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The map label for this gene is psd [H]

Identifier: 146300352

GI number: 146300352

Start: 3092509

End: 3093162

Strand: Reverse

Name: psd [H]

Synonym: Fjoh_2597

Alternate gene names: 146300352

Gene position: 3093162-3092509 (Counterclockwise)

Preceding gene: 146300353

Following gene: 146300351

Centisome position: 50.73

GC content: 34.1

Gene sequence:

>654_bases
ATGTTTCATAAAGAAGGAGGCCCGTCTATTTTATTAGGTGTAATTTTCACTGTTGTTGTGGTTTTATTAGCTGACCAGTT
TATTGATATCTATTGGCTGCAAAAACTAGTGCAGATTTTTGCTTTAGTAATTTTAATTATCATTCTGCAATTTTTTAGAA
ATCCTAAAAGAATCGCTGTTAGAAATATCGAGCATGTTCTTGCTCCGGTAGATGGAAAAGTTGTAGTTATTGAAGAAGTT
TACGAAGGTGAATATTTTAAAGATAAACGTTTACAGGTTTCTATCTTTATGTCGCCAATCAACGTTCACGTTACACGTTA
TGCGATGGACGGAATTATAAAATTCAGTAAATATCATCCTGGAAAATTTTTGGTTGCATGGCACCCAAAAGCCAGCGAAG
AAAATGAAAGAACGACTGTAGTTATCGAAAACGATACTTTTGGCGCTATTCTTTACAGACAAATTGCAGGAGCCTTGGCA
CGACGAATTGTAAATTATGCTAAAGAAGGAATGCAGGTTGTACAAGGAACAGATGCAGGATTTATTAAATTTGGATCGAG
AGTAGATTTATTTTTACCTTTAGGTACACCAATAAATGTTGTTTTAGGACAAAAAGCAATTGGCGGTAAAACTATTATTG
CTACAAAAGCATAA

Upstream 100 bases:

>100_bases
AGCGGCTCAATTATGCCCGGACACGGAGGTATACTAGATCGATTAGATAGTGTTATATTTGTAGCACCAATTATATTTTT
ATTTTATCAAATTTTATATT

Downstream 100 bases:

>100_bases
ATGGCAGACAAAGATTTAGATAAACGTTTTTCTGAGGCTGTAGAGATTGCAATGAATATGACTCAGGCCTCGCTGCCGCA
AGATGTGCAGCTAAGACTTT

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MFHKEGGPSILLGVIFTVVVVLLADQFIDIYWLQKLVQIFALVILIIILQFFRNPKRIAVRNIEHVLAPVDGKVVVIEEV
YEGEYFKDKRLQVSIFMSPINVHVTRYAMDGIIKFSKYHPGKFLVAWHPKASEENERTTVVIENDTFGAILYRQIAGALA
RRIVNYAKEGMQVVQGTDAGFIKFGSRVDLFLPLGTPINVVLGQKAIGGKTIIATKA

Sequences:

>Translated_217_residues
MFHKEGGPSILLGVIFTVVVVLLADQFIDIYWLQKLVQIFALVILIIILQFFRNPKRIAVRNIEHVLAPVDGKVVVIEEV
YEGEYFKDKRLQVSIFMSPINVHVTRYAMDGIIKFSKYHPGKFLVAWHPKASEENERTTVVIENDTFGAILYRQIAGALA
RRIVNYAKEGMQVVQGTDAGFIKFGSRVDLFLPLGTPINVVLGQKAIGGKTIIATKA
>Mature_217_residues
MFHKEGGPSILLGVIFTVVVVLLADQFIDIYWLQKLVQIFALVILIIILQFFRNPKRIAVRNIEHVLAPVDGKVVVIEEV
YEGEYFKDKRLQVSIFMSPINVHVTRYAMDGIIKFSKYHPGKFLVAWHPKASEENERTTVVIENDTFGAILYRQIAGALA
RRIVNYAKEGMQVVQGTDAGFIKFGSRVDLFLPLGTPINVVLGQKAIGGKTIIATKA

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 24341; Mature: 24341

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHKEGGPSILLGVIFTVVVVLLADQFIDIYWLQKLVQIFALVILIIILQFFRNPKRIAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RNIEHVLAPVDGKVVVIEEVYEGEYFKDKRLQVSIFMSPINVHVTRYAMDGIIKFSKYHP
HHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEHHHHHHHHEECCCCC
GKFLVAWHPKASEENERTTVVIENDTFGAILYRQIAGALARRIVNYAKEGMQVVQGTDAG
CEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FIKFGSRVDLFLPLGTPINVVLGQKAIGGKTIIATKA
EEEECCEEEEEEECCCCEEEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MFHKEGGPSILLGVIFTVVVVLLADQFIDIYWLQKLVQIFALVILIIILQFFRNPKRIAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RNIEHVLAPVDGKVVVIEEVYEGEYFKDKRLQVSIFMSPINVHVTRYAMDGIIKFSKYHP
HHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEHHHHHHHHEECCCCC
GKFLVAWHPKASEENERTTVVIENDTFGAILYRQIAGALARRIVNYAKEGMQVVQGTDAG
CEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FIKFGSRVDLFLPLGTPINVVLGQKAIGGKTIIATKA
EEEECCEEEEEEECCCCEEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA