| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300208
Identifier: 146300208
GI number: 146300208
Start: 2938040
End: 2938804
Strand: Reverse
Name: 146300208
Synonym: Fjoh_2453
Alternate gene names: NA
Gene position: 2938804-2938040 (Counterclockwise)
Preceding gene: 146300209
Following gene: 146300207
Centisome position: 48.2
GC content: 35.56
Gene sequence:
>765_bases ATGAATCAAAAAGAACTCAAAGAATTTCTCGACGAGAAAGTCATACAATATAACAATCAGGATTTTATAGAAAGTGATCC TGTTCAGATTCCACATTTATTTTCTCAAAAAGAAGACATTGAAATTGCAGGTTTTCTTAGTGCTTCAATCGCTTGGGGAA ACCGTAAAATGATCATCAAGAATTCACATAAAATGATGGAATTAATGGGCAATACGCCTTACGATTTCGTTATGTCACAT TCTGAAGATAATTTAGCCGATTTAGAAACGTTTGTTCACCGTACTTTCAACGGAAAAGATTTTGGAGGATTTATAAAAGG CTTAAAGCATATTTACCAAAACCATAACGGACTTGAAGCTGTTTTTGCTAAAAATCAGGAAAAAGACAGTCTGCAGAAAA GTATCAGCGAATTCAAAAAAATATTTTTTGAAACAGATCATTTAGCCCGAACTCAAAAACACATTTCAGATCCCCTAAAT AATTCGGCAGCAAAACGCATTAATATGTACCTGCGCTGGATGGTTCGCCAGGACACAAAAGGAGTCGATTTAGGAATCTG GAAAAGCATTTCACCAGCAGTTTTATCATGTCCGCTTGATGTACATTCCGGAAATGTAGCAAGAAAATTGGGCATTTTAG AACGAAAACAAAACGACGCAAAAGCTTTGGCAGAATTAGACAAAAAACTCCGCAAAATGGACGCTGCAGATCCTGTAAAG TATGATTTTGCTTTGTTTGGTTTAGGTGTTTTTGAAGGGTTTTAA
Upstream 100 bases:
>100_bases CTTTTGTAATCGTAACCCACAATGAGGAATTAGCCAATATGGCTGATAGAAAATTAATCATGGTCGACGGCCAGATTAGC AATTAAGCATTCCCATCAAA
Downstream 100 bases:
>100_bases AATTGAAAATCAAATAATTATCATTACAAATTATTAGATGATTCGAAAATTTTAGTGATCTAACCGTCATTTTAATGTAC ATTTGCACAAAATTTAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIKNSHKMMELMGNTPYDFVMSH SEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEAVFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLN NSAAKRINMYLRWMVRQDTKGVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK YDFALFGLGVFEGF
Sequences:
>Translated_254_residues MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIKNSHKMMELMGNTPYDFVMSH SEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEAVFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLN NSAAKRINMYLRWMVRQDTKGVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK YDFALFGLGVFEGF >Mature_254_residues MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIKNSHKMMELMGNTPYDFVMSH SEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEAVFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLN NSAAKRINMYLRWMVRQDTKGVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK YDFALFGLGVFEGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29099; Mature: 29099
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHEEECCCEEEEE NSHKMMELMGNTPYDFVMSHSEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEA CHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHH VFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLNNSAAKRINMYLRWMVRQDTK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC GVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK CCCEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH YDFALFGLGVFEGF HHHHHHHHHHHCCC >Mature Secondary Structure MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHEEECCCEEEEE NSHKMMELMGNTPYDFVMSHSEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEA CHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHH VFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLNNSAAKRINMYLRWMVRQDTK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC GVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK CCCEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH YDFALFGLGVFEGF HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA