| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yghO [H]
Identifier: 146300176
GI number: 146300176
Start: 2896132
End: 2897250
Strand: Reverse
Name: yghO [H]
Synonym: Fjoh_2421
Alternate gene names: 146300176
Gene position: 2897250-2896132 (Counterclockwise)
Preceding gene: 146300177
Following gene: 146300173
Centisome position: 47.52
GC content: 30.47
Gene sequence:
>1119_bases ATGATTACAATTAAAGAAGCCAAAACCAAAAAGGAATTAACTGAGTATATCAAATTTCCGTTTTCACTTTACAAAGACAA TCCATATTGGGTTCCTCCTATTATTGCTGATGAATTAGAATCATTTGATAAAACTAAAAATCCTGCTTTTGATAACGCCG AAGCTTATTTTTACCTTGCTTACAAAGACAATCAAATTGTTGGAAGAATAACAGCAATTATTAATTGGGCAGAAGTAAAC AATCAGCACAAGCGAAAAGTTCGTTTTGGATGGTTTGATGTTATTGATGATATTGAAGTAACAAAAGCACTTCTTGACAA AGTATTTGAATTAGGAAGAAAACACAATCTGGAACATGCAGAAGGTCCAATGGGATTTTCGAATCTGGATAAAGTGGGAG TTCTTACAGAAGGATATGATCAGGTTGGAACTATGATTACGTGGTACAACCACCCATATTATGTAACACATTTAGAACAA CTAGGATTTGCAGTAGAAAAACAATACATCGAAAGCATATTTCCTTTTTCGAATGTTAAACCTGAATTTTTCCAAAAAGC CCAGGAATTAATTAAAAAACGTTACGGACTAAAAGCGCTTAATTTTACAAAAACTAAAGACATTATGCCTCATGTAGACA AAATGTTTGATTTGTTTAATGAATCTTATGAAAAACTGGCTTCGTTTGTAGCGATTTCTGATGTTCAAAAAGAATATTTT AAAAAGAAATATATCAGTTTTATCAATCCGGAATATATAAAATTTGTAGTTGATAAAGATGATAATTTAGTAGCTTTCAG TATCGTAATGCCAAGTTTTACAGAAGCATTGCAAAAAATAAGAGGTAAATTATTTCCTTTTGGTTTTTTAAAGCTGCTAA AAGCAAAAAAACACAGTAAAGACGTAGTTTTTTATTTAATTGGAATTCGTCCGGAATATCAAAATAAAGGTGTTACAGCC ATTATTTTTGATGAGTATTATAAAACTTTTTCTGAAAAAGGAATTCAAAATTGCATTAGAACTCCTGAACTTTTGGAGAA TAATGCTATTCACTTACTTTGGAAAAACTTTGACCCAACGATTCATTGCCAGAGAAAGACTTATTTGAAGAATCTTTAA
Upstream 100 bases:
>100_bases AAAACCTATCGATTATCAGGAAAAAGAAAGAAAACGTAAAGCTAAGTACGAATAAAATAAACAATCAAATACCTCTGTAA AAAGAGCAAATACCAACTTA
Downstream 100 bases:
>100_bases AAAAGTTTTCTGTTCAACTTACGTGAACACTAAACACTTTGTTATAATATAAAAAAAATCCATTCGCCCCCAAAACGAAT GGATTTTTCACTTTATAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MITIKEAKTKKELTEYIKFPFSLYKDNPYWVPPIIADELESFDKTKNPAFDNAEAYFYLAYKDNQIVGRITAIINWAEVN NQHKRKVRFGWFDVIDDIEVTKALLDKVFELGRKHNLEHAEGPMGFSNLDKVGVLTEGYDQVGTMITWYNHPYYVTHLEQ LGFAVEKQYIESIFPFSNVKPEFFQKAQELIKKRYGLKALNFTKTKDIMPHVDKMFDLFNESYEKLASFVAISDVQKEYF KKKYISFINPEYIKFVVDKDDNLVAFSIVMPSFTEALQKIRGKLFPFGFLKLLKAKKHSKDVVFYLIGIRPEYQNKGVTA IIFDEYYKTFSEKGIQNCIRTPELLENNAIHLLWKNFDPTIHCQRKTYLKNL
Sequences:
>Translated_372_residues MITIKEAKTKKELTEYIKFPFSLYKDNPYWVPPIIADELESFDKTKNPAFDNAEAYFYLAYKDNQIVGRITAIINWAEVN NQHKRKVRFGWFDVIDDIEVTKALLDKVFELGRKHNLEHAEGPMGFSNLDKVGVLTEGYDQVGTMITWYNHPYYVTHLEQ LGFAVEKQYIESIFPFSNVKPEFFQKAQELIKKRYGLKALNFTKTKDIMPHVDKMFDLFNESYEKLASFVAISDVQKEYF KKKYISFINPEYIKFVVDKDDNLVAFSIVMPSFTEALQKIRGKLFPFGFLKLLKAKKHSKDVVFYLIGIRPEYQNKGVTA IIFDEYYKTFSEKGIQNCIRTPELLENNAIHLLWKNFDPTIHCQRKTYLKNL >Mature_372_residues MITIKEAKTKKELTEYIKFPFSLYKDNPYWVPPIIADELESFDKTKNPAFDNAEAYFYLAYKDNQIVGRITAIINWAEVN NQHKRKVRFGWFDVIDDIEVTKALLDKVFELGRKHNLEHAEGPMGFSNLDKVGVLTEGYDQVGTMITWYNHPYYVTHLEQ LGFAVEKQYIESIFPFSNVKPEFFQKAQELIKKRYGLKALNFTKTKDIMPHVDKMFDLFNESYEKLASFVAISDVQKEYF KKKYISFINPEYIKFVVDKDDNLVAFSIVMPSFTEALQKIRGKLFPFGFLKLLKAKKHSKDVVFYLIGIRPEYQNKGVTA IIFDEYYKTFSEKGIQNCIRTPELLENNAIHLLWKNFDPTIHCQRKTYLKNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43754; Mature: 43754
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIKEAKTKKELTEYIKFPFSLYKDNPYWVPPIIADELESFDKTKNPAFDNAEAYFYLA CEECCHHHHHHHHHHHHHCCHHEECCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEE YKDNQIVGRITAIINWAEVNNQHKRKVRFGWFDVIDDIEVTKALLDKVFELGRKHNLEHA EECCCHHHHHHHHEEHHHHCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGPMGFSNLDKVGVLTEGYDQVGTMITWYNHPYYVTHLEQLGFAVEKQYIESIFPFSNVK CCCCCCCCCCCCCCEECCHHHHCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCCCC PEFFQKAQELIKKRYGLKALNFTKTKDIMPHVDKMFDLFNESYEKLASFVAISDVQKEYF HHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKYISFINPEYIKFVVDKDDNLVAFSIVMPSFTEALQKIRGKLFPFGFLKLLKAKKHSK HHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC DVVFYLIGIRPEYQNKGVTAIIFDEYYKTFSEKGIQNCIRTPELLENNAIHLLWKNFDPT CEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCC IHCQRKTYLKNL EEECHHHHHCCC >Mature Secondary Structure MITIKEAKTKKELTEYIKFPFSLYKDNPYWVPPIIADELESFDKTKNPAFDNAEAYFYLA CEECCHHHHHHHHHHHHHCCHHEECCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEE YKDNQIVGRITAIINWAEVNNQHKRKVRFGWFDVIDDIEVTKALLDKVFELGRKHNLEHA EECCCHHHHHHHHEEHHHHCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGPMGFSNLDKVGVLTEGYDQVGTMITWYNHPYYVTHLEQLGFAVEKQYIESIFPFSNVK CCCCCCCCCCCCCCEECCHHHHCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCCCC PEFFQKAQELIKKRYGLKALNFTKTKDIMPHVDKMFDLFNESYEKLASFVAISDVQKEYF HHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKKYISFINPEYIKFVVDKDDNLVAFSIVMPSFTEALQKIRGKLFPFGFLKLLKAKKHSK HHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC DVVFYLIGIRPEYQNKGVTAIIFDEYYKTFSEKGIQNCIRTPELLENNAIHLLWKNFDPT CEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCC IHCQRKTYLKNL EEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]