| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300165
Identifier: 146300165
GI number: 146300165
Start: 2884404
End: 2885183
Strand: Reverse
Name: 146300165
Synonym: Fjoh_2410
Alternate gene names: NA
Gene position: 2885183-2884404 (Counterclockwise)
Preceding gene: 146300171
Following gene: 146300164
Centisome position: 47.32
GC content: 38.21
Gene sequence:
>780_bases ATGCCTTTAAGCAACTCAAAAGATTTAAAACTGGCAGTCCTGATTGATGCCGATAATGTGCCATACAGTAATGTGAAAGG TATGATGGAGGAAATTGCAAAATTTGGAACACCAACTACCAAAAGGATTTATGCAGACTGGACAAAGCCGAATGCAAATG GCTGGAAAGCCGTTTTACTAGAACATGCTATTACCCCCATACAGCAATATAGTTACACGGTTGGAAAAAATTCATCAGAT TCTGCGTTGATTATTGATGCTATGGATTTGCTGTATTCCGGGAAATTAGATGGTTTCTGCATCGTTTCCAGCGACAGCGA TTTTACCCGATTAGCGGTTCGATTAAGAGAATCCGGCATGAAAGTAATTGGTATTGGCGAAAAGAAAACCCCAAGTTCTT TTATCGTAGCCTGCGACCGTTTTATTTATATTGAGGTTTTGGATGGCGCAATTCAGAAGAAAAAACCAAAAGTAAACACA GCCGACACCAAAAAACCTGTGGAAAAACCTGCTGAAAAAGCACTTCATAAAGTAGATAAACAAACCATTGAACTTATTGA AGCTACAATTGAAGATATTGAAGATGATGACGGCTGGGCATTTCTAGGTGATGTCGGGAATCTGATTGTAAAGAAAAAAC CAGAATTTGACCCAAGAAATTATGGTTATTCTAAGCTTACGCCAATGCTGAAATCATTGACGGATATTTTGGAAATCGAC GAAAGAGAATCGGATAAAAAAGGCATAAAACACGTTTATGTGCGTTTACGATTCAACTAA
Upstream 100 bases:
>100_bases ACTAATTAGTACTGAAAAAACTACTTATTCGGCTTTGACTTTCTATAAAAACCAATTTTAATTTTAACTTTGAGAGTATT TAATTTTCTAATATCTAAAT
Downstream 100 bases:
>100_bases TTAATTTATTACCCTATTATTATTTAAAAACATGAGAAAGAAATTCTTTATTTACGGATTCTTATTGTTTCTAATTGTTG CTGCAATTTATTATTACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPLSNSKDLKLAVLIDADNVPYSNVKGMMEEIAKFGTPTTKRIYADWTKPNANGWKAVLLEHAITPIQQYSYTVGKNSSD SALIIDAMDLLYSGKLDGFCIVSSDSDFTRLAVRLRESGMKVIGIGEKKTPSSFIVACDRFIYIEVLDGAIQKKKPKVNT ADTKKPVEKPAEKALHKVDKQTIELIEATIEDIEDDDGWAFLGDVGNLIVKKKPEFDPRNYGYSKLTPMLKSLTDILEID ERESDKKGIKHVYVRLRFN
Sequences:
>Translated_259_residues MPLSNSKDLKLAVLIDADNVPYSNVKGMMEEIAKFGTPTTKRIYADWTKPNANGWKAVLLEHAITPIQQYSYTVGKNSSD SALIIDAMDLLYSGKLDGFCIVSSDSDFTRLAVRLRESGMKVIGIGEKKTPSSFIVACDRFIYIEVLDGAIQKKKPKVNT ADTKKPVEKPAEKALHKVDKQTIELIEATIEDIEDDDGWAFLGDVGNLIVKKKPEFDPRNYGYSKLTPMLKSLTDILEID ERESDKKGIKHVYVRLRFN >Mature_258_residues PLSNSKDLKLAVLIDADNVPYSNVKGMMEEIAKFGTPTTKRIYADWTKPNANGWKAVLLEHAITPIQQYSYTVGKNSSDS ALIIDAMDLLYSGKLDGFCIVSSDSDFTRLAVRLRESGMKVIGIGEKKTPSSFIVACDRFIYIEVLDGAIQKKKPKVNTA DTKKPVEKPAEKALHKVDKQTIELIEATIEDIEDDDGWAFLGDVGNLIVKKKPEFDPRNYGYSKLTPMLKSLTDILEIDE RESDKKGIKHVYVRLRFN
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29035; Mature: 28904
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSNSKDLKLAVLIDADNVPYSNVKGMMEEIAKFGTPTTKRIYADWTKPNANGWKAVLL CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH EHAITPIQQYSYTVGKNSSDSALIIDAMDLLYSGKLDGFCIVSSDSDFTRLAVRLRESGM HHHCCHHHHHEEECCCCCCCCEEEEEHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC KVIGIGEKKTPSSFIVACDRFIYIEVLDGAIQKKKPKVNTADTKKPVEKPAEKALHKVDK EEEECCCCCCCCHHEEHHHHEEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QTIELIEATIEDIEDDDGWAFLGDVGNLIVKKKPEFDPRNYGYSKLTPMLKSLTDILEID HHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC ERESDKKGIKHVYVRLRFN CCCCHHCCCEEEEEEEEEC >Mature Secondary Structure PLSNSKDLKLAVLIDADNVPYSNVKGMMEEIAKFGTPTTKRIYADWTKPNANGWKAVLL CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH EHAITPIQQYSYTVGKNSSDSALIIDAMDLLYSGKLDGFCIVSSDSDFTRLAVRLRESGM HHHCCHHHHHEEECCCCCCCCEEEEEHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC KVIGIGEKKTPSSFIVACDRFIYIEVLDGAIQKKKPKVNTADTKKPVEKPAEKALHKVDK EEEECCCCCCCCHHEEHHHHEEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QTIELIEATIEDIEDDDGWAFLGDVGNLIVKKKPEFDPRNYGYSKLTPMLKSLTDILEID HHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC ERESDKKGIKHVYVRLRFN CCCCHHCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA