| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300335
Identifier: 146300335
GI number: 146300335
Start: 3069330
End: 3070697
Strand: Direct
Name: 146300335
Synonym: Fjoh_2580
Alternate gene names: NA
Gene position: 3069330-3070697 (Clockwise)
Preceding gene: 146300334
Following gene: 146300339
Centisome position: 50.34
GC content: 30.26
Gene sequence:
>1368_bases ATGAATTCTGAAATAACATATCAAATACAAAGAATCAAAAAGAAGCTGCTTTTAGCAAAAGAAATTGATAAGGATTTAGA AGTTTTTGGAGCAGATAGTCATGTATATGTTCTAAGTGAAACGGCAGCTGTTGATGATATTTTTGAATTTGAAAAAAAGT ACAATGTTTCTCTTCCAGATTGTTATAGGGCTTTTTTACTGCACATAGGAAATGGCGGGATATCATATCAAAATTCTGCA GCGGGGCCTGGTTATGGAATATTTCCTTTTGGTGAAAATGTTGATGAATTTGTTTATTCTAATCCAGAGAATTGTTTAAG TCAGGATTGTTTCATTTATCCAAAAATGAGTGATGAATTTTGGGAAGAATCAATCAAAAATATTGAAGAGAACGATGATA TTTCCGAGGAAGATTTTGAAGCTGAACTAGGCAGAATATTTGCAGGAATTTTGCCTCTTGGAACAGAAGGCTGTACTTAC TATTATGGTCTTGTTTTAAATGGAAAATTTAAAGGAAGGGTTGTAAATGTAGATTTAGACAGACAGAAACCTTTTTTTGC TTTTGAGTCTAATTTTTTAGATTGGTACGAACGCTGGTTAGACGGAATTACGGCAGAAACTGCAATAGATGAAAAAGATT TGTTTAATTATACTTTGGGCGGATCGACAGCACATATTTTAGATGTATTTGTTACTACTGAAGATGAGGAAACAAAATTA GAATGTTTACAAGGTTTTTTAAAAAAGAAAAAGATTGATTCTCAAACATTAGATATTTTAGAAAAAGAATATAGTTTAAG TGCGGGTAAAATCCAGAAAAAACTTCTTCAAATACTTGTAAAGTTCGATTATAACCGCGCATATCCTTATTTAATAGATT GGGTTCAAAAAGATTTATTAAGTGTTTTTCAATTTGTATACTGGTATGCCAAAGACAGAAGTCTTGACTGGCTGGAAGTA ATTAAAGAAAATGCTTCAAAAATTAACGACGATGAGACTTTTAACTTCTGTACGTATTTATTAAAAGAAACAGGTACAGA TTATAGTTCAGTTATAATTTCATTCACTTCGCATAAAAATGCATCAATACGAGTAACTGCCTTTTTTGCGCTTGGGCAGT TAAAAAATAAGGTTGATTATTTAGAAACTTTTATTTTGGGTTTAAATGATGAAGTAAACAGAGTTGTTCATATTACATTA CAAGCTTTAGAAGGTGTCAACGAAAAAAAGCTTTTGCAGCATTATAAAAATATTGCTATACGGTTTCCAAAAGAACAAGA TTATATTTTAACAAATCTAAATCATAGACTTAAAGCTTTTGGATTAACAAATAAAACAATAAAAGGAATAGATCCTGATA ACTATTAA
Upstream 100 bases:
>100_bases GCAGATAGTGATTTGATTTTACCATTTTACGGAAAAAATATAATTCCTAATAAAGAAACTAAGTAATTTAGCACACTTAA TTTTCTCGTTTTAATAAAAT
Downstream 100 bases:
>100_bases AACAAAAGCCGATTTCTAATTTGAAATCGGCTTTTTGATGTCTGCAATTAAAATTTTTGAAGATTTTTATGATTGTGTTT TCGCTTATAATGCGATTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MNSEITYQIQRIKKKLLLAKEIDKDLEVFGADSHVYVLSETAAVDDIFEFEKKYNVSLPDCYRAFLLHIGNGGISYQNSA AGPGYGIFPFGENVDEFVYSNPENCLSQDCFIYPKMSDEFWEESIKNIEENDDISEEDFEAELGRIFAGILPLGTEGCTY YYGLVLNGKFKGRVVNVDLDRQKPFFAFESNFLDWYERWLDGITAETAIDEKDLFNYTLGGSTAHILDVFVTTEDEETKL ECLQGFLKKKKIDSQTLDILEKEYSLSAGKIQKKLLQILVKFDYNRAYPYLIDWVQKDLLSVFQFVYWYAKDRSLDWLEV IKENASKINDDETFNFCTYLLKETGTDYSSVIISFTSHKNASIRVTAFFALGQLKNKVDYLETFILGLNDEVNRVVHITL QALEGVNEKKLLQHYKNIAIRFPKEQDYILTNLNHRLKAFGLTNKTIKGIDPDNY
Sequences:
>Translated_455_residues MNSEITYQIQRIKKKLLLAKEIDKDLEVFGADSHVYVLSETAAVDDIFEFEKKYNVSLPDCYRAFLLHIGNGGISYQNSA AGPGYGIFPFGENVDEFVYSNPENCLSQDCFIYPKMSDEFWEESIKNIEENDDISEEDFEAELGRIFAGILPLGTEGCTY YYGLVLNGKFKGRVVNVDLDRQKPFFAFESNFLDWYERWLDGITAETAIDEKDLFNYTLGGSTAHILDVFVTTEDEETKL ECLQGFLKKKKIDSQTLDILEKEYSLSAGKIQKKLLQILVKFDYNRAYPYLIDWVQKDLLSVFQFVYWYAKDRSLDWLEV IKENASKINDDETFNFCTYLLKETGTDYSSVIISFTSHKNASIRVTAFFALGQLKNKVDYLETFILGLNDEVNRVVHITL QALEGVNEKKLLQHYKNIAIRFPKEQDYILTNLNHRLKAFGLTNKTIKGIDPDNY >Mature_455_residues MNSEITYQIQRIKKKLLLAKEIDKDLEVFGADSHVYVLSETAAVDDIFEFEKKYNVSLPDCYRAFLLHIGNGGISYQNSA AGPGYGIFPFGENVDEFVYSNPENCLSQDCFIYPKMSDEFWEESIKNIEENDDISEEDFEAELGRIFAGILPLGTEGCTY YYGLVLNGKFKGRVVNVDLDRQKPFFAFESNFLDWYERWLDGITAETAIDEKDLFNYTLGGSTAHILDVFVTTEDEETKL ECLQGFLKKKKIDSQTLDILEKEYSLSAGKIQKKLLQILVKFDYNRAYPYLIDWVQKDLLSVFQFVYWYAKDRSLDWLEV IKENASKINDDETFNFCTYLLKETGTDYSSVIISFTSHKNASIRVTAFFALGQLKNKVDYLETFILGLNDEVNRVVHITL QALEGVNEKKLLQHYKNIAIRFPKEQDYILTNLNHRLKAFGLTNKTIKGIDPDNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52529; Mature: 52529
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEITYQIQRIKKKLLLAKEIDKDLEVFGADSHVYVLSETAAVDDIFEFEKKYNVSLPD CCCCHHHHHHHHHHHHHHHHHHCCHHHEECCCCEEEEEECCHHHHHHHHHHHHCCCCCHH CYRAFLLHIGNGGISYQNSAAGPGYGIFPFGENVDEFVYSNPENCLSQDCFIYPKMSDEF HHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHCCCHHHHCCCCEEEECCCHHH WEESIKNIEENDDISEEDFEAELGRIFAGILPLGTEGCTYYYGLVLNGKFKGRVVNVDLD HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECEECCEEEEEEEC RQKPFFAFESNFLDWYERWLDGITAETAIDEKDLFNYTLGGSTAHILDVFVTTEDEETKL CCCCCEEEHHHHHHHHHHHHCCCCHHHCCCHHHHCEEECCCCCEEEEEEEEECCCCHHHH ECLQGFLKKKKIDSQTLDILEKEYSLSAGKIQKKLLQILVKFDYNRAYPYLIDWVQKDLL HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SVFQFVYWYAKDRSLDWLEVIKENASKINDDETFNFCTYLLKETGTDYSSVIISFTSHKN HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCC ASIRVTAFFALGQLKNKVDYLETFILGLNDEVNRVVHITLQALEGVNEKKLLQHYKNIAI CEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEHHHCCCCHHHHHHHHHCCEE RFPKEQDYILTNLNHRLKAFGLTNKTIKGIDPDNY ECCCCCCEEEECCCCHHHEECCCCCCCCCCCCCCC >Mature Secondary Structure MNSEITYQIQRIKKKLLLAKEIDKDLEVFGADSHVYVLSETAAVDDIFEFEKKYNVSLPD CCCCHHHHHHHHHHHHHHHHHHCCHHHEECCCCEEEEEECCHHHHHHHHHHHHCCCCCHH CYRAFLLHIGNGGISYQNSAAGPGYGIFPFGENVDEFVYSNPENCLSQDCFIYPKMSDEF HHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHCCCHHHHCCCCEEEECCCHHH WEESIKNIEENDDISEEDFEAELGRIFAGILPLGTEGCTYYYGLVLNGKFKGRVVNVDLD HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECEECCEEEEEEEC RQKPFFAFESNFLDWYERWLDGITAETAIDEKDLFNYTLGGSTAHILDVFVTTEDEETKL CCCCCEEEHHHHHHHHHHHHCCCCHHHCCCHHHHCEEECCCCCEEEEEEEEECCCCHHHH ECLQGFLKKKKIDSQTLDILEKEYSLSAGKIQKKLLQILVKFDYNRAYPYLIDWVQKDLL HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SVFQFVYWYAKDRSLDWLEVIKENASKINDDETFNFCTYLLKETGTDYSSVIISFTSHKN HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCC ASIRVTAFFALGQLKNKVDYLETFILGLNDEVNRVVHITLQALEGVNEKKLLQHYKNIAI CEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEHHHCCCCHHHHHHHHHCCEE RFPKEQDYILTNLNHRLKAFGLTNKTIKGIDPDNY ECCCCCCEEEECCCCHHHEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA