| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300214
Identifier: 146300214
GI number: 146300214
Start: 2944416
End: 2944979
Strand: Reverse
Name: 146300214
Synonym: Fjoh_2459
Alternate gene names: NA
Gene position: 2944979-2944416 (Counterclockwise)
Preceding gene: 146300215
Following gene: 146300213
Centisome position: 48.3
GC content: 36.7
Gene sequence:
>564_bases ATGTTTGAACAATTAACCCAATTAGTACAGCAATATGGAGGCGATGCTGTTACAAACAATGCCGCTGTCCCAAATGAACA TAACGAAGCCGTAATAAATGAAACCAGCAGTTCTATTTTTGAAGGCTTAAAAAAAATTGCTTCAGAAGGCGGAGGTGAAC AACTTGCCGGATTATTTAATGGAAATTCCCCTATAGACAATTCAAATCCTGTTGTACAGCAGATCACACAACAATTATCC GGAAATTTAGGAGAAAAATTTGGTTTAAGCAGTACTGCTTCATCAGGTGTTGCTTCAAGTTTAATTCCACAGATTTTAGG CTCGCTGGTTAACAAAGCAAAAGATCCAAACGACAGCAGTTTTCAAATTTCAGATATAATTAATTCTATTTCTGGAAACA GTACACAAGCGTCTGGAATTATGGATACAATTTCAAAATATGGGGTTCAATTTGGACTTGACCAAAACAACGACGGAAAA CTAGACGTTGCCGATGTTCTTGTAGTAACCAAAAGTAAAGGCGGTATTGCAGGATTTATTGGTAAATTATTTGGAAGCAA GTAG
Upstream 100 bases:
>100_bases TTATAAATAAATCATTTGAAAAACATTTATTAACATCGTTTACTAAATCCCTTTCTTTTTTTGACTAAATTTGATTTCTA ATCCCTAATTTATCGAAATC
Downstream 100 bases:
>100_bases AACCGCTAAGGTTTTGAGATTTTAAGATACTGAGTTTTCAGTATCATTTATAAATAATTAAAAAGCTGTTTGTAAACCAA ACAGCTTTTTTAATTATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MFEQLTQLVQQYGGDAVTNNAAVPNEHNEAVINETSSSIFEGLKKIASEGGGEQLAGLFNGNSPIDNSNPVVQQITQQLS GNLGEKFGLSSTASSGVASSLIPQILGSLVNKAKDPNDSSFQISDIINSISGNSTQASGIMDTISKYGVQFGLDQNNDGK LDVADVLVVTKSKGGIAGFIGKLFGSK
Sequences:
>Translated_187_residues MFEQLTQLVQQYGGDAVTNNAAVPNEHNEAVINETSSSIFEGLKKIASEGGGEQLAGLFNGNSPIDNSNPVVQQITQQLS GNLGEKFGLSSTASSGVASSLIPQILGSLVNKAKDPNDSSFQISDIINSISGNSTQASGIMDTISKYGVQFGLDQNNDGK LDVADVLVVTKSKGGIAGFIGKLFGSK >Mature_187_residues MFEQLTQLVQQYGGDAVTNNAAVPNEHNEAVINETSSSIFEGLKKIASEGGGEQLAGLFNGNSPIDNSNPVVQQITQQLS GNLGEKFGLSSTASSGVASSLIPQILGSLVNKAKDPNDSSFQISDIINSISGNSTQASGIMDTISKYGVQFGLDQNNDGK LDVADVLVVTKSKGGIAGFIGKLFGSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19368; Mature: 19368
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQLTQLVQQYGGDAVTNNAAVPNEHNEAVINETSSSIFEGLKKIASEGGGEQLAGLFN CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC GNSPIDNSNPVVQQITQQLSGNLGEKFGLSSTASSGVASSLIPQILGSLVNKAKDPNDSS CCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FQISDIINSISGNSTQASGIMDTISKYGVQFGLDQNNDGKLDVADVLVVTKSKGGIAGFI EEHHHHHHHHCCCCCHHHHHHHHHHHHCEEECCCCCCCCCEEHHHEEEEECCCCCHHHHH GKLFGSK HHHHCCC >Mature Secondary Structure MFEQLTQLVQQYGGDAVTNNAAVPNEHNEAVINETSSSIFEGLKKIASEGGGEQLAGLFN CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC GNSPIDNSNPVVQQITQQLSGNLGEKFGLSSTASSGVASSLIPQILGSLVNKAKDPNDSS CCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FQISDIINSISGNSTQASGIMDTISKYGVQFGLDQNNDGKLDVADVLVVTKSKGGIAGFI EEHHHHHHHHCCCCCHHHHHHHHHHHHCEEECCCCCCCCCEEHHHEEEEECCCCCHHHHH GKLFGSK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA