_Identity=24.3767313019391, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081791, Length=228, Percent_Identity=30.7017543859649, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788506, Length=347, Percent_Identity=23.0547550432277, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790739, Length=217, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=29.1079812206573, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=29.4392523364486, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87082268, Length=211, Percent_Identity=27.9620853080569, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789586, Length=214, Percent_Identity=28.5046728971963, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786319, Length=159, Percent_Identity=30.188679245283, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=213, Percent_Identity=24.4131455399061, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788053, Length=221, Percent_Identity=25.7918552036199, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787089, Length=213, Percent_Identity=24.4131455399061, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786803, Length=214, Percent_Identity=24.7663551401869, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788897, Length=188, Percent_Identity=25, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788210, Length=212, Percent_Identity=23.5849056603774, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788540, Length=216, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=211, Percent_Identity=27.9620853080569, Blast_Score=68, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6320266, Length=386, Percent_Identity=22.7979274611399, Blast_Score=94, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24581191, Length=220, Percent_Identity=22.2727272727273, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581189, Length=220, Percent_Identity=22.2727272727273, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581193, Length=220, Percent_Identity=22.2727272727273, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581195, Length=220, Percent_Identity=22.2727272727273, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 47070; Mature: 47070

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHWDILLSNQVDKKAFIDSILNGEAKGELAVFNNQKGILFSDIAIEKFIEKEYQYDSVE
CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCC
ASPESHRQLRTFSSGERKKEFLKYCINQKPDFIIFDNPFDHLDQASRVILADSLKDLIQD
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
IAIIQLLNRVVDVLEFVPNKALIKDNTFEFHPISKTENHFKTLNTAAIPKAIEPHSFHES
HHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCE
VLIKLENISVSYDERKIIDNISWTIKQGEFWQLIGPNGSGKSTILSLITGDNPKGFGQDL
EEEEEECCEECCCHHHHHCCCCEEEECCCEEEEECCCCCCHHHEEEEEECCCCCCCCCCE
YLFGRKKGTGESVWDIKKQIGIYTTSMMDLFQKGHTVEQMILSGFFDQIGLYTEPTTHQQ
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHH
NIVSQWLEVIEMSHLRKKRFIDLTLGQQRVALIVRAVLKHPPLLILDEPVEGLDDENVDL
HHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHH
VIQLINTIKQQTKVTILYVSHRIEQGLAPTSVFELLPAPTGSIGNIKYHSELN
HHHHHHHHHHHHEEEEEEEEHHHHHCCCHHHHHHHCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MQHWDILLSNQVDKKAFIDSILNGEAKGELAVFNNQKGILFSDIAIEKFIEKEYQYDSVE
CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCC
ASPESHRQLRTFSSGERKKEFLKYCINQKPDFIIFDNPFDHLDQASRVILADSLKDLIQD
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
IAIIQLLNRVVDVLEFVPNKALIKDNTFEFHPISKTENHFKTLNTAAIPKAIEPHSFHES
HHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCE
VLIKLENISVSYDERKIIDNISWTIKQGEFWQLIGPNGSGKSTILSLITGDNPKGFGQDL
EEEEEECCEECCCHHHHHCCCCEEEECCCEEEEECCCCCCHHHEEEEEECCCCCCCCCCE
YLFGRKKGTGESVWDIKKQIGIYTTSMMDLFQKGHTVEQMILSGFFDQIGLYTEPTTHQQ
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHH
NIVSQWLEVIEMSHLRKKRFIDLTLGQQRVALIVRAVLKHPPLLILDEPVEGLDDENVDL
HHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHH
VIQLINTIKQQTKVTILYVSHRIEQGLAPTSVFELLPAPTGSIGNIKYHSELN
HHHHHHHHHHHHEEEEEEEEHHHHHCCCHHHHHHHCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8564363; 8550508; 8905232; 9278503; 8310005 [H]