| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is ypfH [C]
Identifier: 146300202
GI number: 146300202
Start: 2930563
End: 2931207
Strand: Reverse
Name: ypfH [C]
Synonym: Fjoh_2447
Alternate gene names: 146300202
Gene position: 2931207-2930563 (Counterclockwise)
Preceding gene: 146300203
Following gene: 146300201
Centisome position: 48.08
GC content: 33.49
Gene sequence:
>645_bases ATGAGTCTATCTTTAGAATACAAAATAAGAGAACCAAAAGTAATTTTAGATAAAAATCCGTTGTTGCTTTTATTACACGG ATACGGAAGCAATGAGGCTGATTTATTCTCATTTGCATCTGAACTTCCTGATAATTACTATATAATTTCGGCAAGAGCAC CTTATGATTTACAATATGGAGCTTATGCCTGGTACGCGATTAATTTTGATGCAGATCAGAATAAATTTTCAGACAATGAA CAAGCCAGAACTTCAAGAGATGTAATTGCAGGTTTTATTGATGAATTAGTGGCAAATTACCCTATTGATGCCAATAATGT GACTTTGATTGGTTTCAGCCAGGGATCAATTTTAAGCTATGCGGCAGCACTTTCTTATCCTGAAAAAATTCAGAGAGTTG TAGCAATGAGCGGTTATTTTAATGATGAAATTATAAAAGAAGGTTTTGAAAATAATGATTTCAAAAACCTAAAATTTTTC GCTTCACACGGAACTGTAGATCAGGTTATTCCAATTGAATGGGCTAGAAAAACCCCGGCAATTCTAGAAAAATTAAATAT TCCGGTTATGTATAAAGAATATCCTGTTGGTCACGGCGTTGCACCGCAGAATTTCTTTGATTTTAAAAATTGGTTAACAC TATAG
Upstream 100 bases:
>100_bases CTAATAACATCATCAACAAAGTTTGTTAAAGTTAACAACTAAAAATTGAGACTGCGACTGAAAATCAACAATTCACAATT TACAATTCACAATTAAAAAT
Downstream 100 bases:
>100_bases TTCATTGAAGGAAATATCTTTCATTTTAATTTAATTTTTCATTTTTAAGTTTTAACTTTGAAGCCAAAAAGTTGACTCAT TTGTATTGAGTTTACAATAA
Product: phospholipase/carboxylesterase
Products: alcohol; carboxylate
Alternate protein names: Phospholipase/Carboxylesterase Family Protein; Carboxylesterase; Serine Esterase; Esterase; COBF Protein; Phospholipase/Carboxylesterase Superfamily Protein; Phospholipase/Carboxylesterase Superfamily
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSLSLEYKIREPKVILDKNPLLLLLHGYGSNEADLFSFASELPDNYYIISARAPYDLQYGAYAWYAINFDADQNKFSDNE QARTSRDVIAGFIDELVANYPIDANNVTLIGFSQGSILSYAAALSYPEKIQRVVAMSGYFNDEIIKEGFENNDFKNLKFF ASHGTVDQVIPIEWARKTPAILEKLNIPVMYKEYPVGHGVAPQNFFDFKNWLTL
Sequences:
>Translated_214_residues MSLSLEYKIREPKVILDKNPLLLLLHGYGSNEADLFSFASELPDNYYIISARAPYDLQYGAYAWYAINFDADQNKFSDNE QARTSRDVIAGFIDELVANYPIDANNVTLIGFSQGSILSYAAALSYPEKIQRVVAMSGYFNDEIIKEGFENNDFKNLKFF ASHGTVDQVIPIEWARKTPAILEKLNIPVMYKEYPVGHGVAPQNFFDFKNWLTL >Mature_213_residues SLSLEYKIREPKVILDKNPLLLLLHGYGSNEADLFSFASELPDNYYIISARAPYDLQYGAYAWYAINFDADQNKFSDNEQ ARTSRDVIAGFIDELVANYPIDANNVTLIGFSQGSILSYAAALSYPEKIQRVVAMSGYFNDEIIKEGFENNDFKNLKFFA SHGTVDQVIPIEWARKTPAILEKLNIPVMYKEYPVGHGVAPQNFFDFKNWLTL
Specific function: Unknown
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.1
Molecular weight: Translated: 24334; Mature: 24202
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLEYKIREPKVILDKNPLLLLLHGYGSNEADLFSFASELPDNYYIISARAPYDLQYG CCCEEEEEECCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC AYAWYAINFDADQNKFSDNEQARTSRDVIAGFIDELVANYPIDANNVTLIGFSQGSILSY CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH AAALSYPEKIQRVVAMSGYFNDEIIKEGFENNDFKNLKFFASHGTVDQVIPIEWARKTPA HHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCEEEECHHCCCCHH ILEKLNIPVMYKEYPVGHGVAPQNFFDFKNWLTL HHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure SLSLEYKIREPKVILDKNPLLLLLHGYGSNEADLFSFASELPDNYYIISARAPYDLQYG CCEEEEEECCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC AYAWYAINFDADQNKFSDNEQARTSRDVIAGFIDELVANYPIDANNVTLIGFSQGSILSY CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH AAALSYPEKIQRVVAMSGYFNDEIIKEGFENNDFKNLKFFASHGTVDQVIPIEWARKTPA HHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCEEEECHHCCCCHH ILEKLNIPVMYKEYPVGHGVAPQNFFDFKNWLTL HHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: carboxylic ester; H2O
Specific reaction: A carboxylic ester + H2O = an alcohol + a carboxylate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA