Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300313

Identifier: 146300313

GI number: 146300313

Start: 3042802

End: 3043722

Strand: Direct

Name: 146300313

Synonym: Fjoh_2558

Alternate gene names: NA

Gene position: 3042802-3043722 (Clockwise)

Preceding gene: 146300312

Following gene: 146300314

Centisome position: 49.91

GC content: 34.53

Gene sequence:

>921_bases
ATGAAAAAAATACTACTCTCGTTGCTGTTTGTAAGTTATTTGAATGTTGATGCTCAAAATCCAATTCAGGAGTTTAATTT
CAATGGAACTTTAAATAATACCTCTAATACAACTTCTTTCATGGGGACAAATGATTTTGTTGCTGATAGGACTGGAGCTG
TGGGAAAAGCCCAAAGACTAAACAATAAAGCGTTAGAAGCTGTAATAGATAATCTGCCTCAGGCTAATACAGCAAGAACA
ATAAGTATTTGGGTTAAATTTAATGATATTGCTTCGGCAAATTATATTTGGGGTTACGGCTCGGCTTATAATGCACAGTA
TTTTGGCTTATTGCAGCAAGGTACAACATCATCAAACTCAGATTTAAGTCTGGCAGGATGGGGAGCAAGTAATGATGTTA
TTGTTTCGACTCCATTAGCAAAAGGAATTTGGTACCAATACACGATAACATTTGATGGAACTGTTTCCAAAATGTATAGA
AATGGAGAATTGTTGAAGTATATAAGCGGTTTAAAGCGTTCTACAAACGGAAATATATTTAGATTAGGAGAAATCAATAC
ATTGGTAGGAATCAATGCTGATATAGACGATTTAAAGATTTATAATATTGCTTTGACAGATGATCAGGTTTTGGAGTCTT
ATAATAGCTCAAAACCACTTATTCCGGCGATTTCAGAAACAACAACTACAGCAAAAGCAGTAAAGGGAATAGCAAAAACT
AAAACCAATATTAAATCAGCAGGATCAGGTTCAATAATTGCAGCTGCTGATTTAAATGCGGGTTCAAAAAATATCGAAGT
GTTTTCACAAGGGCAGAAGGTACTGGGGAATAATAGTTCAATTACTATGAGCGATCTTCCGGAAGGAACTTATCTGTTGA
AAATAACAAATACACCAGGCAAGAAAATTACTTCGAAATAA

Upstream 100 bases:

>100_bases
TAGGTTACTTAACGAAGAAATTTTCGACGAACAGCATATTAACATAGATTAGCGGGTGTAAAATTAACACACTTAGTTTT
AACCCTTTAAATCTATTATC

Downstream 100 bases:

>100_bases
GGCATTACTTTAATTTTAAATAGTTAGTTAGTTTTTTTATATTTTTTAGCAGCAATCAGGTTTTGGAATACGAAAAAAGC
CTTCTGGAATTTCAGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKKILLSLLFVSYLNVDAQNPIQEFNFNGTLNNTSNTTSFMGTNDFVADRTGAVGKAQRLNNKALEAVIDNLPQANTART
ISIWVKFNDIASANYIWGYGSAYNAQYFGLLQQGTTSSNSDLSLAGWGASNDVIVSTPLAKGIWYQYTITFDGTVSKMYR
NGELLKYISGLKRSTNGNIFRLGEINTLVGINADIDDLKIYNIALTDDQVLESYNSSKPLIPAISETTTTAKAVKGIAKT
KTNIKSAGSGSIIAAADLNAGSKNIEVFSQGQKVLGNNSSITMSDLPEGTYLLKITNTPGKKITSK

Sequences:

>Translated_306_residues
MKKILLSLLFVSYLNVDAQNPIQEFNFNGTLNNTSNTTSFMGTNDFVADRTGAVGKAQRLNNKALEAVIDNLPQANTART
ISIWVKFNDIASANYIWGYGSAYNAQYFGLLQQGTTSSNSDLSLAGWGASNDVIVSTPLAKGIWYQYTITFDGTVSKMYR
NGELLKYISGLKRSTNGNIFRLGEINTLVGINADIDDLKIYNIALTDDQVLESYNSSKPLIPAISETTTTAKAVKGIAKT
KTNIKSAGSGSIIAAADLNAGSKNIEVFSQGQKVLGNNSSITMSDLPEGTYLLKITNTPGKKITSK
>Mature_306_residues
MKKILLSLLFVSYLNVDAQNPIQEFNFNGTLNNTSNTTSFMGTNDFVADRTGAVGKAQRLNNKALEAVIDNLPQANTART
ISIWVKFNDIASANYIWGYGSAYNAQYFGLLQQGTTSSNSDLSLAGWGASNDVIVSTPLAKGIWYQYTITFDGTVSKMYR
NGELLKYISGLKRSTNGNIFRLGEINTLVGINADIDDLKIYNIALTDDQVLESYNSSKPLIPAISETTTTAKAVKGIAKT
KTNIKSAGSGSIIAAADLNAGSKNIEVFSQGQKVLGNNSSITMSDLPEGTYLLKITNTPGKKITSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32989; Mature: 32989

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLSLLFVSYLNVDAQNPIQEFNFNGTLNNTSNTTSFMGTNDFVADRTGAVGKAQRL
CHHHHHHHHHHHHHCCCCCCCHHHCCCCCEECCCCCCEEECCCCCCCCCCCCCCCHHHHH
NNKALEAVIDNLPQANTARTISIWVKFNDIASANYIWGYGSAYNAQYFGLLQQGTTSSNS
HHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCCCCC
DLSLAGWGASNDVIVSTPLAKGIWYQYTITFDGTVSKMYRNGELLKYISGLKRSTNGNIF
CEEEEECCCCCCEEEECCCCCCEEEEEEEEECCHHHHHHCCCHHHHHHHHHCCCCCCCEE
RLGEINTLVGINADIDDLKIYNIALTDDQVLESYNSSKPLIPAISETTTTAKAVKGIAKT
EEECCEEEEECCCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
KTNIKSAGSGSIIAAADLNAGSKNIEVFSQGQKVLGNNSSITMSDLPEGTYLLKITNTPG
HCCCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCEEEECCCCCCEEEEEEECCCC
KKITSK
CCCCCC
>Mature Secondary Structure
MKKILLSLLFVSYLNVDAQNPIQEFNFNGTLNNTSNTTSFMGTNDFVADRTGAVGKAQRL
CHHHHHHHHHHHHHCCCCCCCHHHCCCCCEECCCCCCEEECCCCCCCCCCCCCCCHHHHH
NNKALEAVIDNLPQANTARTISIWVKFNDIASANYIWGYGSAYNAQYFGLLQQGTTSSNS
HHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCCCCC
DLSLAGWGASNDVIVSTPLAKGIWYQYTITFDGTVSKMYRNGELLKYISGLKRSTNGNIF
CEEEEECCCCCCEEEECCCCCCEEEEEEEEECCHHHHHHCCCHHHHHHHHHCCCCCCCEE
RLGEINTLVGINADIDDLKIYNIALTDDQVLESYNSSKPLIPAISETTTTAKAVKGIAKT
EEECCEEEEECCCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
KTNIKSAGSGSIIAAADLNAGSKNIEVFSQGQKVLGNNSSITMSDLPEGTYLLKITNTPG
HCCCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCEEEECCCCCCEEEEEEECCCC
KKITSK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA