Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300208

Identifier: 146300208

GI number: 146300208

Start: 2938040

End: 2938804

Strand: Reverse

Name: 146300208

Synonym: Fjoh_2453

Alternate gene names: NA

Gene position: 2938804-2938040 (Counterclockwise)

Preceding gene: 146300209

Following gene: 146300207

Centisome position: 48.2

GC content: 35.56

Gene sequence:

>765_bases
ATGAATCAAAAAGAACTCAAAGAATTTCTCGACGAGAAAGTCATACAATATAACAATCAGGATTTTATAGAAAGTGATCC
TGTTCAGATTCCACATTTATTTTCTCAAAAAGAAGACATTGAAATTGCAGGTTTTCTTAGTGCTTCAATCGCTTGGGGAA
ACCGTAAAATGATCATCAAGAATTCACATAAAATGATGGAATTAATGGGCAATACGCCTTACGATTTCGTTATGTCACAT
TCTGAAGATAATTTAGCCGATTTAGAAACGTTTGTTCACCGTACTTTCAACGGAAAAGATTTTGGAGGATTTATAAAAGG
CTTAAAGCATATTTACCAAAACCATAACGGACTTGAAGCTGTTTTTGCTAAAAATCAGGAAAAAGACAGTCTGCAGAAAA
GTATCAGCGAATTCAAAAAAATATTTTTTGAAACAGATCATTTAGCCCGAACTCAAAAACACATTTCAGATCCCCTAAAT
AATTCGGCAGCAAAACGCATTAATATGTACCTGCGCTGGATGGTTCGCCAGGACACAAAAGGAGTCGATTTAGGAATCTG
GAAAAGCATTTCACCAGCAGTTTTATCATGTCCGCTTGATGTACATTCCGGAAATGTAGCAAGAAAATTGGGCATTTTAG
AACGAAAACAAAACGACGCAAAAGCTTTGGCAGAATTAGACAAAAAACTCCGCAAAATGGACGCTGCAGATCCTGTAAAG
TATGATTTTGCTTTGTTTGGTTTAGGTGTTTTTGAAGGGTTTTAA

Upstream 100 bases:

>100_bases
CTTTTGTAATCGTAACCCACAATGAGGAATTAGCCAATATGGCTGATAGAAAATTAATCATGGTCGACGGCCAGATTAGC
AATTAAGCATTCCCATCAAA

Downstream 100 bases:

>100_bases
AATTGAAAATCAAATAATTATCATTACAAATTATTAGATGATTCGAAAATTTTAGTGATCTAACCGTCATTTTAATGTAC
ATTTGCACAAAATTTAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIKNSHKMMELMGNTPYDFVMSH
SEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEAVFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLN
NSAAKRINMYLRWMVRQDTKGVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK
YDFALFGLGVFEGF

Sequences:

>Translated_254_residues
MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIKNSHKMMELMGNTPYDFVMSH
SEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEAVFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLN
NSAAKRINMYLRWMVRQDTKGVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK
YDFALFGLGVFEGF
>Mature_254_residues
MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIKNSHKMMELMGNTPYDFVMSH
SEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEAVFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLN
NSAAKRINMYLRWMVRQDTKGVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK
YDFALFGLGVFEGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29099; Mature: 29099

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIK
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHEEECCCEEEEE
NSHKMMELMGNTPYDFVMSHSEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEA
CHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHH
VFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLNNSAAKRINMYLRWMVRQDTK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
GVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK
CCCEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH
YDFALFGLGVFEGF
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNQKELKEFLDEKVIQYNNQDFIESDPVQIPHLFSQKEDIEIAGFLSASIAWGNRKMIIK
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHEEECCCEEEEE
NSHKMMELMGNTPYDFVMSHSEDNLADLETFVHRTFNGKDFGGFIKGLKHIYQNHNGLEA
CHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHH
VFAKNQEKDSLQKSISEFKKIFFETDHLARTQKHISDPLNNSAAKRINMYLRWMVRQDTK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
GVDLGIWKSISPAVLSCPLDVHSGNVARKLGILERKQNDAKALAELDKKLRKMDAADPVK
CCCEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH
YDFALFGLGVFEGF
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA